XLOC_016042


Basic Information

Item Value
gene id XLOC_016042
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 260035 ~ 261166 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033339
taagctaaaaagaaaatgaatgaatgaatgaatgaatgaagactttACAGTGTTATTTGACTTTTTCTTAGTCAGTCCCTGAAGACTGTTTGACTCTCCTGATGCCATAAAGCTCGTTTATTTCACTGTGTTGTGCTTTGCTCTGTTGTAATTCTGCCTGCtgtaatttagttatttatttatttattttattattatttttttaaagatttatttttggccttttttgcctttattagacaggacagtatttagacaggaagcgaagttgtagagagagagagaggggttagGGTAGGTAAATGTCCTCGAGCTGGGATTCGATCTCGGGACGCCTTGACACGCTCCTGCATCATATGTCgacacgctaaccactaggctattgcgtcgacttagttttcatttttatgcatGATTTACACCCTTACAAAATCCCCACAATCAATCCAAATTCAAGACTTTTCCCCCAAATAGAGCTCTTCAGGCCATGTGGTGAACtgggcatgggatgataaccgggtATACTGCGGttaggaaaagtcaaggttttaaaagcaTCAACATTTTCTGCGATACCGTTCATAATGTATGTGTAGAATTTCTTATTTATGTTTTTAGGACAGCAGAAAACACattcaaagatgccattttacATAAAGAAATCAGAGTTTTAGatttaatgaagacagcagaggtcaatcattcatttgagttatttagcctgacgtgttcactgctccaaaatattagaaatgtttctcaaaataaaatatgctgtGTTCAGAAGAGTAAAAAGTTTGTGTTTTTATGCAGAcacttaaaaagaaaatatctgtACAGCGAAACCACGATAATTTTATCCTGGGTCATCAAACCGTCAGAATCTAACACCAGCCCATGCCAAGGTGAAACTGGAATATAcatcactgaaaaacaaaatattgcaatgccatGTCATGCAGCCCGGTCCAACccagCACCGCATCAGTGTGATCAGGTGTGTGATGGACCCTTTCCACATCAGTGTTCTGACACGTTCAACACTCATCAGCATCTTCAACTCTTGAAAGTGTTAGatattcagatttttaaataa

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033339 True 1096 lncRNA 0.37 2 260035 261166

Neighbor

gene id symbol gene type direction distance location
XLOC_016041 NA coding downstream 8105 250492 ~ 251930 (-)
XLOC_016040 CABZ01064859.2 coding downstream 53879 198565 ~ 206156 (-)
XLOC_016039 CABZ01064859.1 coding downstream 62370 194742 ~ 197665 (-)
XLOC_016038 znf1014 coding downstream 66328 184818 ~ 193707 (-)
XLOC_016037 zgc:113518 coding downstream 75984 176711 ~ 184051 (-)
XLOC_016043 NA coding upstream 19867 281033 ~ 281430 (-)
XLOC_016044 MEP1B coding upstream 22598 283764 ~ 293793 (-)
XLOC_016045 NA coding upstream 74686 335852 ~ 344759 (-)
XLOC_016046 CU693494.1 coding upstream 90931 352097 ~ 352779 (-)
XLOC_016047 sharpin coding upstream 93258 354424 ~ 364839 (-)
XLOC_016049 NA non-coding upstream 144164 405330 ~ 458911 (-)
XLOC_016050 NA non-coding upstream 231757 492923 ~ 532444 (-)

Expression


Co-expression Network