XLOC_017351 (BX248515.1)


Basic Information

Item Value
gene id XLOC_017351
gene name BX248515.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 26899745 ~ 26902268 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00034514
ATGGAGGGAGTGTCTCGTGCTAACAGTCTCTTCGCTCTGGATCTCTATCGGGCTCTGAGCGCCAGCAGTGCTGAGGGAAACATCTTCTTTTCTCCATTGAGCATCAGTGCAGCGCTCAGCATGGTCTACTTGGGGGCCCGAGGAGACACCGCCGCAGAAATGGAGAGGGTTTTGTCCCTCAGTTCTGTGTCTGATGTTCACTCTCATTTTGAGAGTCTCATCTCATCTATCAACAGTCCATCAGCCTCCTACATCCTCAGACTGGCCAACCGCCTCTATGGAGAGAAAACCTTCAGCTTCTTACCTGAATATTTGGACTCCACTATGAAGCTGTATCATGCTGAACTTCAGACTGTGGACTTCATTAGAGCATCAGAAGAGTCTCGACAGCTCATTAACAAATGGGTGGAAAAGCAGACAGAGAACAAAATCAGAGATCTTCTGAAGCCTGGTATGGTGACTACAATGACTCGACTCGCGTTGGTTAATGCCATCTACTTTAAAGGGAAATGGACACACACATTTCAAGCAAAATACACTAGAGAAATGGCATTTAAAATAAACCAGAAGGAGAGCCATCCTGTGTGAATGATGCACCAGCTAAATAAGCTCCCTTTCAGATGCCTCCCAGAGTATAAACTGCAAGTGCTGGAGTTACCATATATACGGCAGGAGCTCAGCATGTTGATCCTTCTTCCAGACGAAACTAAGGATGGATCTGATCCTCTTCTCAAGCTGGAGAAAGAGTTGACTCTTGAAAAGCTGCTTGACTGGACCAACAGAGACAAAATGGACACACAGGGGGCGGTCATTGTCCATCTGCCAAAGTTCAAGTTGGAGATTGAGAGCTGTCTTTCAGAAACACTGGAAAAGATGGGCATGAGCTCTGTGTTCCAGGAAACCAAGGCTGATCTGACAGGCATGGGCAGTAATGGTGGTCTCTTTGTTTCAGCAGTGATTCACAAGGCTTTTGTGGATGTCAGTGAGGAAGGAACTGAAGCAGCAGCAGCTACATGTGTGTATATTATAACTAGTTATGTCCCCCGACCAGAACCTCGATATTATTTCACTGCAGATCACCCCTTCATGTTCTTCATCAGGCACAACCCCTCAAACAACATCCTCTTCTTGGGCAGATACAGAAGCCCATCCTAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000055431

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00034514 True 1155 unprocessed_pseudogene 0.47 6 26899745 26902268

Neighbor

gene id symbol gene type direction distance location
XLOC_017350 ftr97 coding upstream 4154 26892761 ~ 26895591 (+)
XLOC_017349 serpinb1 coding upstream 11047 26880668 ~ 26888698 (+)
XLOC_017348 NA coding upstream 193716 26704384 ~ 26706029 (+)
XLOC_017347 foxc1b coding upstream 195414 26702377 ~ 26704331 (+)
XLOC_017346 foxf2b coding upstream 206801 26690036 ~ 26692944 (+)
XLOC_017352 rwdd2b coding downstream 2890 26905158 ~ 26915916 (+)
XLOC_017353 serpinb1l2 coding downstream 14371 26916639 ~ 26919945 (+)
XLOC_017354 cdca4 coding downstream 37474 26939742 ~ 26946248 (+)
XLOC_017355 si:dkey-177p2.6 coding downstream 45532 26947800 ~ 26962841 (+)
XLOC_017356 ahsa1a coding downstream 64457 26966725 ~ 26974248 (+)
XLOC_017344 BX537272.1 non-coding upstream 304866 26594764 ~ 26594879 (+)
XLOC_017340 NA non-coding upstream 540311 26095530 ~ 26359434 (+)
XLOC_017339 AL954831.1 non-coding upstream 833801 26059710 ~ 26065944 (+)
XLOC_017331 CR352243.1 non-coding upstream 1255990 25643044 ~ 25643755 (+)
XLOC_017362 NA non-coding downstream 206438 27108706 ~ 27113992 (+)
XLOC_017363 NA non-coding downstream 292584 27194852 ~ 27198481 (+)
XLOC_017365 NA non-coding downstream 394876 27297144 ~ 27372450 (+)
XLOC_017366 BX255913.3 non-coding downstream 435738 27338006 ~ 27338121 (+)
XLOC_017368 dre-mir-203b non-coding downstream 503610 27405878 ~ 27405962 (+)

Expression


Co-expression Network