XLOC_015451 (mpv17l2)


Basic Information

Item Value
gene id XLOC_015451
gene name mpv17l2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 24770435 ~ 24778912 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030904
ACCTTGATGCTCGTGAGCGCAACGCCATTACGCATGGTCTCGTCGCCGACTCATGTTGGCTGCTCCGTCTTTCGGTTACATGAATGAAATCTCAGTTAAACATGTAAAATCTCTTGGACAATCTAAACTACCCGCTGCGGAAGAAACTACGATAAGAAGCCATTCTCGCATATCGAAACGACACCGGTTTAACGCATCTATCTGAAGTATTACGGATGCATTGGTTAAGTTACATCACTTGTCAGTATTTAGACATTTTATTAGCATATGTTATGAGATTTACTCCGGAGTAAAGGCACAGAAGTGGCGAATGAGGAGCAGAGGCGCTGCTCGAGCAAACAGCTGAGAGGATTTTGAGTGAAATCGTCGTCAACATGATATCTCGTCAGGGTAAGGAGTTTCTGGTCAGGATCGCCGGTTACTGGAAGCCGCTTTTCAGAGGCAGATTTCTGATCGTCACCAATACGGTAAGCTGCGGGGGAATGCTGGCGGCAGGAGACCTCATCCAGCAGACCCGAGAGATCCGGAGGACACCCGGCCGAACACGTGACTGGTCGCGGACAGGTTGTATGTTTGCTGTGGGATGCTCTATGGGCCCCTTCATGCACTATTGGTACCAGTGGCTCGACAAATACTTCATTGGCAATGGCATAAATAATGTCTGCAAGAAAGTGCTCGTTGATCAGCTGGTTGCGTCGCCAACGTTGGGGGCCTGGTACTTTTTGGgtaTGGGAATGATGGAGGGTCACACTTTCATTGAGGCGCAACAGGAATTTAGAGACAAATTTTGGGAGTTTTACAAGGCCGATTGGTGTGTTTGGCCAGCAGCTCAGATGATAAATTTCTACTTCCTGCCACCCAAGTTTCGTGTCCTTTATGTGAATATAGTTACTCTGGGATGGGACACTTACCTCTCCTACCTCAAACACAGAGACACAGTAGAGGTCACAAAAGAAGCTGACGGAACCGCCTGAAGATGTCTGACCAgcattaaacacacacatttaaataaatgttattctgGAGACTGTTAATCGACAGCTTACTGTCTGTAAATTTCTTATAACAGattaaatcctgtaaatattGGTAGATTGCACATTTtgctttatatttgtttttaaattatacagtgtattgaaacattttaaaacaaatgtaattgtCCAAAATCTGTGTATTTGTGACATACGCTgggcaattttaaaaaaaataaatcattctgTTTACTTTATATACACATGATTTTATAGTAGAACGTTTTTTAGTTCTTTTACTATAAATACTGATGTTTTCAGTTTGGTCAAGCATGTTTATAATCAAAATAATGCCAAAATTATTTTCCTATATATATTTGAGAAATGCTTTATGTAACATAAATGACATAGACAGTAATCTTACTGTTGATTGTTGCTATTATGATGTTCAAGAATTGCCTTTACATGCAAATTTTTTCCTAGTAATATAATTTTTTGATGATTAATGTATCTAGTGCTTTTGATTTTTGACtacttggatttgtttatttaatggaaggaaataaacattttttcGTGCGTGTGA

Function

symbol description
mpv17l2 Predicted to be involved in mitochondrial ribosome assembly. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Predicted to be active in mitochondrion. Is expressed in liver. Orthologous to human MPV17L2 (MPV17 mitochondrial inner membrane protein like 2).

GO:

id name namespace
GO:0061668 mitochondrial ribosome assembly biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005739 mitochondrion cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-040718-306 Predicted to be involved in mitochondrial ribosome assembly. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Predicted to be active in mitochondrion. Is expressed in liver. Orthologous to human MPV17L2 (MPV17 mitochondrial inner membrane protein like 2).

Ensembl:

ensembl_id ENSDARG00000056367

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030904 True 1563 mRNA 0.40 5 24770435 24778912

Neighbor

gene id symbol gene type direction distance location
XLOC_015450 ifi30 coding upstream 2965 24762567 ~ 24767470 (+)
XLOC_015448 pik3r2 coding upstream 15088 24700922 ~ 24755347 (+)
XLOC_015449 NA coding upstream 49648 24716314 ~ 24720787 (+)
XLOC_015447 mast3a coding upstream 87070 24638367 ~ 24683365 (+)
XLOC_015446 NA coding upstream 158367 24603292 ~ 24612068 (+)
XLOC_015452 pde4ca coding downstream 2114 24781026 ~ 24866649 (+)
XLOC_015453 rab3aa coding downstream 88622 24867534 ~ 24878813 (+)
XLOC_015454 si:dkey-149i17.7 coding downstream 107075 24885987 ~ 24886752 (+)
XLOC_015455 NA coding downstream 124754 24903666 ~ 24906615 (+)
XLOC_015456 NA coding downstream 133381 24912293 ~ 24927754 (+)
XLOC_015443 NA non-coding upstream 272594 24484273 ~ 24497841 (+)
XLOC_015440 CR384062.1 non-coding upstream 419395 24348589 ~ 24351040 (+)
XLOC_015437 BX000358.1 non-coding upstream 509139 24261217 ~ 24261296 (+)
XLOC_015461 NA non-coding downstream 351611 25130523 ~ 25137789 (+)
XLOC_015468 CR392012.1 non-coding downstream 1255263 26034175 ~ 26039606 (+)
XLOC_015470 NA non-coding downstream 1387666 26166578 ~ 26167419 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000004_07907663_07910335 MPV17L2 coding CI01000004 null 7907663 ~ 7910478 (+)
bowfin (Amia calva) AMCG00006075 NA coding CM030142.1 CM030142.1 15773678 ~ 15776508 (-)