Gene
RNA
| Item | Value |
|---|---|
| gene id | G681405 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01180000 |
| NCBI id | null |
| chromosome length | 11503085 |
| location | 5520237 ~ 5521359 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU802346 | True | 797 | lncRNA | 0.33 | 2 | 5520237 | 5521359 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01180000_05460865_05464029 | NA | coding | upstream | 55704 | 5460865 ~ 5464533 (+) |
| CI01180000_05361478_05362402 | NA | coding | upstream | 157731 | 5361299 ~ 5362506 (+) |
| CI01180000_05307085_05313251 | MAT1A | coding | upstream | 206848 | 5306869 ~ 5313389 (+) |
| CI01180000_05276728_05284341 | SFXN3 | coding | upstream | 235670 | 5276418 ~ 5284567 (+) |
| CI01180000_05236666_05242597 | LZTS2A, LZTS2 | coding | upstream | 277489 | 5235723 ~ 5242748 (+) |
| CI01180000_05552106_05558265 | SLC25A16 | coding | downstream | 30516 | 5551875 ~ 5559075 (+) |
| CI01180000_05566677_05569815 | ALOX5, ALOX5A | coding | downstream | 45318 | 5566677 ~ 5569854 (+) |
| CI01180000_05587131_05604001 | FAM21C | coding | downstream | 65688 | 5587047 ~ 5605024 (+) |
| CI01180000_05605783_05625064 | ZFAND4 | coding | downstream | 84424 | 5605783 ~ 5626277 (+) |
| CI01180000_05721160_05745421 | MARCH8 | coding | downstream | 199741 | 5721100 ~ 5745673 (+) |
| G681227 | NA | non-coding | upstream | 18107 | 5499664 ~ 5502130 (+) |
| G681400 | NA | non-coding | upstream | 20820 | 5499213 ~ 5499417 (+) |
| G681222 | NA | non-coding | upstream | 80922 | 5433842 ~ 5439315 (+) |
| G681379 | NA | non-coding | upstream | 137586 | 5374429 ~ 5382651 (+) |
| G681373 | NA | non-coding | upstream | 160291 | 5359139 ~ 5359946 (+) |
| G681269 | NA | non-coding | downstream | 5598 | 5526957 ~ 5532092 (+) |
| G681425 | NA | non-coding | downstream | 61741 | 5583100 ~ 5583367 (+) |
| G681426 | NA | non-coding | downstream | 62158 | 5583517 ~ 5583720 (+) |
| G681249 | NA | non-coding | downstream | 109740 | 5631099 ~ 5639384 (+) |
| G681268 | NA | other | upstream | 146475 | 5370410 ~ 5373762 (+) |
| G681137 | NA | other | upstream | 734606 | 4783305 ~ 4785631 (+) |
| G680736 | NA | other | upstream | 1735796 | 3765691 ~ 3784441 (+) |
| CI01180000_03571292_03571611 | GNG2.L, GBG2, GNG2 | other | upstream | 1947840 | 3569165 ~ 3573135 (+) |
| CI01180000_02690045_02691641 | NKX6-2, NKX6-2.L, NKX6.2 | other | upstream | 2824801 | 2689271 ~ 2693221 (+) |
| G681592 | NA | other | downstream | 951676 | 6471995 ~ 6478999 (+) |
| G681686 | NA | other | downstream | 1111549 | 6632908 ~ 6634989 (+) |
| G681667 | NA | other | downstream | 1134487 | 6655846 ~ 6659546 (+) |
| CI01180000_07403482_07412752 | HELLS | other | downstream | 1881788 | 7403482 ~ 7413190 (+) |
| CI01180000_07694615_07695428 | MRPL14 | other | downstream | 2142064 | 7694529 ~ 7695667 (+) |
