XLOC_017562 (man1a1)


Basic Information

Item Value
gene id XLOC_017562
gene name man1a1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 41021054 ~ 41242638 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00034889
GGTTCAGTTGAGGCTGCTGGGACCCCGTTCGCGCAGTGGGATCAACTTCTTTCATAGGATCTACCGCGTCCTACTCGGACACCTCGACTTCAATGTAACAGGTACCCAACGCGGCGCAGCGCAAGGTGATCGGGGAGTTACTTTGTTGCCAAAATCTGACACATTTAGACGGGCTTTTAAACGCAGAAGAAAATGCCTGTAGCTTCTCTTCTGCCTTTCACGGCCACTCCGAATAGGAAGTCCGCCAGCCCGACCTCCTTCAGGCTCACGGAGAAATTCATCTTGCTTTTAGTGTTCAGCGCCTTCATCACGTTGTGTTTCGGAGCTATCTTCTTCTTACCGGATTCCTCTAAGCTGCTCAGCGGAGTTTTCTTCCGCTCGTCCTCGGTGGAGGCAGAGACGCGCGCAGGTACGGTCAGTGACACGAGCACCGGGACGGGCAAAGATGAGAAGATCTTGGCCAAGATCAGAAAAGACCACGAAAAAGCGCTGCTCGAAGCCAAGGACACCTTACAGAAGCGGCCGGACGAGATCAAGGAGGACATCAACAACGATAAGATTAAATTTGAGCAAAACCGACCGGTGAAAGATGACAGTTTGCCGTTCGTACCGTACGTGCGACCGCCTGGAGCAACAGGGCACGAGCCCGCAGATCCTGACATTAAAGCTAAAAGAGCCAAGATTAAAGAGATGATGCAGTTTGCTTGGGACAATTACAAGCACTACGCCTGGGGATCCAACGAGCTGCGGCCTGTCTCCAAGCAAGGCCACTCCAGCAATTTGTTTGGTAGTCTCAAAGGAGCCACCATTGTGGACGCACTGGACACGCTGTACATTATGGAGATGTATGACGAATTTGAAGCCGCTACCGAATGGGTGGAAAAGAACCTCGACTTTAACATGAATGCTGAAATCTCCGTCTTTGAAGTGAACATCCGTTTTGTCGGAGGCCTTCTGTCTGCCTATTATCTCTCAGGCAAAGAGGTGTTCAGGAAAAAAGCTGTTGAACTAGGAGAGAAGCTGTTGCCGGCTTTCAAGACCCCGACCGGCGTCCCATGGGCTCTTCTCAACCTAAAGAGtGGGGTCGGCAGAAACTGGCCATGGGCATCAGGAGGAAGCAGCATTCTGGCCGAATACGGGACGCTGCATTTGGAGTTCATGCACCTCAGCGCACTTTCCGGGAGACCGGTCTTTGCAGAGAAGGTAATGAACATCAGAAAAGTGCTGACTCGGCTGGACAAACCTCAAGGGTTGTACCCCAATTATCTGAACCCTAACAGTGGACAATGGGGCCAGCATCACGTCTCAGTTGGAGGCTTAGGGGACAGTTTCTACGAATACCTGCTGAAGGCCTGGCTCATGTCAGACAAAATTGACGAGGAAGGAAAAAAGCTCTACTATGATGCCCTGCAGGCGATTGAGAAAAATCTGATCCGGAAGTCGAGCGGAGGGTTGACGTATATCGCCGAATGGAAAGGTGGACTCTTGGAGCACAAGATGGGTCACCTGACCTGCTTCGCCGGCGGGATGATCGCTTTAGGAGCAGACGGAGCCCCTGATGAGAAGACGGGTCACCAGATGGAGCTCGCGGCTGAGATCGCCCGCACATGTCATGAGTCTTACGTCCGAACAAATCTGAAACTGGGTCCTGAGGCGTTTCGTTTCGACGGCGGCGTGGAGGCCATCGCCACTCGGCAAAACGAGAAATACTTCATCCTGAGGCCAGAGGTCATCGAGACGTACATGTACATGTGGAGGTTTACCCATGACCCCAAATACAGACAATGGGGCTGGGAGGCAGTGCAGGCTCTGGAGAAGCACTGCAGGGTGGAGGGAGGTTACAGCGGAGTGCGAGATGTTTACAGCAACAATCCAAACCATGATGACGTGCAGCAGAGCTTCTACCTGGCTGAAACGCTCAAatatcTCTATCTGCTGTTCTCAGACGACGACCACTTGCCCTTCGACCACTGGGTGTTCAACACAGAGGCTCATCCCTTACCCGTCATCAAGAAAGAGAGCCCAGAGTTACCAAACCATCTCAAGTAAACTTCATTCCATCTCAAGAAACGCCACTGAAACACAACTTCCTTCGGCAGTGGACAAGAGCAATGGACGTCAAAGCGTTGCGGCTGGAGAGTTTCTATCCTCCAGGACTCCTGCTGGAGCTTTATGTGTTTTCCCCCTTCCTCTGCCGTCTCTTTTCAGGAATCTGCATGCTGCCCCCTGCCCTCCTCctgctctcttttttttctgtcctTAACACTATGGACACGTTTCTGAGCCTCGGAGACCCAGAAGGACCATTTTTTTCCTCTGTGAGGAGACCAGACCGTTTTCCATCACACTTGCCCTCTCACACACTTTATAAAGCCATAGGTGATTCAAAGTACGTCCAcatctttttgtattttttttttttttttggcatcatGTGTGTTTACATGAGCGAAGATGTGAGATCTGTCTACTGAAACTTCGCCGGCGTCTCTTgctgtctgttttttttcttcggcGTTGAGGTTTGGTTCAGTATTTTGAGGCTTTATTCGACAGCAAGGTAGTGAAACCAAGTCAACTAGTGCCTTTTAGTCTTAACTGATCAATGTAGTCCATTTTTAATAGCAACGCTCCATTTAATTTCGCCGCAAGCGTCGTTCTACCCTCATTAtggatatacactacctgacaaaagtcttgtcacctatccaagttttaggaacaacaaataataacttgacttctagttgatcttttggTATCAGgactcagagttcatcaagattctttggattcaactTCAATACCTCCTCCATCTTACTCAAGGCATACTCAATAATGTcaatttctggtgactgggctggccattcctggagcaccttgaccttctttgctttcaggaacttttatgtggaggctgaagtatgtgaaggagcgctatcctgctgaagaattcgccgttttttgtagtttgtaatgtaatgggcagcacaaatgtcttgatatctcaggctgttgatgttgccatccactctgcagatctctcgcacacccacatactgaatgtaaccccaaaccatgatttttccttcaccaaactttactgaactgtgagaatcttgggtctatgcgggttctaataggtcttctgcaggaTTTGGGACGATTGGGAGgcattcaacagatgatttatctggaaaatctgccacttttccaaatgatcaactagaagtagaacaagttattatttgttgctcttacaactgggatcgacggcaagacttttgtcaggtagtgtagagtcGTTCATTCGTGAGCTTACTTTTGTTGCATAGAATGtgtaaaaactgttttaattgtTTACTAAATCAAAGGAGGACGAGactttttatctttgacatgtATAATAGAGTACTTTgtgttaatttattaatcaagAGGGTGAAGGGGGTCTTTATTTTTGTAGGTGTGGAGGGCAGGAATCTACAGAGCTTCTAATGGGATGTGGTGATGGAAAAATTAGATGATAGAGGGGAATTATATTTCGGTGATTTAGTGTTTGTTTGCAATAACATTGTGTTCCCTGAATGAACTTTGCACCTGCTTGTGAATCTGTTGTGCTTCCCCACCAAAATGAGCATTCTCTTATTAAAAGTACGGCTTTTATGTAATTTGTGAGGATATTTTCTCCTGGGAATGGCAAGCAATGcaaagtatttaattttttgagaAGCTTCGCATTCCTTTAGAAAAGTTCTTTCAGAAATGTATTCCATTTTCTAACAAATGTATTACATTCCCTCTAGAATTATTCTATTGCACAACAGTTGCGTTCTCTTATAATCTCTCCCCATTGATGCAATAGTTTTCTAAGAGGACATACAAACAATCAAAATGATTGGTATATTTCTTTGAGGAATGCAATGTTAATTTAGTTACCCAAAATAGCTTGACACAAACAGaaacttaataatattaacaataatacattttgtttataatgcgcttttctaaaacccaaagcgcCATGTTTCCTTTCAAAAATGAGTTTTCTAACAAAGAAATGTTGTTGCACTAAAATAGTTTGTTTTCCTGCTTAAATAAATCATATCATCTCCTTTTTAAAAGTTTAGCTAATGAAAAGTTTTTCAGGGAAATTAAAAGCTTTGTGAGAGAAAAACATTTCTCAAGAGATCTAAAATTTGGCAAGCAAGTTTGCAAGAACACAACAGATTTTGGAGCAGTGCAGAAGTTTGTTTGAAGATGATATAAATATAACTTTCCcttcctggggtccgttcttcatacatggattactcaattagctggatttggttactgaccatttgacatgatccaggattgttttTCAATCCATAGCTCAAACATatgaacaggattagatcgggtcttttcaagcaaaggtaatactgaaagtacGGAATCTGATAtcttcttatgctgtgttcacaccagacttAAATCGCACATCCGCATGTAAGAAGATGCATGAACATTTTGAgatttactcgcttcatttgtgcGTCAAATTCGTTTCATTtatgcgtcaaattcacttcacaacagacgcggatttgcatcatgggcagggtttctgtctgcccggtgactttagttttgttgctaaatggctaacatggattttattgtgagaatagctgtgtttatgtgctttaggaagactgaaaaacagcgcaGATTCGTTTGGAGCCATGTCTTAGTCCACaagatccattcagaggtgcacctagctctgtgagctcataaacccctccagaaactatacctggatgaggGAAGCTTTCAGCAGTACTTCCGGCAccagccgagcccagtttgatcaactgtaTTTCGGTTCGacaggaggatttcccctcgggacaccaactACAGGAACTACATCATAATCACttccctacaagagcaagctcctgattggttaacgcggtgcgaatgtctgctaaagttcagattttccagaTTTTCATGTCAATCATGCAAAACACTCAACTCGCGCCGCTTCATTCGGGCAAATTCAGTCTTTTGTGCATCTCATTTGCACGTATCCCGCCGCAAGAtgtttatttgcatctttgcattgacttaacactCGTAAATCACTCGTGCCTGGTGCTTCTTCCGTGtctagtgtgaacgcagcattacagtAGTACTTATATAGACTTGGGGGAAAAaagtatgcaatctgcactccaaaaTAACAGAACAAACAGTCACGGGGTGGTTCTCCCCAAAGGGTTCAAAGAGAGTGTTTATTATTATGGATTTTTTAGACACAAATGCACACCAAGGTACCAGCTTTAGTACAGTtcgtgtatgataatagacatgcacaatattcgattttttttttaacaattaaaatacaaTGCACATGTTTTGACAACTAAGATGAGAGTGATTTGATGttttgcaaaagttgcagacgcctttaccaacaTCAAaccgctttttttttttgatgcagaattcatttaaatatacagttattCCTGTATATACcgattaagaaacttgaataggcctgggctaatataataaagaaaattcattctaaactaaataaactaaataaattgctaaatactctcaacacatgaaagtgtaaagcctgcaacCCACAACAGATGTAAAAAtgtattgcgtatcatatttaacaaactttttactacaaattttatactgttttgctcacatggataattgaatattaatcagatgatgtcataacactgctgtgccgtcagccatgTTGCATTGCTCATCACAATTTCGAGGATCGATATAGATCTGTCCCTCAAAACACATGCAGCGATATCATGTCAGTTCAtctagacattttaatctgattccaaattagccagagatcagctATCAGGATTAAATGTTCCAGAATCTGACAAATCATCTAAGATTGTTTtagcaaggtacgaagaacggacccctgatttttatttgtttattaatattatttaccatCACCACGTTTTCTGGACTTCCATTGGAAACAGCGATAAAGCTGCTTGaatcttttgtgttttattaggACAAGATGGGCAGTGTTCGTAAAAAGGGGAGTGAATATTAGTTTGAATGTACCACCAAATGTGAATTGAACATACTTTGGCCTAGCTGTTGTGATTTATCATTTAATCTGTTTGTCTGTTCGTGTGTTCGTTTGATTTAACATGAAAGCACAACGTTGTGAATCAGTATATTGGGGTTCTCCGTGTAGAAAAGGATAGGACAATTACTGTAGGATGACAAAGACGGCAAGTTCTTTAAATGGAAAACAAGATGCAAACCAATGAATTCAAAGCAGTCCATACCACTggatacaacacacacaaacacacacatgatgaAGTAATAATGCATTCACATCACATACACTACAACACATTCCAAATCATGCACAAACAATTGGATCAGTTTCCGTCTTTAAAGTCCGTGTGAGTCGGAAGTTGCTGTGACTTTTatattgatgtacttccaactgaaatggaattttgagtagggggcggggctttctgttTGCATATCATTTTCTCGTAGCAAACTAAACATAAAAGGGGTGTGGTTAATAATATCGTGGCTGAAACCGGCAaacggtttaacatctcatctgaaaaacAGCGCTCACCGTGCTGTATAGAtttcccttcactatactggggcgttaggtcccacacagactgcaggttgattcAAAACCTGCGCCAGCAAAATAAACGTAAATTGTGATATCACACGGACTTTAATGATAGATTTTGTGAAATTGACGCAGGGCGTGCTTAAAAAAACGTCTATATTTAGCTAGCTATATTCAGTTTCCCAAACCCATCATGTTTAACTAGTATGGTGTGGTGCTTTAAACAATGTATTATACTAGCGGATCTACATGGGGAAATGATAAATACTAATACCTCGCAGGGATTCCTCTTTTGAGGCCAGCGACTGCAAAACTTGACATGGTATTTCTGCGCTGTACGTATGTATGCTAGCGAAAGTGCGTGCTGTCGGAGTTCGGAAGCGAAATAAATCAAAGTACCGTCATCTGGAGGGAGGCCTGTCATAAAACACTGTGACACTGTAGATAAGACATCGCATTCACTGTATTCATGATACTGCGAATCTAAACCATGTTTAGCACTGCCGCGGCTTAGCGTGGGCTAGCGCTTTGTGCTGTCTCTTTCGTGAAAGTGATTCCTCAAGCTGTGAGTGAGGATTCGCAGCAAATCTTATGCTGGGTTCAACAACAAACGCGGAATTAAGTAATTGCGCAAGTAATTTACATACAAAGTTGATGCGTGAATAGAGGTGAATTATCATCGTTCATGAAAGTGCAGGATTTGCCTCAATTGCGTCTGTCGCACAAGTTCAAGTAAATGTCGAAAATTCAGATGAGGAGGGAAAACATTCTGTGAGTAAACTAGAGCGAATGATAGCATTTGGTGTGAACTCAGCATTTGTGACATTCGGGAACAGACGTTTCCTCGCAGATACGCAGAATAGAAGACGTGCTTTTCAGATTAAATATTAGTTGTTTAAATATTGTGTTGATGATCTTGCATAGAAAATGCCTTTTTGTTTGTGATTCTTGTTGTTCGTTACTTCTTTTATGAGACAACCTCAGAAATGTAACTGTACAAAATTGCTGATAATCATTCCATTGCACATAGTCggattttggttttctttatatATGCAATTATGTTTGTGGGAAATTGTTTggttatgtttaattttattttttaatttgtctttctttttttaattgtacatATTCCATTCTGGCAAACTGCCAGCCATCATTTATATAAATCTTAAGATCTtatgtaataaattatattaaagagCAGCAAAGGTTTTTGATAAACTATATTTGTTACACTTCAATTGTGAATAAAACAATCTTTTATTATAA

Function

symbol description
man1a1 Predicted to enable mannosyl-oligosaccharide 1,2-alpha-mannosidase activity. Predicted to be involved in N-glycan processing. Predicted to act upstream of or within carbohydrate metabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi membrane and endoplasmic reticulum. Orthologous to human MAN1A1 (mannosidase alpha class 1A member 1).

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0006491 N-glycan processing biological_process
GO:0005783 endoplasmic reticulum cellular_component
GO:0000139 Golgi membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity molecular_function
GO:0016798 hydrolase activity, acting on glycosyl bonds molecular_function
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041014-321 Predicted to enable mannosyl-oligosaccharide 1,2-alpha-mannosidase activity. Predicted to be involved in N-glycan processing. Predicted to act upstream of or within carbohydrate metabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi membrane and endoplasmic reticulum. Orthologous to human MAN1A1 (mannosidase alpha class 1A member 1).

Ensembl:

ensembl_id ENSDARG00000005652

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00034889 True 7969 mRNA 0.42 12 41021054 41242638

Neighbor

gene id symbol gene type direction distance location
XLOC_017561 NA coding upstream 76143 40927131 ~ 40944911 (+)
XLOC_017560 NA coding upstream 133033 40869895 ~ 40888021 (+)
XLOC_017559 tbc1d32 coding upstream 180061 40766645 ~ 40840993 (+)
XLOC_017558 cx28.1 coding upstream 246197 40739964 ~ 40774857 (+)
XLOC_017557 NA coding upstream 502727 40488004 ~ 40518327 (+)
XLOC_017563 NA coding downstream 5821 41248459 ~ 41473366 (+)
XLOC_017564 fam184a coding downstream 306562 41549200 ~ 41799828 (+)
XLOC_017565 mcm9 coding downstream 559275 41801913 ~ 41839744 (+)
XLOC_017566 NA coding downstream 616639 41859277 ~ 41963921 (+)
XLOC_017567 NA coding downstream 921028 42163666 ~ 42164250 (+)
XLOC_017553 CR847530.2 non-coding upstream 1099948 39920443 ~ 39921106 (+)
XLOC_017552 NA non-coding upstream 1138694 39848711 ~ 39882360 (+)
XLOC_017568 NA non-coding downstream 960512 42203150 ~ 42203533 (+)
XLOC_017569 NA non-coding downstream 978096 42220734 ~ 42223897 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000029_02976262_03013586 MAN1A1 coding CI01000029 null 2976107 ~ 3013913 (+)