XLOC_015224 (dipk2aa)


Basic Information

Item Value
gene id XLOC_015224
gene name dipk2aa
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 8261109 ~ 8312199 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030546
TAAATACGAAACCCGATCCGCGAAGTCGGGTCTTTTGTGCAGCTGTTTCAAGGCTCGCAGACTGAACTTGTCTCGAAATTGAGAAGAAAACACTTGCGAATTTTAAAGGAATTAAGAAACGGGAATAGGAGTGTGCACGGACAACGCGAGAGGAAGCACCGACGCGCGCGGCTCGTAATAAAAGACAGGAGTTCATAAATAGACAACCAAAGCTTCATCGAACGAGCGGAATAACCCACTTGGTTCActcgttttttttatttgGTAACTTGAATCAGGATGTGGCACTCTAATGCTTGAACGTAACTTAACCTCCTTTTAAACATGGTGAGAGAGGCTCCTGAAACCAACAGTCTAAACGGGCAACACTGCTGCCAGCATGGACAACTCTTAACTTGAGCGTGATGGGGATGATAATGATAGTATACATCGCAATGATGGAAGAGCTGCATTGACAGAGATTAACCGCACTCACTCTAAGTGCACCGCTGCCAATCAGCATGCTGCGGATATTGTCGCTTAAATTTGGCCGCGTCTACCGATGCGGCAAGTTCCTCTTCATTGTAGCACTTTTTGTCATCCTGCTGATGAACACCCACAACCTGTTTGCCTCATTTCAGAGGAACGAGCTCACAGACCGTCGATTTATAGGCCTCAATAAATGTCCGGCCTGCTTTGGGACTAGCTGGTGCCGCAAGTTCATGAACGGGCAGGTGACCTTCGAGATGTGGGGTCGCCTGCGCTTTCTAGACTTCTTCAACGTAAAGAATGTTTTTTTCGCTCAATACGGAGAACCCAGGGAAGGAACGCGCAGGGTCGTGCTCAAACGCTTGGGTTCCAACCAAGAGCTGGCAGAGATCGATCAGAAGATCTGCAAACGGGCCACTGGAAGGCCTCGCTGTGATCTCATACAGAGTATGTACAAGACTGAGTTTGCCAGACTTAACGGGGATGTAAGACTTCTGACCCCGGAGGTGGTGGAAGGCTGGTCGGATCTAGTGCACTGCCCTTCTCAGAGGCTTCTAGACCGGGTGGTCAGGAGGTACGCCGAAACTAAGGATTCTGGAAGCTTCCTGCTGAAGAACCTAAAGGACACGGAGCGAATGCAGCTGCTGATGACGCTAGCGTTCAACCCCGAGCCGCTGGTGCTGCAGAGTTTTCCCTCAGATGAGGGCTGGCCGTTCGCCAAATACCTGGGGGCCTGCGGCCGGATGGTGGCGGTGAATTACGTGGGCGAGGAGCTCTGGAGCTTCTACAATGCGCCCTGGGAGAAAAGAGTAGATCTTGCCAAGCAGCTGATGGACATCGCCGAGCAGCTGACCAACAATGACTTTGACTTCGCCCTTTACCTCCTGGACGTCAGCTTCGACAATTTCGCAGTCGGGCCCCGTGATGGAAAAGTCATCGTCATCGATGCTGAAAACGTGATCGTGGTGGACAAAAGATTGGTGAAGCAGAATAAACCCGAGAGCTACGATGTGTGGTATGAGAGCCGCTATGAGGAATGCGATAAAGAGGCCTGTCTCTCCTTCTCCAAGGACATTCTCTGCTCGCGGGTCACCGTGGACCACAACTATTACGCCGTGTGTCAGAACCTGCTCTCCAGATTCTCCAGCTGGCGGGGCAGCACTGGTGGTCTTCTCCACGACCCCCCTCCGGACGTGGTGAAAGACGGCCGCCTCATAGCACTGCTGGACGAGTGCACCAGGCCGCAGAAACGCTACGGCCGCTTCCAGGCGGCTAAAGAACTGCGCGAGTTCCTGACACAACTCACTCAGACGAGCAATGCTGACAGGTAGTGTTGAGAACGGAGGGGGGGGACACTGAACTTTTGCAGCACACCCCTCCCCCTCCAATAAACGAAAAAGACTATCATATTCTGGAACTCATTTGTACACCCTTAAGGGAGTCGCTGTTTTGTTGCCGCTATCAATCATGCCATTGTTGGCTCTGGTCCTGTTTGGGCTTAATAAAGAAGTTTGCACATCTA

Function

symbol description
dipk2aa Predicted to be located in extracellular region. Is expressed in diencephalon; epiphysis; floor plate; optic tectum; and retinal photoreceptor layer. Orthologous to human DIPK2A (divergent protein kinase domain 2A).

GO:

id name namespace
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041114-148 Predicted to be located in extracellular region. Is expressed in diencephalon; epiphysis; floor plate; optic tectum; and retinal photoreceptor layer. Orthologous to human DIPK2A (divergent protein kinase domain 2A).

Ensembl:

ensembl_id ENSDARG00000012816

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030546 True 1990 mRNA 0.52 4 8261109 8312199

Neighbor

gene id symbol gene type direction distance location
XLOC_015223 BX248229.1 coding upstream 71709 8189285 ~ 8189400 (+)
XLOC_015222 chst2a coding upstream 146501 8112449 ~ 8114608 (+)
XLOC_015221 pcolce2a coding upstream 210611 8031234 ~ 8050498 (+)
XLOC_015220 si:ch211-38m6.6 coding upstream 386725 7847480 ~ 7874384 (+)
XLOC_015219 kcnmb2 coding upstream 431709 7818368 ~ 7829400 (+)
XLOC_015225 NA coding downstream 172195 8484394 ~ 8488138 (+)
XLOC_015226 fubp1 coding downstream 337094 8649293 ~ 8663104 (+)
XLOC_015227 NA coding downstream 378459 8690658 ~ 8691029 (+)
XLOC_015228 usp33 coding downstream 404956 8717155 ~ 8777496 (+)
XLOC_015229 zzz3 coding downstream 466291 8778490 ~ 8842472 (+)
XLOC_015218 NA non-coding upstream 492836 7763907 ~ 7768273 (+)
XLOC_015217 CT027646.1 non-coding upstream 537168 7723870 ~ 7723941 (+)
XLOC_015216 CT027646.4 non-coding upstream 537526 7723394 ~ 7723583 (+)
XLOC_015215 SNORA81 non-coding upstream 539719 7721212 ~ 7721390 (+)
XLOC_015231 NA non-coding downstream 820386 9132585 ~ 9330209 (+)
XLOC_015232 NA non-coding downstream 1004120 9316319 ~ 9318279 (+)
XLOC_015236 NA non-coding downstream 1339517 9651716 ~ 9657047 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000004_00004575_00026821 C3ORF58, CLG20H3ORF58, C20H3ORF58, 1190002N15RIK, C17H3ORF58, CSGR08H3ORF58, C3ORF58.L, C1H3ORF58, DIA1A, DIA1B, C10H3ORF58, CUNH3ORF58, C3H3ORF58, C14H3ORF58, CLG14H3ORF58, C7H3ORF58, CLG9H3ORF58 coding CI01000004 null 4255 ~ 28015 (-)