XLOC_013975 (CR382334.1)


Basic Information

Item Value
gene id XLOC_013975
gene name CR382334.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 17640090 ~ 17644116 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027903
ATGCCACCAAGAGAACACCCTTGTGCTATTTTAGGATGTAAGGCTCAGCACAAGACAAATGAGCAACAGAGGCTTAAGTGGCTGAGTTTTATCTTTGAAGACAAGGTGCCTGAAAATGTACCAAAACTGTTGTATGTTTGCGCTAACCACTTTAGCGTAGACTGCCTCGAGAACGCGGGACAATACAACTCCGGATTCGCgagtaaattgtttttgaaaactggaTCAGTTCCTACAATACGTGATCCTGCCTCACATCAAGCCACGACGTCGACAAAGAGCAACAAGGTGGATGTTGCTTGCCAGACAGAAACTTTTCACACATCTTTACACAGTGTTGGTACCCAGTTGTGTTTAAGGACGCTTCAGGCTAAATGCAGGAGTACAAGTGTCCAGACAACAGTATCCAGTTTTGAACTGACTGTACCATCAGCGTCCTCTACTGCGTTTATGACTTCAACACCCCTCAAACCTTCACTAAAAAGACCTCGTCTGGAGCTggaggagaaggagaaggaggaggaggaagaaaaaGAAGCCGAAGAGACTTTGACAGAGTCAAAAATTATAGCCCAAGACTCGGATGTGACATTTGACCCTGCAGAGGAATGCACATCTGCAACTGAACCAACAGACTTGTCaatccAAGAATGCCCAGTTCATAACATTGCCAAGTTCATTGTCTATGAAACATGCCTCATGGAGCTCTTCAGTGACTGCCCAGTGTTGCAGAGGAGATGTGATGTAAAGTCACAAAGGCTTGGGACATTTCTGAGCGTACAGCAAGTCTGCCCACACTGCGAGTTTGTAAGAAAATGGAACAGTCAGCCAATTATTGGTAGTACTCCAGCTGGCAACCTGCATCTTTCTGCTGCAGTCTACTTGAGCGGTGCATCATTTTTTGTAGTTGAAAAGGTATTTGCTGCAATGaaactacacatttttaaatataattcatttcgCCGTCATGCAAGACTTTGCATTGAACCTgctattgtccacaagtggagaAATTGGCAGAGTGAAATGCTAGAACAAGAGAATGTGATTGTTGGAGGAGATATGAGGGCTGACTCCCCAGGTCACTCGGCCAAGTATGGGAGTTATACAATGATGGACCTTGCAACTAACACAGTGGTCGACCTACAGTTAGTCCAGagTAATGAGGTGGGCGGCAGTTACCATATGGAAAAAGAAGGCCTAAAGAGAAGCCTTGACCTGTGGGATGCCCGCGGTGTTCATCTGGAATGCATCATCACAGACCGACATCCTCAAATACAGAAATATCTCAGGGATCGAAATGTCACTCAGTTTTACGATGTGTGGCATATCGAGAAAGGAATTTTCAAAAAACTGGACAAGATATGCCAGATAAAGGGGTGTGAGAAGTTGCGTAAATGGTTACGTAGCATCAAAAACCACATCTACTGGACTGCTGCATCATCCACAACAGGTCCTGAAAGAGTGGCAAAGTGGACCTCTATCTTAAACCATGTACAAGACAAACATGTACATGAAGACCCCAATTTTCTGGCTTGTCTGCATCCGCAACGGATAAGCAGAGACAAGAACAAATGGCTGTCGGCTGCAACGATGCCATACTACAAGCTGGAGAAAGTTCTCGCTAACAAGAGAATATTGAAGGATGTGGCCAAGCTAAGTCCTCACCACCAGACATCAACTGTTGAAGCTTTCCACAGCGTCATACTGCGGTTTGCACCCAAAAATGTGGTATTACCATTTCTGGGGATGCTATGCAGgtTGTACTTGGCTGCACTGCATTACAATGAAAATGCCGGGCGTCCCCAGGCCACATCAGCAACTGGTAAACCTATTTACAAGCTTGCCTTTCCAAAGGCAAAGAAAGGAGAGTATAGGGTCCGAGAAGTGAAGACGCAGCAAACTTTCggtatgtatataaatgtttatagtattattaataattcaataaataaaaaaaataattgcactttacaTTCACAATGA
>TCONS_00027904
ATGCTAGAACAAGAGAATGTGATTGTTGGAGGAGATATGAGGGCTGACTCCCCAGGTCACTCGGCCAAGTATGGGAGTTATACAATGATGGACCTTGCAACTAACACAGTGGTCGACCTACAGTTAGTCCAGagTAATGAGGTGGGCGGCAGTTACCATATGGAAAAAGAAGGCCTAAAGAGAAGCCTTGACCTGTGGGATGCCCGCGGTGTTCATCTGGAATGCATCATCACAGACCGACATCCTCAAATACAGAAATATCTCAGGGATCGAAATGTCACTCAGTTTTACGATGTGTGGCATATCGAGAAAGGAATTTTCAAAAAACTGGACAAGATATGCCAGATAAAGGGGTGTGAGAAGTTGCGTAAATGGTTACGTAGCATCAAAAACCACATCTACTGGACTGCTGCATCATCCACAACAGGTCCTGAAAGAGTGGCAAAGTGGACCTCTATCTTAAACCATGTACAAGACAAACATGTACATGAAGACCCCAATTTTCTGGCTTGTCTGCATCCGCAACGGATAAGCAGAGACAAGAACAAATGGCTGTCGGCTGCAACGATGCCATACTACAAGCTGGAGAAAGTTCTCGCTAACAAGAGAATATTGAAGGATGTGGCCAAGCTAAGTCCTCACCACCAGACATCAACTGTTGAAGCTTTCCACAGCGTCATACTGCGGTTTGCACCCAAAAATGTGGTATTACCATTTCTGGGGATGCTATGCAGgtTGTACTTGGCTGCACTGCATTACAATGAAAATGCCGGGCGTCCCCAGGCCACATCAGCAACTGGTAAACCTATTTACAAGCTTGCCTTTCCAAAGGCAAAGAAAGGAGAGTATAGGGTCCGAGAAGTGAAGACGCAGCAAACTTTCgGTTATGTAGAAGAGCTGCTGGACCTCATCTTCAACCAAGTGTTTGTGGACCCATCACCCTATGTTGATGAAGTGTTGGGAATTCACAAACCACCTGCTCTATCATCAGCCTACGATAGACCTGAGATGGAGGAGGCTATCTCCAGCAGGGTGACCCGCTTCAATCAATAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000107952

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027903 False 1986 mRNA 0.44 12 17640090 17643886
TCONS_00027904 True 1053 mRNA 0.46 8 17642356 17644116

Neighbor

gene id symbol gene type direction distance location
XLOC_013974 nr1d2b coding upstream 232975 17400263 ~ 17407115 (+)
XLOC_013973 rpl15 coding upstream 244503 17385561 ~ 17395587 (+)
XLOC_013971 ube2e1 coding upstream 264049 17358850 ~ 17376041 (+)
XLOC_013972 FO704764.1 coding upstream 266404 17373632 ~ 17373686 (+)
XLOC_013970 NA coding upstream 285422 17353640 ~ 17354668 (+)
XLOC_013976 NA coding downstream 202552 17846668 ~ 17846933 (+)
XLOC_013977 NA coding downstream 518726 18162842 ~ 18173519 (+)
XLOC_013978 NA coding downstream 649252 18293368 ~ 18297911 (+)
XLOC_013979 BX649471.1 coding downstream 724753 18368869 ~ 18381684 (+)
XLOC_013980 fkbp10a coding downstream 849666 18493782 ~ 18597568 (+)
XLOC_013968 CR318590.2 non-coding upstream 730603 16907709 ~ 16909487 (+)
XLOC_013967 NA non-coding upstream 927791 16711826 ~ 16712299 (+)
XLOC_013965 CR385068.4 non-coding upstream 1570987 16068970 ~ 16069103 (+)
XLOC_013986 NA non-coding downstream 1188893 18833009 ~ 18834609 (+)

Expression


Co-expression Network