XLOC_015568


Basic Information

Item Value
gene id XLOC_015568
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 32149121 ~ 32188991 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033583
TTCTGTTCTTACTCCTGAATGGGGCAGCGAGTAACACCTAGCGACTGGCAGCGGTCCCGAAGATTCCTCATGGGGGTTATAAGGGACACCGAGTGTCCCATTATAGGACAGAGGAGGAATAATATGCCAACACCTCAAGCACATCAATACATCAATGAGCTCACAACAGCAACATCTCTTTGTTTCACAGTTGCTCTCAATAATTCACATCTGCACATTTGCCAAGATGTGATATCAGTTCTGCCATCCAGATGGACCCAGACGCTCCATGTTGTTGGAAGAGCTGGGTTTCTTTTTCCAGCTGTTATCAGCGCTCATGGACATCTGAAGTGGAGCTGAGAGGGTAAAGTCATACTGAAAGTGAGCAGAAAGCTGAAACTGGGTCAGGCAGTTTTGCCAAGCAGCTGGAACACACACGGATAGGCACACACTCTtgcaaataaagcttctttattggCACCGGTGGTTCCATGAAGAACATTTACATTCCACCAAAGGTTTGGTGCGATGGAAAAAAGGTTCATTAGAGAATTAAAAGGTTTTTCGCATGATGACTGCATCTGAAAGTTTAGACTGCAGACGTGTTGCCTCGCTGCCCAATCAGGCAGTGATTATAGAAGCAGATTGTGTGCATGAAAACATCTCGTAAAACTGAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033583 True 656 lncRNA 0.45 2 32149121 32188991

Neighbor

gene id symbol gene type direction distance location
XLOC_015567 NA coding upstream 21191 32019642 ~ 32127930 (+)
XLOC_015566 mycb coding upstream 130750 32016256 ~ 32018371 (+)
XLOC_015565 otulinb coding upstream 139405 31942390 ~ 32009716 (+)
XLOC_015564 NA coding upstream 280366 31866499 ~ 31868755 (+)
XLOC_015563 stard3nl coding upstream 295776 31838442 ~ 31853345 (+)
XLOC_015569 NA coding downstream 75364 32264355 ~ 32266672 (+)
XLOC_015570 NA coding downstream 196697 32385688 ~ 32390974 (+)
XLOC_015571 BX323559.6 coding downstream 415856 32604847 ~ 32608027 (+)
XLOC_015572 NA coding downstream 448089 32637080 ~ 32637505 (+)
XLOC_015573 NA coding downstream 455934 32644925 ~ 32647404 (+)
XLOC_015559 NA non-coding upstream 362839 31784012 ~ 31786282 (+)
XLOC_015554 NA non-coding upstream 608531 31537338 ~ 31540590 (+)
XLOC_015549 NA non-coding upstream 856518 31291646 ~ 31292603 (+)

Expression


Co-expression Network