XLOC_017402 (BX248136.2)


Basic Information

Item Value
gene id XLOC_017402
gene name BX248136.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 29514914 ~ 29520273 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00034600
GAAAAAattataaacatgtatttatttgacTGCATTCagaatagggctgtgcgatatggcCAAAAGAAACCAGAACAGACctatgacaaaacaaaacaaaatatgcatACCTCTTTGGGACAATGCTGTGAAATCGGTCGTTTACATATCGCGCACAAGTCCATTACTCCCAATGGATTGAGTGCACATATTGAGAGCGGCACACGCGTGTATTCCAGGTGCACCCAGCTAAAAAAAATGTTGCACGGCGAGTCAAatcagtcgatatcgatatttatcacatttgtttttcacattttagtacagtcaggatacccgagtaaacaacaacaacaattaaataaataccttcAATATAGACCAtgcagccatcttaattttaagttcttcttcaaaaacaccgTAATGTCCACATTCTCAGtaaaatacactGCAGTTTTGTCTGAACCTAATGtggatcagcaaaaagcagagagtgggctttgTAGAATGAGAAGATATGAGACGCCCAATAATGAACTGTTAAAAGTTTCAGTTAGAGGAGTTAGAGGAAAATCTTCCATCATCCTGCTCTTTCCCGACAATATTGAGCTAGCCTATATCTCCTCAAGTTCACTCTTTTCTcagagtaaggtggatagggaagatgtcgtacgacttccatcacagggaAGAATGCAGCGCACTGCCCTGAAGGACTTTTCTTTCTTTGCATCAGTTTTTAGCGAGgaattagaattgttttgttatatttctttcttttgtttggcttCACTATCATCCCCTTACTcaagtttaactaatttttCCTGTAGAGCAAGCTTCAATGTCATATCTTTCGTCTGTCTTTTTGGGGTAGTTGCCCTGGTTTACCAGCAGTTGTTTAgAAGTCATCTTGCGCAGTTTGCAGTGCACGTTGCTGTTTGTCGGATAGCAAAAAAcaatgtctgtgactctGACCTTTTTACCTTATTTTCTTACTCCTTTAAGTACAActatggctgtaaacttgtaaGCAATTATCGAAAtgtcattatcgttttatcgAAATTTTTttatatcgtgataattatcgatatcgaattatcgcccagatctacctcagacaaacacaagaTTTGTTATTCTCTgggaaaatggttgatggtcaccAAGGAGCGACCACAAAGCATGTTGAAAATACTGAAGGAAGTGACGCACTCACTCTTCCCACACCCTTTTAGACGCAATGCACGCTACGTTGTGATTAGTTTAAAGATCATACTGCAGGAAAATCATGCTATAAGGCGATTTAGAAATTGTTCATGccctaattcaGAACAGAAAAGttcaaatgtaaataaaagtacactttcaaacgaatcCTGGAGAGagagagagagtgagagagggaaaaaaacattagctgatggatcgttggaaatatttctggaagatgaccatgtcgcagTATACATTAACCAGAAATACAATCAGCCAGgtatcatttgttgcccttggtccagaTCAAAtacaagttttacaaaaatgAGAAAAAGCATCTTACGTCTCTTTTTGAGAACTAGGGACTTGCGCTTCAGATTTGTGATGAAAGGACTGAAGACTGATAATTAccaatatgatatgatatgcaaaaataaatatctagtgaaatggttttacctttattattcttcttcttggCTGCATCATGAGaaaaaaaaatctgaaatccta

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000112254

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00034600 True 1716 mRNA 0.38 34 29514914 29520273

Neighbor

gene id symbol gene type direction distance location
XLOC_017401 fmn1 coding upstream 45686 29436601 ~ 29469228 (+)
XLOC_017400 NA coding upstream 245552 29231556 ~ 29269362 (+)
XLOC_017397 NA coding upstream 286608 29178710 ~ 29228306 (+)
XLOC_017399 emc7 coding upstream 289781 29217835 ~ 29225133 (+)
XLOC_017398 katnbl1 coding upstream 298678 29209615 ~ 29216236 (+)
XLOC_017403 ywhaqa coding downstream 45633 29565906 ~ 29585336 (+)
XLOC_017404 adam17b coding downstream 66256 29586529 ~ 29613629 (+)
XLOC_017405 asap2b coding downstream 114380 29634653 ~ 29675458 (+)
XLOC_017406 BX255963.2 coding downstream 160656 29680929 ~ 29683555 (+)
XLOC_017407 mboat2b coding downstream 170628 29690901 ~ 29743160 (+)
XLOC_017396 NA non-coding upstream 475684 29031156 ~ 29039230 (+)
XLOC_017395 AL928866.2 non-coding upstream 502372 28995857 ~ 29012542 (+)
XLOC_017391 AL928866.1 non-coding upstream 662631 28850233 ~ 28852283 (+)
XLOC_017409 NA non-coding downstream 511305 30031578 ~ 30084286 (+)
XLOC_017410 NA non-coding downstream 646861 30167134 ~ 30178215 (+)
XLOC_017412 NA non-coding downstream 866751 30387024 ~ 30431438 (+)
XLOC_017418 NA non-coding downstream 1382265 30902538 ~ 30906716 (+)

Expression


Co-expression Network