XLOC_017151 (fosl2l)


Basic Information

Item Value
gene id XLOC_017151
gene name fosl2l
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 9211237 ~ 9216772 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00034196
AAAAGTGCATGGGCGGAACGGCAATTTCAACACCGAGTAATAAAGCGTAGCCATGATAAATCCCTGCAAGTAGCTTTGGCTTTTCTCTCAAAATATCCGTCAACATATGGAGGAAAATACCGTTTAACGTGGATATACATTTGGTATGGAGATTTCTGAACGAACCTGCTTCTCTGAAGGCGAAATATCCAATTCCATCAGCCAGGTCGAAATGCAGAGATCCAAAAGCCCTTTTATCGCCACGGTCAATGCAGTCGCGTCGCGGCAGGAGCTGCGGTGGATCATCGAGCCGGTGATGCAGAGTGAGAGCCTGGACCACAGCAAAGGAGATGCACAGCTCAGTCTGGATGAAGAGGAAAAGAGGAGACGGAGAAGAGAGCGAAACAAGATGGCTGCTGCCAAATGCCGCAACCGCAGAAAAGAGCTTACTGACCTTCTTCAGGAGgAAAGCGAGCGGCTGTACATGGAGCAGGTCGGGCTGCAGAAGCAGGTGAGCAGCCTGCAACAGGAGAAGGAGCAGCTAAAAATGCTGCTAGCATCGCATGCGTCCATCTGCACACTGGACAAATCTATTTCCTTAGACAACTTTCAGTCGAAAGACATCTTACCATCCAGAACTGCAGTCACAATAAAACAGGAGCCTCTGGATGGCATAA

Function

symbol description
fosl2l Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be active in nucleus.

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0005634 nucleus cellular_component
GO:0003677 DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding molecular_function
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041014-37 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be active in nucleus.

Ensembl:

ensembl_id ENSDARG00000092174

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00034196 True 656 mRNA 0.49 4 9211237 9216772

Neighbor

gene id symbol gene type direction distance location
XLOC_017150 bpnt1 coding upstream 62914 9128256 ~ 9148323 (+)
XLOC_017149 si:ch211-59d15.9 coding upstream 85574 9124369 ~ 9125663 (+)
XLOC_017148 NA coding upstream 203901 8998775 ~ 9007336 (+)
XLOC_017147 NA coding upstream 213774 8996867 ~ 8997463 (+)
XLOC_017146 CR853291.1 coding upstream 215256 8993860 ~ 8995981 (+)
XLOC_017152 kcnk5b coding downstream 6742 9223514 ~ 9239037 (+)
XLOC_017153 nt5c1bb coding downstream 60527 9277299 ~ 9301208 (+)
XLOC_017154 BX942842.1 coding downstream 82662 9299434 ~ 9299549 (+)
XLOC_017155 si:dkey-174m14.3 coding downstream 139140 9355912 ~ 9421263 (+)
XLOC_017156 rad51b coding downstream 258069 9474841 ~ 9568005 (+)
XLOC_017145 CR388209.3 non-coding upstream 276714 8934408 ~ 8934523 (+)
XLOC_017144 NA non-coding upstream 1133518 8071324 ~ 8077719 (+)
XLOC_017158 BX284679.1 non-coding downstream 503349 9720121 ~ 9722138 (+)
XLOC_017162 NA non-coding downstream 734792 9951564 ~ 9953982 (+)
XLOC_017163 NA non-coding downstream 851163 10067935 ~ 10068758 (+)
XLOC_017165 NA non-coding downstream 1004643 10221415 ~ 10225073 (+)

Expression


Co-expression Network