XLOC_014133


Basic Information

Item Value
gene id XLOC_014133
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 30969012 ~ 30970025 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029725
GGCTAAGAATAACAGAGCTAATAGTGATGTCATATCTCGTGGGAATCAGTGGCAAGGGATCTGTTACTGGCTCATCTGGTTTCCTTTTGAATCCTGGCTGACGGTGAGCTCACTCAGAGATGTGAACGCTGCCGCTCCGACAACTTCCTCTGAGGTGTGTGACCATTGGTCTAGAAGGTCGTCTAGAtggggttgtggctgaaaggac

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029725 True 208 lncRNA 0.50 2 30969012 30970025

Neighbor

gene id symbol gene type direction distance location
XLOC_014132 yars1 coding upstream 73739 30884706 ~ 30895273 (+)
XLOC_014131 mfsd2ab coding upstream 84958 30867845 ~ 30884054 (+)
XLOC_014130 NA coding upstream 125779 30841639 ~ 30843233 (+)
XLOC_014129 NA coding upstream 132807 30832290 ~ 30836205 (+)
XLOC_014128 NA coding upstream 167024 30800052 ~ 30801988 (+)
XLOC_014134 sync coding downstream 20104 30990129 ~ 30997794 (+)
XLOC_014135 ankmy2b coding downstream 72977 31043002 ~ 31054326 (+)
XLOC_014136 sostdc1b coding downstream 91693 31061718 ~ 31063020 (+)
XLOC_014137 NA coding downstream 168802 31138827 ~ 31153090 (+)
XLOC_014138 NA coding downstream 187622 31157647 ~ 31218099 (+)
XLOC_014127 NA non-coding upstream 243309 30724996 ~ 30725703 (+)
XLOC_014125 CU463182.1 non-coding upstream 337952 30630943 ~ 30631060 (+)
XLOC_014139 NA non-coding downstream 280895 31250920 ~ 31348348 (+)
XLOC_014144 BX957279.1 non-coding downstream 621499 31591524 ~ 31591540 (+)
XLOC_014146 NA non-coding downstream 830480 31800505 ~ 31859540 (+)

Expression


Co-expression Network