CI01180000_07935855_07937319


Basic Information

Item Value
gene id CI01180000_07935855_07937319
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 7935713 ~ 7937577 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01180000_07935855_07937319.mRNA
GGTGCATTTTGTCTTGTTTCTTTTTTTTTTTCCAACTGTTTATACTTAAAACAAGTGAAAAAATCTGTTAAAAACTGAAAATCTAACTGGAAATTATGTGTGTGTGATTGAATGAGTAAGAGACTCTTGCTAATCTCTAATCAATATAGTGCAATACAAATCTACTATACTTTGACCTTTCTTGACATTTCTTTACAGAAATCGCTCAGTCATTTTGATAGTCTTACAGAGAAGCGCCGTGAGCTCCGCTTGTAGAGATGCAAGATGGTGATGACGATAAGATGTGTGTACTGTCCAGGAACGAAATGGATGTTCCCTTCAATCTGTCCCTCTCTAATCTCTCACTTTCCGTCTCCCCAACATCTCCGCCTCTGGATCTTCAACATCCCCTCCCGACCATCATCATCATCGTGTGTCTCTTCGTTCTGTTCGGGGGCTGTGTGATCTTTCTGGCGGTGGGCTGCTCGCCAGGAGGGTCCTGGGGTGTGGATGGGGACTGTGGCCCGGCGGACGGTCTCTCGTGTGAGCAGACTCTGTCCAGTGAGCCCCAGCTGAAGCTCTGGAAGCGCTTGGGCTCTATGAGGCAGTCGTTCTCCTCCGCGCCAGCATTCAGAAGACCCGTTCAGCCATACGTAGCCCAGAGCAGGAAGCAATCAGGGTCAATGCCGCTCGCAGAGTCAAAGACAAACGACTCCCACACTTATATTACTATACCGTCTCTGCTGCAGTATGCCACAGAGATTTGAACTCTGTTGCAAAACCTAGTGAGTCGCCTTGCAGTCTAGTGCCTACATAGGCAGCTGCCTTTTAAGCGACTGATTTGAAGTACACTTCATAAGAAGCAACTCCAGCTACAGGAAACTAGACTTAAAATTTATTCCCAAAAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01180000_07935855_07937319.mRNA True 889 mRNA 0.46 2 7935713 7937577

Neighbor

gene id symbol gene type direction distance location
CI01180000_07713320_07727939 CAPN2, CAPN2A coding downstream 207513 7712374 ~ 7728200 (-)
CI01180000_07696310_07709917 CAPN1A, CAPN11 coding downstream 225796 7696310 ~ 7709917 (-)
CI01180000_07691853_07694359 NA coding downstream 241348 7691756 ~ 7694365 (-)
CI01180000_07664300_07675535 LRRFIP2 coding downstream 260178 7663854 ~ 7675535 (-)
CI01180000_07634809_07642632 NA coding downstream 292694 7633985 ~ 7643019 (-)
CI01180000_07958912_07969452 NA coding upstream 21162 7958739 ~ 7969452 (-)
CI01180000_07995410_08004464 IF3EI, EIF3L, EIF3S6IP coding upstream 57610 7995187 ~ 8004777 (-)
CI01180000_08007547_08008834 NA coding upstream 69158 8006735 ~ 8008856 (-)
CI01180000_08123227_08149912 ABLIM1A coding upstream 185523 8123100 ~ 8149912 (-)
CI01180000_08176665_08187246 FAM160B1 coding upstream 239047 8176624 ~ 8187246 (-)
G684189 NA non-coding downstream 17548 7917890 ~ 7918165 (-)
G684186 NA non-coding downstream 20399 7914706 ~ 7915314 (-)
G684185 NA non-coding downstream 21359 7914057 ~ 7914354 (-)
G684184 NA non-coding downstream 23214 7912209 ~ 7912499 (-)
G684183 NA non-coding downstream 23938 7911563 ~ 7911775 (-)
G684200 NA non-coding upstream 32386 7969963 ~ 7973205 (-)
G684215 NA non-coding upstream 68374 8005951 ~ 8024223 (-)
G684234 NA non-coding upstream 221739 8159316 ~ 8163522 (-)
G684231 NA non-coding upstream 231990 8169567 ~ 8175328 (-)
G684265 NA non-coding upstream 260854 8198431 ~ 8198654 (-)
G684182 NA other downstream 24505 7910761 ~ 7911208 (-)
G684080 NA other downstream 352910 7579404 ~ 7582803 (-)
G684071 NA other downstream 410059 7506890 ~ 7525654 (-)
G684018 NA other downstream 522581 7403147 ~ 7413132 (-)
G683673 NA other downstream 1172869 6762075 ~ 6762844 (-)
G684493 NA other upstream 785116 8722693 ~ 8723867 (-)
G684929 NA other upstream 1960847 9895316 ~ 9901388 (-)
G686052 NA other upstream 3404039 11341616 ~ 11343496 (-)

Expression


Co-expression Network