G510845



Basic Information


Item Value
gene id G510845
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000352
NCBI id null
chromosome length 2255705
location 813169 ~ 814059 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU585716
GGAGAGCGAAGAGTTAGCCCCGCCCTACGATCGGGGCTGTGCGAGAGAGAAGACGAAGCGAGAATGCGCGATGCGAGAGAGAGAAACAGCAGTTCCGACGTGGTCCTGAAAAAGAAGAAGAAACAGAATTAGAACACATAAATTAGCAGTTAAGAGAAATAACAGAGTTTGAGAGGAAAAAATGTGAATTGAACGTTGTCAGTCGATTATCACGGTTGATGCTAGCGCAAACTGTTACAGAGGAGAGACAAACTTCCAGAGGTTGGAGTTTGGCTGTCTGGAAACTTCATAACTAGAAAATTTGAATTCTCTTGGTTGGGTTTTTTTTTTTTCCTGTCCTTCCTTTCCCTATGTTCTGTTTTTCCATCATCCCTTGAGTCGGGTGCAGCATATTTTCTGGAACCGGACGATCGCGAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU585716 True 417 lncRNA 0.44 2 813169 814059

Neighbor


gene id symbol gene type direction distance location
CI01000352_00574884_00583420 NA coding downstream 229749 574858 ~ 583420 (-)
CI01000352_00564738_00564956 NA coding downstream 248213 564631 ~ 564956 (-)
CI01000352_00558495_00562831 HSC70, HSPA8, HSPA1A, HSPA1A.L, HSP70, HSP70-3 coding downstream 250216 558495 ~ 562953 (-)
CI01000352_00553364_00555334 NA coding downstream 257805 553204 ~ 555364 (-)
CI01000352_00549005_00551748 CTRL coding downstream 261395 548979 ~ 551774 (-)
CI01000352_00853555_00911922 SLC24A2 coding upstream 39496 853555 ~ 911922 (-)
CI01000352_00936770_00961973 NA coding upstream 122687 936746 ~ 961973 (-)
CI01000352_00969428_00970236 NA coding upstream 155164 969223 ~ 970236 (-)
CI01000352_00980253_00998005 NA coding upstream 166111 980170 ~ 998272 (-)
CI01000352_01015676_01018437 NA coding upstream 201602 1013901 ~ 1018437 (-)
G510846 NA non-coding downstream 239 812467 ~ 812930 (-)
G510848 NA non-coding downstream 840 811953 ~ 812329 (-)
G510844 NA non-coding downstream 17932 794990 ~ 795237 (-)
G510841 NA non-coding downstream 20198 792693 ~ 792971 (-)
G510774 NA non-coding downstream 75462 733906 ~ 737707 (-)
G510851 NA non-coding upstream 3267 817326 ~ 817674 (-)
G510820 NA non-coding upstream 7774 821833 ~ 822131 (-)
G510998 NA non-coding upstream 184893 998952 ~ 999156 (-)
G511000 NA non-coding upstream 186798 1000857 ~ 1001094 (-)
G511005 NA non-coding upstream 197188 1011247 ~ 1011621 (-)
CI01000352_00081761_00086027 NA other downstream 722511 80953 ~ 86080 (-)
G510953 NA other upstream 155374 972660 ~ 997817 (-)
G511618 NA other upstream 1261474 2075533 ~ 2085310 (-)

Expression



Co-expression Network