XLOC_001406


Basic Information

Item Value
gene id XLOC_001406
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 41599218 ~ 41608702 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00002970
gcagggggtgctcatcCTCATTGCCACAAAAATGGGGACACTGTTATCTGGTTGGAAGCACAATGGGATCGTCTCGTCCTCACCTATAATGGCCTCCAAATTATCCCTTTCACTGACCTGTCTCTATCAAGGTCTCTCTCTCCACCAACATCTTGTGTGGTGAGTGAACTGGCTGTTCGGTCCTGTGGCTGCAGTCATATCATCCAGACTGTTCACACCTCGTGTTTTCAGGCCTCTCCTCTTTAATAATGAGAACATCTGGCTCTCC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00002970 True 268 lncRNA 0.49 2 41599218 41608702

Neighbor

gene id symbol gene type direction distance location
XLOC_001405 NA coding downstream 8084 41588155 ~ 41591134 (-)
XLOC_001404 NA coding downstream 65730 41532664 ~ 41533488 (-)
XLOC_001403 NA coding downstream 105737 41491301 ~ 41493481 (-)
XLOC_001401 htt coding downstream 225101 41293964 ~ 41374117 (-)
XLOC_001402 CR974461.2 coding downstream 287326 41311777 ~ 41311892 (-)
XLOC_001408 NA coding upstream 148354 41757056 ~ 41761162 (-)
XLOC_001409 rnf24 coding upstream 162140 41770842 ~ 41817784 (-)
XLOC_001410 NA coding upstream 266235 41874937 ~ 41876777 (-)
XLOC_001411 adra1d coding upstream 348508 41957210 ~ 41982582 (-)
XLOC_001412 BX927206.1 coding upstream 668821 42277523 ~ 42277650 (-)
XLOC_001394 NA non-coding downstream 934513 40648878 ~ 40664705 (-)
XLOC_001415 CR925858.1 non-coding upstream 1366058 42974760 ~ 42974875 (-)
XLOC_001416 NA non-coding upstream 1522188 43130890 ~ 43155453 (-)

Expression


Co-expression Network