XLOC_017148


Basic Information

Item Value
gene id XLOC_017148
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 8998775 ~ 9007336 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036371
TGTCAGAAAGCCTGTCCTAGGAACTTAAATTAGTAATTGTTTCCCGCACGGACATTTTTACATGACGCACACCAGTACGGACTGAATGCCATTCACTGTTTATGCCGCAGGTTATGCTCTGCAAATGCGTTTATGTTATACAAACCACACATACCCACACATTCTTTACAATATCTCCAGTGCATACCTCATCTGCATATTCAGGACAGAAAATAAATGCTCATCAGAAAGAATCTCTTCTCCACTCTTGATTTTCTAACCGAAATCAGATCCATATTTGGCCGCCTCAGCCAGCTAACATCTTGAATGTAGTGGGACTTCActacaacaataaaacaataatctggacaaactaagacatttggcaaacgtttaaccatggcagaaccccaaaaattagaaaaaatgtcatacaataataatattaacaatcataataataatttaaatgatgaaaatgtataacctatcccaatcctgacatagctgcgtttaaactgcgcaaacattactccttatagttatgccatattagttcggttctgtgtgaataactgaagacgcccctttaatgcattcgcaaaattattttaaatcagacgccccatccataaccaaccttaaatcatacctgaactctgtttaacatttccaagtaaactgttttgtgacattctcataaaatctctctggtttttttaaatctttgttcgtaattgttcttagccctgtcaatgtttatctattttgtattattattataatatttcctctcctgtttctcttacgtttatattctttagctgtcaatataatactttgcgtctatggaagaaagagtcaataaagatagacaatgtgtaacatcatattcatcaaaagacggtttatgtgcaagtaaccgcaccggtccgagcaggtatcgagccagcatgggagacaagctccgataagattgcagaacaacgtctgtccctggatccgaggggtgagctttacgcgatcaccagctggcttccgttacataagggcaaatataaacGACTAaaccctcatttactcattttactcatactttttattatttataatgtccaaggcattgatattaaaactgaatgctacttttgtgcctttattagccttttttctcgcctgtttactgggttaaaaatcttacattattccatctccacctgctggtgaaagctagagcagctggcgatcttcaatcggcaatctattgcttctcctgcagttcccggatgtaatgttgaattttaacagtcgaatttgatccactgaatttatggaagcgaa

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036371 True 1320 lncRNA 0.37 3 8998775 9007336

Neighbor

gene id symbol gene type direction distance location
XLOC_017147 NA coding upstream 1312 8996867 ~ 8997463 (+)
XLOC_017146 CR853291.1 coding upstream 2794 8993860 ~ 8995981 (+)
XLOC_017145 CR388209.3 coding upstream 64252 8934408 ~ 8934523 (+)
XLOC_017144 NA coding upstream 921056 8071324 ~ 8077719 (+)
XLOC_017143 prkaa2 coding upstream 930802 8028613 ~ 8067973 (+)
XLOC_017149 si:ch211-59d15.9 coding downstream 117033 9124369 ~ 9125663 (+)
XLOC_017150 bpnt1 coding downstream 120920 9128256 ~ 9148323 (+)
XLOC_017151 fosl2l coding downstream 203901 9211237 ~ 9216772 (+)
XLOC_017152 kcnk5b coding downstream 216178 9223514 ~ 9239037 (+)
XLOC_017153 nt5c1bb coding downstream 269963 9277299 ~ 9301208 (+)
XLOC_017142 NA non-coding upstream 1096487 7901956 ~ 7902288 (+)
XLOC_017154 BX942842.1 non-coding downstream 292098 9299434 ~ 9299549 (+)
XLOC_017158 BX284679.1 non-coding downstream 712785 9720121 ~ 9722138 (+)
XLOC_017162 NA non-coding downstream 944228 9951564 ~ 9953982 (+)
XLOC_017163 NA non-coding downstream 1060599 10067935 ~ 10068758 (+)
XLOC_017165 NA non-coding downstream 1214079 10221415 ~ 10225073 (+)

Expression


Co-expression Network