CI01180000_07634809_07642632


Basic Information

Item Value
gene id CI01180000_07634809_07642632
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 7633985 ~ 7643019 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01180000_07634809_07642632.mRNA
TTCATAGAGTGAGTTAGTAGCATCCATTCTTAGTTGTGTCATTGGATGACAAAACATTTAAAAACTGAAAGAAAAAATGTTCTCTGTCGAAATAGATTTTGGAATAAGTTCAAATAAAAAGAAAAGAGACCTAAAAGGCCTCCTACATGTTTTCATTTGAAACAGTATTTTTTTTTAAATTAAATCAGATTGTAAATGTATACAGAGTATTTTTTATAGTTTATTCAAAAATATGTGCATCACAATCTATGCACATGTTTACTTCTCACATGTTGATGCACTGTTGATGAGTGGCTGCCCTCATGTGGAATTAATGTACATGATCTTTTTTTTCTTTTTTCTGATGATAATCTCTAAACTCTGTCTCTACTGATCAAGGTGTAAATATGGCTCATCGTTCTCAGTGCTCCTCTGCCGGGGACAACCCCCTGGACCCCAACTACCTGCCCCCTCACTACCGTGAGGAATACCGAATGGCTATCGACGCCCTGGTTGACACTGACTTGGAGGGCTACTATGCGTTTCTTAAGATGGCAGATGTGGTTGATTTCTTATCCCGTACAGAGATTGAGTATATCAAATGCAATGTGCAAGCTCCATACCAGACCGCCAAACTAGAGAAGAGATGCATGACTGAAGATGTAGATGGTTCTTCTGACACTTACTGGCCGGTACATTCAGACCACGATGCTCCGGGCCTTGACTTAGGCTGGCCACAGCAATACAGATTTGTTGGACCTACTGAGGTCACTACTTTGGTGAACCCGCCTGACCCCGAGATGCCCAGTATTAAAGAGCAAGTCCGCAGAATGATCAAGAGTGCACAACAAGTTATCGCTGTGGTGATGGATATGTTTACAGATGTTGACATCTTTGCTGATATCCTTGGTGCAGCGACACGTGGTGTGGCTGTTTATGTTCTGCTTGATGAACTGAATGCTCAACATTTTGTTGCGATGGTGAACAACTGTAGGGTGAATCTGGATGAGATAAAAGTCATGCGGGTAAGAACTGTGTCTGGTAGTACCTATTCCTGCCGCACAGGGAAGAACTTCAAAGGTCAGATGATGAGTCGCTTTATACTGGTAGACTGCAGAGCTGTTTTAAGTGGCAACTATAGGTTCATGTGGTCTTTTGAGAAGATACATCGTTGCCTTGCTCATCTGTTTCTGGGACAGCTTGTAACCACCTTTGATGAAGAGTTTCGGATTCTGTTTGCCCATTCAGAGCCACTGGTTGTTGAAAATGTTTTGGCAAATATGCCACACTATGACAGGGAACCTGAAGGCTACTACAAGACAGAAAAGACCCACATGTTTAACAGACAATATCCAGCTATGGGTATGGAATGGGCTGAACGCACTGCAGAAGAGCATTTGAATGTGGGTCACAAAATGTTACCCTTTAGGAGTGAATCCATCCACAGTGCAGGAGAAGCAAATCCTTCTGTTCAGAGGCACATGAACCTGCATGCTGGTCAACAATATAGAGGGGGCCATCAATTTATAGAGCATGGAAGGCAAATGAGAGGACCAAATGAAATGGTTGGCTTAAAAAGGCATAGCTACGGAAATATACCTGATTATGAATACCTGCCTCCTCAAAACCATCCAACAATGAAAGGAAACCAGTACATGGAGGGAGCTGTGCTCCAGGGTGGCCATTTTGCAAGGGATCCAAATATTTACCAGGGAGCTGGATTACAATCTGGTTATGACATGTATGGGAAGTTTACAGGCCAAGGCCAAAACATTGATCAGTTTTCAGGGTCTAGCTACCCTCATGGGGGAGATGAGGCTGAACCAACTGGAGCTTACGACCATGTTCAAAGATACCTGCAGTCTCACTCGGCTATGGAGGAAGAATATGGTCCAAGAATTGTATTGCCACCTGTGCAGTCTAATATTAAGAGACATAGCAGGGGTCAGTCTTATACCTGTCAGACCTCACCAACACAACCAAACCTGCCAGAACAGAAACGTTTCTTTAATGTAAACCGCAAACCACAGGATATGAGTCAAAAGCAAGGCCTGCGGGACTGGAGGATCAGCTCGTACCTTAGTGCATATGATGATGCAGGAGAACTGGATTTAGCTGAACTTGAAGGATCCAGCGCATGTGGTGACATTCCATGTTTTACGCAGGAAGCTCCTTGTGGTCCTGTACGTGCTGAAATTAGACCAGACGTTCCATGTTTTACGCAGGAAGTTCCTCGTGGTCCTGTATGTGCTGAAATTAGACCAGGAAACAGAGAGTTTAACAGGGTACCTTCATCTAGGGAAAATCCCATGTTTGTCCAGATTCAGAATGATTCTGTTGTGCCTGATATTTCAGTAAATCATCCAACAGTCTTATCAAATATCAAAACAACACCAACATCAACTTCAGAGTCTTCTTGCACCACTGAGGGTGACAAAGTGGAGGAGACGCAGAACAGAGAACCTAAAGAGAGAAACCGGATTAGTGAAGAGTTCCTCAAGAGGAAACCCAGCCGCCCTGTCCAGAGGAGTTCCAGACTGAGACACTCACTGATATTCAGTTCAAATTTGGAGTTGAATACGGCAGGAGATATGAAAGATACTGCAGGAGAAAAAGAAGAGGATGAAGCTTCAAAACCTTTAGCTCGTGTCTCACATATCTTGGATAAAAAGAGGACTAGTTCTTCATTTCAACCATTTCAGTGGAGCAATTTTGTAAAGTCAGCCACATTTGATAACTCCACCATAGAGTCTGCACAACCTGAGGATGAACTGAACAAAATGGGTGAAAATTCTGATTTAGATAAAGTTGAAAACTCCCAAAAACTTAAAACAAAGGGTCCTCTGCAAGAAAAAGACCAACCTCAAACAGCAGTTCCTGAAAGAAAAAGCCAGAGGGATGAATGTCCCTCTAATCTATTGCAAAAGTCATCTTCTTTGATAGATATGAATGACCCTGACTGCAGACTGAGGTATTTCAAAGAGTTGGCAGCCAAACGCAAACTTGCAGCAGCAAAGGTTTCTCAGAGCAATCCGGTGAAAGCCACCCAAAAGTTTGCTCTACCAGAGAAACCTTCAACTACTGACGCAGATAAAAATGCAGGACCTGTTTTCAAGACCCCAGAAACTACACTCAAGACAAAAAATACCACTGTCCCAGCACCAGAGACCAAAGAAACCTGTAAAGACACCAAACGTGAGGAATCAAGTAAAGACATCATGCATAGAGCTACTGATGCAGAAAAAATTAGATTTAAGAAAAGACTTGCGGAAGAATCTGGCTCCACATTTTTTCAAAAAGACACTGATCCAACTCTAAAACCTGTTGAAGAGGCAAGAACAGTTTCTACAGCTAAAAATCAGACATCCCCCATTTTAAACATTTTTGCACAAAAGTCTTTCTGTGCTTTGTCTGGTGAGTCCACAGATCCTTGTGCAAGCTCATCCTCAGAACCTTGCTCAAAAAACTCCCTTTCTACAGCCAATGCTACATTGGTGGCTCAAGCAGAGTCTGTTGCATTCAATACTCCCTCAACAGAATCCGGCCTCATCCAATTTCACAGTACAAAAGAAACAGACCACTCCCATGGTGTTTTGACAGGGAGTTGTCCGCCAGTAAAGTTACCACAGACAAAGTGTATGTCACCACTTAGCGCCACTCAAAGTGAGGGCTGTCTATTTGCAAATGACTCCCAAACTCTTGCACAGAGCTCACCCAATATTTCTAGCACATGCTCTGATACTGTATCTCTGGATTCTAATTCAAAACCAAGCCTTGCAAATGTAGATACATCTGTACCCTCAAAACCTGACCACATAAATAATGTTCCCTCAGCATTTTCTACAGCTGGAATTAGTTCCTCTCAACACCCCACTGCAACAAAGGCAGACTCATTTCAGCACCTCACTGAAACTGTGGAAGATTTTTCCAGACACTCCACCACAGTAGGGTCTGAACCATCTGCAGCAGAAAGTGCATGTTCACAACACCCCTCTGCAGCAGAGATGGACTCTTCTCAGCAGCCCGCTGCATCAGTGGTAGACTCTTCCCAACATCACACTGCAAAAGAAAGTGAACTTTACCCAAAACCCACTGCAACCGGTACAGAACCTTTCAAACAGACTACTCCATCAGTCACAGACTCTTCACAGCAGCCCACTGGAACAGTCACAGACTCTTCTCAACCACCTACTGTAATAGAGACAGATTCTTCTCAAAAGCCCATTGCAATGGAGACAAACATTTCTCAGCAGTCCACAGCATCAGTGGTAGACGGCATTCAACAGACAACTGCATCAGGGGTAGTCGCTCCCCAAAAGCACACTGCAATAGAATGTGAACTTTCCACAGAACCTTTCAGGCAACCACATGCATTGGGAGCAGACTCTTCTCATCAGCCTACTGCAACAGTCACACACTCTGCTCAACCACCCACTGCAATAGTGACTGATTCTTCTCAAAAACCTGTTGCAATGGAGACAGACACTTCACAGCAGTCCACAGCATCAGTGGTAGATGCCATCCAACCGCCAACTGTCCCAGACTCTTCCCAGCAGCTCACTGCAAAAGTCACAAACTCTTCCCTGCAGCCCACTGCAACAGTCACAGACTCTTCCCAGCAGCCCACTGCAACAATCACAGACTCTTCCCAGCAATCCACTGCAAGAGTCCGAGACCCTACCCAGAAGCCCACTGCAACAATCACAGACTCTTCTCAACAGCCCACTGCAACAGAGACAGACTCTTCCCAACAGCCCACTGCAACAGTCACAGACTCTTCCCAGCAGCCCACTGCAACAGAGACAGACTCTTCCCAGCAGCCCACTGCAACAATCACAGTTTCTCCCCAGCAGCCCACTGCAATAGTCACAGACTCTTCCCAGCAGCCCACTGCAACAATCACAGTTTCTCCCCAGCAGCCCACTGCAATAGTCACAGACTCTTCCCAGCAGCCCACTGCAACAATCACAGTTTCTCCCCAGCAGCCCACTGCAATAGTCACAGACTCTTCCCAGCAGCCCACTGCAACAATCACAGTTTCTCCCCAGCAGCCCACTGCAATAGTCACAGACTCTTCCCAGCAGCCCACTGCAACAATCACAGTTTCTCCCCAGCAGCCCACTGCAATAGTCACAGACTCTTCCCAGCAGCCCACTGCAACAATCACAGTTTCTCCCCAGCAGCCCACTGCAATAGTCACAGACTCTTCCCAGCAGCCCACTGCAACAATCACAGTTTCTCCCCAGCAGCCCACTGCAATAGTCACAGACTCTTCCCAGCAGCCCACTGCAACAGAGACTGCGTCTTCCCAGCAGCGAACTGCAACAAACGCAGACTTTTCCCAGCAGCCCACTGCAACAGAGACATATTCTTCCCAGCAGCCCACTACGACAGAGACAGATTCTTCCCAGCAGCCCACTACAACCGAAATAGACTTTTCCCATCAGCCCACTACAACAGAAACAGACTCTTCCCAGCAGCCCACTATAACAGAGACAGACTCTTCCAAGCAGCCCAATACAACAAAGACAGATTCTTCCCAGCAGCCCACTAAAACAGAAATAGACTCTCCCCATCAGCCCTTTACAACAGAAACAGACACTTCCCAACAGTCCACTACAACAGAAACAGACTCTTCCCAGCAACCCACTGCATCAGAGACAGATTCTTCCCTGAAGCCCACTACAACAGTCACAGACTCTTCCCAGCAGCCTGCTGCACCAGAGACAGATTCTTCCCAGAAGAACACCACAACAGTCTCAGACTCTTTGCATCAGCCCATTGCAAAAGACACTGATTTGTCCCAGCAGCTCACTGTAACAGAAAGTGAATCTGTAACAGAAAGTGAATCATCCCAAAACTCTACTAAAATGATGGCAGACCCTTCCAAACATCCGATTGAAACAGTAAATGAATCCCTTCAACACATCAATGCAACAGAGTCTGACTGCATGAATGAGAAAAAGAAAAAAGATGATAACTTATCCGAACCCTTCAGCAAACCCGTTTCAGATGCTAACATTACACAAGCAGACAATAGTGTATCTCAAATTACAGTCATTACAGACTTAAGTTCCACAGCTAAGCATTCCCAATCTGATACTGTTCCACCTTGTGATAGCCAAGTGGAACTAAACCAAACACAAGCAGGGACCAAACCATGTATAACTCCAATGGAAAAAGACACTGACAATGATGATTTAACTAGTCTCAATTCAGTTGAGGTGAGCTCAACTCAGCCTCAAGGTTCACCACAGATTTGCCTGTCCTCAAATGAGATTAACTCAACTCAGGAAATCACACAATTACAATCTTGCCTATCATCAAACCCTATGGAATCTAGTTGTATAAATGACCCAAAACCTGAGAAAACAGATGAGTGCCAGAAGAATGAGACCATTACAGAGCAATCTCAGAGGCATGAATCTTCAGATATAGCTGAAGGGCCTGAGATAACTCAGACAGAGGTTTCTACAGCCTCAGACCCTAAACAAACAACACCAGAGGTGGAAAACTCTGTGTCTAACTTTGCAGAGGGTTCAGATATGACTATACACAGTAATTCAGAAAATTCAGTAACTCAGTCATCTGTTGCAAAGAATCCAAAATCAATCATGTCCACCCATCAGTCCTCTACTGCAAATGTTATCTCGTGTAGCAACCTTAGAGATGACACTAAAGTTCTTTTAGAGCAAATTTCAGCAAAAAACCAAAGCAGATCATCCCAGTCCAAGGAGACTCTTGCTGCACCCAATGAAGCAAAAGAGGGTGAGGTTAGCTCTGCAGATAAACTGTTCTCAAATTATTCAGGAAGGCCCTGGTCCTCCAAGGCTACACCAGAAGAACGGGATATGTTACTACAGAAGATGGAGAAAATGCGGAAAGAGAAAAAGGTCTACAGCCGTTTTGAGGAGAGTGGCTCCAGTAAAGGAACAATACGAGGGAAACAATTTGGTTCTTTCCTCCAGTCTTACCTCATAACTGTGAACTTGTGTCTCAAAACGTCTGATAATACCAAGGATTGCTGCCTATTTTGAGAGAATGGAAATCCCTGCAAGACTTAACAGATGAACTGCATGACAAAAAACAGGAACACAACCCTTACCAGCTGGAATAAGCTTTCAATAGGGCAGGTATTTCCTATTGTGTGTGTATATATAGCTGTGAAACAAATATCTGAATCTTTTGTAATTATCAGGATTTCTGAATCCAGAAATTCTGATCTAAAAAAAGTTGTTTACCAAACAAAAAGCGGTCATTACAAAGTGAACTGCCAAAGACAGAGCATGTGAGCGATGTGGACTGGGGGACTGGGGGAGGAGTTGTGTGATATTGCCAGGAGCAAGGGGCAGGTTTTTTGAAAGTCTCCAAGATCGTTCCGATACTGCTCCAACATGTTAACAGACTAGTGTTCTTGTTTCAATACAGCATGAAACTTTTCTCCAAGTATTGTTTATTTTTTCATTTAATATAATTATCTTGTGCCAAGATGTTTGTGATATTAAAAACAAACATTGAAAGAACTTTATAGTGGATCAGTAACTGGGCACACATTTTTCTATGTGGTTTACATGAAGCAGTGAGTGAGCAGCAGGAAACAGAAAACATGGAACAAAGTTGAGCTAGAGTGGAATGATCACAGGATGCTTTGGAAAGGGGAAATTGTTCAGGATGTTCCACTGGATGCTTAAGTGTTTACTAATCCATTTTTTAAAGACATGCCACTGTAAAATACATTCTGTTGGTTTATGTTGATACACGACGGAAACTCCTAAAGCACATGTTTGTGAGTCAAGGTAACATATTGTTAAGAGCGTGTGCAAGAACTTCTTTTAGCAAAATCACTAAAGTACACAATAAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01180000_07634809_07642632.mRNA True 7841 mRNA 0.44 5 7633985 7643019

Neighbor

gene id symbol gene type direction distance location
CI01180000_07631328_07632833 NA coding downstream 1152 7631155 ~ 7632833 (-)
CI01180000_07598849_07621310 BTAF1 coding downstream 12675 7598233 ~ 7621310 (-)
CI01180000_07536722_07547119 MARCH5 coding downstream 86866 7536472 ~ 7547119 (-)
CI01180000_07491283_07505536 KMO coding downstream 128449 7491283 ~ 7505536 (-)
CI01180000_07417697_07426881 ATL2 coding downstream 207104 7417524 ~ 7426881 (-)
CI01180000_07664300_07675535 LRRFIP2 coding upstream 20835 7663854 ~ 7675535 (-)
CI01180000_07691853_07694359 NA coding upstream 48737 7691756 ~ 7694365 (-)
CI01180000_07696310_07709917 CAPN1A, CAPN11 coding upstream 53291 7696310 ~ 7709917 (-)
CI01180000_07713320_07727939 CAPN2, CAPN2A coding upstream 69355 7712374 ~ 7728200 (-)
CI01180000_07935855_07937319 NA coding upstream 292694 7935713 ~ 7937577 (-)
G684128 NA non-coding downstream 5884 7627876 ~ 7628101 (-)
G684079 NA non-coding downstream 101458 7531489 ~ 7532527 (-)
G684054 NA non-coding downstream 248521 7380701 ~ 7385464 (-)
G684049 NA non-coding downstream 284745 7348959 ~ 7349240 (-)
G684020 NA non-coding downstream 300836 7328754 ~ 7333149 (-)
G684134 NA non-coding upstream 88930 7731949 ~ 7802982 (-)
G684147 NA non-coding upstream 159981 7803000 ~ 7833188 (-)
G684150 NA non-coding upstream 191354 7834373 ~ 7834663 (-)
G684152 NA non-coding upstream 196589 7839608 ~ 7839813 (-)
G684158 NA non-coding upstream 226372 7869391 ~ 7870302 (-)
G684080 NA other downstream 51182 7579404 ~ 7582803 (-)
G684071 NA other downstream 108331 7506890 ~ 7525654 (-)
G684018 NA other downstream 220853 7403147 ~ 7413132 (-)
G683673 NA other downstream 871141 6762075 ~ 6762844 (-)
G683294 NA other downstream 1878459 5751044 ~ 5755526 (-)
G684182 NA other upstream 267742 7910761 ~ 7911208 (-)
G684493 NA other upstream 1079674 8722693 ~ 8723867 (-)
G684929 NA other upstream 2255405 9895316 ~ 9901388 (-)
G686052 NA other upstream 3698597 11341616 ~ 11343496 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_006882 fam83ha coding NC_007124.7 CM002897.2 42564666 ~ 42579437 (-)