Gene
RNA
| Item | Value |
|---|---|
| gene id | G679533 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01180000 |
| NCBI id | null |
| chromosome length | 11503085 |
| location | 349078 ~ 350972 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU800276 | False | 212 | lncRNA | 0.30 | 2 | 349078 | 350972 |
| TU800275 | True | 209 | lncRNA | 0.30 | 2 | 350724 | 350972 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01180000_00196890_00235102 | ACOXL | coding | downstream | 113806 | 196856 ~ 235272 (-) |
| CI01180000_00174532_00175668 | NA | coding | downstream | 172316 | 172507 ~ 176762 (-) |
| CI01180000_00165666_00171227 | NA | coding | downstream | 177851 | 165423 ~ 171227 (-) |
| CI01180000_00087832_00089100 | NA | coding | downstream | 259958 | 87774 ~ 89120 (-) |
| CI01180000_00356767_00357401 | NA | coding | upstream | 5765 | 356737 ~ 357401 (-) |
| CI01180000_00365377_00365888 | NA | coding | upstream | 14203 | 365175 ~ 365888 (-) |
| CI01180000_00377933_00385445 | NA | coding | upstream | 26945 | 377917 ~ 385445 (-) |
| CI01180000_00390297_00422803 | ITGA9 | coding | upstream | 39293 | 390265 ~ 422837 (-) |
| CI01180000_00455918_00461072 | NA | coding | upstream | 104916 | 455888 ~ 461072 (-) |
| G679376 | NA | non-coding | downstream | 47751 | 299168 ~ 301327 (-) |
| G679517 | NA | non-coding | downstream | 54498 | 292972 ~ 294580 (-) |
| G679499 | NA | non-coding | downstream | 91709 | 257007 ~ 257369 (-) |
| G679491 | NA | non-coding | downstream | 98412 | 250306 ~ 250666 (-) |
| G679391 | NA | non-coding | downstream | 156493 | 188939 ~ 192585 (-) |
| G679556 | NA | non-coding | upstream | 204718 | 555690 ~ 556058 (-) |
| G679564 | NA | non-coding | upstream | 217402 | 568374 ~ 568575 (-) |
| G679569 | NA | non-coding | upstream | 222230 | 573202 ~ 573824 (-) |
| G679587 | NA | non-coding | upstream | 289706 | 640678 ~ 641448 (-) |
| G679801 | NA | other | upstream | 818887 | 1169859 ~ 1170528 (-) |
| CI01180000_01776944_01781186 | NA | other | upstream | 1427620 | 1776872 ~ 1781339 (-) |
| G680525 | NA | other | upstream | 2265382 | 2616354 ~ 2616756 (-) |
| G680506 | NA | other | upstream | 2420075 | 2771047 ~ 2851916 (-) |
| CI01180000_02988807_02995955 | NA | other | upstream | 2636109 | 2987081 ~ 2997401 (-) |
