XLOC_017397


Basic Information

Item Value
gene id XLOC_017397
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 29178710 ~ 29228306 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036606
cgcagctctgcaaagtttagttccaaccctgcttcaacacacttacctgtagatttcaaacaaaCCTAATGGACTCAGTTAGTTTAATCAGatgtgtttaatcagggttaaagctaaactgtgcagagctgcggccctccaggaactggatttgacacctgtgtcgAAAACTCTTATGCTCCCTAAGAAGTGTGTCTAAAATACTTTGTTCAAACACTGCCTGCGAAGGATACAAATCAGCTGCCTGATTCAGATACAGCCAATGAATAAACACAAGAAATATGGTCACATATTTGATAAGAAACAATATAGCGATATGGTTTGTGACACCGTATGCACAACATACACTAAAACATATAGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036606 True 361 lncRNA 0.40 2 29178710 29228306

Neighbor

gene id symbol gene type direction distance location
XLOC_017396 NA coding upstream 139480 29031156 ~ 29039230 (+)
XLOC_017395 AL928866.2 coding upstream 166168 28995857 ~ 29012542 (+)
XLOC_017394 gpr176 coding upstream 204401 28960340 ~ 28974309 (+)
XLOC_017393 acot20 coding upstream 239980 28935413 ~ 28938730 (+)
XLOC_017392 slc10a1 coding upstream 310962 28861435 ~ 28867748 (+)
XLOC_017400 NA coding downstream 3250 29231556 ~ 29269362 (+)
XLOC_017401 fmn1 coding downstream 208295 29436601 ~ 29469228 (+)
XLOC_017402 BX248136.2 coding downstream 286608 29514914 ~ 29520273 (+)
XLOC_017403 ywhaqa coding downstream 337600 29565906 ~ 29585336 (+)
XLOC_017404 adam17b coding downstream 358223 29586529 ~ 29613629 (+)
XLOC_017391 AL928866.1 non-coding upstream 326427 28850233 ~ 28852283 (+)
XLOC_017389 BX901928.1 non-coding upstream 469687 28708907 ~ 28709023 (+)
XLOC_017388 BX569801.2 non-coding upstream 532645 28641979 ~ 28646065 (+)
XLOC_017406 BX255963.2 non-coding downstream 452623 29680929 ~ 29683555 (+)
XLOC_017409 NA non-coding downstream 803272 30031578 ~ 30084286 (+)
XLOC_017410 NA non-coding downstream 938828 30167134 ~ 30178215 (+)
XLOC_017412 NA non-coding downstream 1158718 30387024 ~ 30431438 (+)

Expression


Co-expression Network