XLOC_001767


Basic Information

Item Value
gene id XLOC_001767
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 121898 ~ 133969 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005787
acacacacacacacacacagagagagagacggaACACAAGTGAATATTCAGATATGGTTTATTTATGAGCTTCTTGCGACAGAGTAATCATCTAAATCAACAAGAAAATCAGAATGAGTCGCTTGTCGTATGCGCGCTGAATCTGTTTAAACACCGTGTGTAATGTGCCGTATTATGGCTTGTGGAATAAGCTTTAAAGACGGATCTGAAGACGATATAATGTGGGTATTCCTGATTTCATATTTCCCCAACTCAACAGAGATGAAGAAAGGAAAGCCTCTGACGTGACGTGACGTGATGGCTTCGTATCAGCAGGGCACTTTAAAGGGCACTTCATCAATCGTGGAGCGCTGGAGCGATGCGCTGTCACTGTGCAGAATCAGCGGAGGACTCCAGTCTCAACCGGGCACAGATGTGCGGATCTACAGACACATCGGCCAGACTCAAGAACACACGGCCATAAGAGGGATGTCTGTGAGTCCTGGTCCTGTAAATCCCTTGAACACGATACAGCGCAATCTGAGCTCTGGCAAATGTAAGTTCAAGTCCAGAGTATACTtcatgttcagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagcacttTTGAGCTGTGGAAAGGTCTTCATCCTGAACACAACACTCTTTTAGTCTTCAGTAGTTTGCTGTTGTTGTTCAGTGAATCAGTCGCTCAGTGATGACCCCTTGTGGACAAACTAATAAGTGCAAAAAATCAAATGGGCATGTGCAAGTGCAATATAGTTCTGAAGTGTTCTGATGAAGTGGTGTACTGAGCTCTGCACGCCTAATTAACAGCAGAAGTATACTCTGGGCTTTAGTATTGAACAGACTTGTTATGGAGCGTTCTCTTGATGCATGCATTATCTTATTTGATGCAAATGAAAACAAGGCTGCTGAACAAACCCCTTAACCTGCTGCCATTGTCCATCTGCAAATCACTGCAACAACACTGAACAGAGCAGCCGGACGCAAACCATCGAGGATTGGAAAGTGGCGATTCCACTGATCCAAGATGGAAAAACGtcttgcaattctgagtgtgctcctcacaggtgagtgggcttgacaaaccacctgtagtacACACTCTTTCCAATCTGTTTGCTTGAATGTGGAAAAACAATCGTAAACTGCTTCAGCAGGAGGTAAAGTGCTTCTCTTGTCTCACTTGTGGGTCACTTCGGATGAAAGCGTCTGTTAAAAAGTGAACGATCCCGCATTACTGTCCGCCACTGAAGCCCTGTGGACGGCTCTGGATCTTCAGCTCTGCTAGATATATTCTGCAGGAGTTCCTCAGGGGTCAGTTCTTGGACCTCTCCTCTTCCTAATTTACACCACATCACTGGGAGCCATCGTCTGATGACATAGTGTTTCTCCTGTAATCAACTGCACATAGTGTTGTCAGAAATACTGATTTCAGTACTGAATagtaattaaattttataaacGTCCATTTCCCTCAAACACCTGAGCTCTTAAACACTGTGGATGATCATTGGAGCCAATCAGAGTTTATTTCTGCTGAGCGTGTGAACACAATTAGGGTTAGGGTTCTGTGGAAACAAGGCATAAATCAATTTCCAGAACATTTTCCTTCACGGTTCCTCACTGGTGGAATGATCTCCCCAATCCCAAACAGAAAACTGAAGCTCATCTCCTCTGTGAAGGTGTTTCCTCTCTCCTCATCTACTCTAGCCTGTATTGCTGGCTCTTCCTGGGAGCACTGCGTCTTTAAGATCAGCCGCTTGGTGCTTTTCTCGTTTGTAAgtggctttggataaaagcatctgctaaatgtaatGCTATGATGATCGCTCATCTGTGATTATCACTCCGCCGTAAACGACCATGATGTGAACACGCCAGAGGAAACGGGAAAGACTGCCCTGGCATTGCTTTATTAAACTCAATGCAGATCTGAGACTGTGAGCGCTCTAGTGAGCTGGTCAGCGAGCGTCCGTCTGTCAGCTGTATGAAGTCTTGTCAGACTCTTTCACTACTTGACTGTCTGGCGACAGCACTTCCAGACGGCTCACACAGACGGGTCGAGATATTTAAGCTGGTTTACATCTCTCTCTCTGCATCTGCTTCTCTCATTAATTATTTAAGCACAGCGGTGGTCCCTCATGTGGGTTGTGCCTCCAGGACGACGCCCCGTCTCAGCCTTGTTTTCATTGGCAATGCTCATGTGCTGATCAATGTCGAGGCAAAGGTGACGTGAGGGTTCGGCTCTTTGGTCTCGTGTGCGCGCGGTGTTTATCTCGTGGTCAAACACACACATCTGCTGCTCTGTCTgacgacacaaacacacacagaagcgCTCGGCTGCATCGGGCGCGCTGAAGTTCAAATCCAGTTATGACTTAAAGGAAGAGAGAAAGATCATGGCCTGATGACGGTACGGAAGGTTATTGGAGCAGACATGCACGattacacgcgcacacacacacacacacacacactcacacaccatcATCAGCCCCACAATCCCATGCAACGCAACCGCACCGCCTTCAGCCTCCGGTTTGCATCCAGTACGGGGATCTCCTGCATGTATGGCCGACAGTACTTTAAATATGTACATCAGAGTCGCAGGACTACAGGGATCGAGTGTTCATGCGTGGATAAATATGTCTGCTGCTCTTCCAGAAGGCAGAATATACAGACGTGGAGCGACTCGTGTCGTATCAAACAACCTTACATCTCAAACCAAacgcagatatatatatatatatacaaaaaaatacaaatgcaaatgcCCTAGAATAGATCTATATATATGCTCATATACATATAGAGGTCTTCATCTCTGAATTACAAATCTGAAAATATCATTTCATatctttaagaaaaaaactgGTCTCTGAAACCATGCAGTGGCCCGCCAGTTCACCTGCGTCACGCCCTGGAGCCAGAAAAAGAGAAGTGCGTGTGATGGGGGCGTCCGTGACCTCGGCCCGCCTCGGGGCGCATTCCTgagctgacctctgacctctgagCCCAGCCAATGGTGCGGCGGCAGTGGCGCAGAGATCAGGAGAGATTCTCCCGTCCTCCTACACTTTGGACTCGCTCTCCATGTTGGCGACGTCTCCGTTCCTCTCCGTCAGCTCCTCCGGCGGCTCCTGCGGCTCCAGCTGGCTCAGTTTGCTGGCCACCGACCAGGTGAGCGGCAGGCGGGCGCGCGCCGTCATCTCGGCCAGCTCTCGCGCGCTGCAGCTGGGCGTGTTGGTCTCGTAGATCTCGTGGAAGCTGTTGTAGTCCACCTCGTAGAAGCCGTCCTCCAGCGTCAGCACTGGCGTGAAGCGGTAACCCCACTTGATCTCGCTGGCCACGTATGAGCTGCGCGCCTGACACGTCATGCCTGAGGGAGGAAACCCAGAGCCCAAGCCTGAAGCTGAGAGCTGGGTCCAGCAGGCGACGTGCGGCTGACCTCTCTGTGTCCTGTACTGCACTCCTGAGGGATTCTGGGAGACTTATTTCCCAGCATTTACAGCTGTGTATTGATCCTGAGCTATATTTGAGCTGTGGGTCCTGATAGGAGCGGGCTCCTGTTTCTCTGGGTGAAGCTCAGACTGTGCTGGAGGTGAAAATACCCTCATCATCCACTCGCTGCAAACAGTATATTCAAGTTTTGCAGGTTTGAAGAGGCATGagcttgagtaaatgatgaccagaCGCACATGCATGAACACTAACTGTGGCTTTAAGATCATCTGCtc
>TCONS_00005788
acggaACACAAGTGAATATTCAGATATGGTTTATTTATGAGCTTCTTGCGACAGAGTAATCATCTAAATCAACAAGAAAATCAGAATGAGTCGCTTGTCGTATGCGCGCTGAATCTGTTTAAACACCGTGTGTAATGTGCCGTATTATGGCTTGTGGAATAAGCTTTAAAGACGGATCTGAAGACGATATAATGTGGGTATTCCTGATTTCATATTTCCCCAACTCAACAGAGATGAAGAAAGGAAAGCCTCTGACGTGACGTGACGTGATGGCTTCGTATCAGCAGGGCACTTTAAAGGGCACTTCATCAATCGTGGAGCGCTGGAGCGATGCGCTGTCACTGTGCAGAATCAGCGGAGGACTCCAGTCTCAACCGGGCACAGATGTGCGGATCTACAGACACATCGGCCAGACTCAAGAACACACGGCCATAAGAGGGATGTCTGTGAGTCCTGGTCCTGTAAATCCCTTGAACACGATACAGCGCAATCTGAGCTCTGGCAAATGTAAGTTCAAGTCCAGAGTATACTtcatgttcagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagcacttTTGAGCTGTGGAAAGGTCTTCATCCTGAACACAACACTCTTTTAGTCTTCAGTAGTTTGCTGTTGTTGTTCAGTGAATCAGTCGCTCAGTGATGACCCCTTGTGGACAAACTAATAAGTGCAAAAAATCAAATGGGCATGTGCAAGTGCAATATAGTTCTGAAGTGTTCTGATGAAGTGGTGTACTGAGCTCTGCACGCCTAATTAACAGCAGAAGTATACTCTGGGCTTTAGTATTGAACAGACTTGTTATGGAGCGTTCTCTTGATGCATGCATTATCTTATTTGATGCAAATGAAAACAAGGCTGCTGAACAAACCCCTTAACCTGCTGCCATTGTCCATCTGCAAATCACTGCAACAACACTGAACAGAGCAGCCGGACGCAAACCATCGAGGATTGGAAAGTGGCGATTCCACTGATCCAAGATGGAAAAACGtcttgcaattctgagtgtgctcctcacaggtgagtgggcttgacaaaccacctgtagtacACACTCTTTCCAATCTGTTTGCTTGAATGTGGAAAAACAATCGTAAACTGCTTCAGCAGGAGGTAAAGTGCTTCTCTTGTCTCACTTGTGGGTCACTTCGGATGAAAGCGTCTGTTAAAAAGTGAACGATCCCGCATTACTGTCCGCCACTGAAGCCCTGTGGACGGCTCTGGATCTTCAGCTCTGCTAGATATATTCTGCAGGAGTTCCTCAGGGGTCAGTTCTTGGACCTCTCCTCTTCCTAATTTACACCACATCACTGGGAGCCATCGTCTGATGACATAGTGTTTCTCCTGTAATCAACTGCACATAGTGTTGTCAGAAATACTGATTTCAGTACTGAATagtaattaaattttataaacGTCCATTTCCCTCAAACACCTGAGCTCTTAAACACTGTGGATGATCATTGGAGCCAATCAGAGTTTATTTCTGCTGAGCGTGTGAACACAATTAGGGTTAGGGTTCTGTGGAAACAAGGCATAAATCAATTTCCAGAACATTTTCCTTCACGGTTCCTCACTGGTGGAATGATCTCCCCAATCCCAAACAGAAAACTGAAGCTCATCTCCTCTGTGAAGGTGTTTCCTCTCTCCTCATCTACTCTAGCCTGTATTGCTGGCTCTTCCTGGGAGCACTGCGTCTTTAAGATCAGCCGCTTGGTGCTTTTCTCGTTTGTAAgtggctttggataaaagcatctgctaaatgtaatGCTATGATGATCGCTCATCTGTGATTATCACTCCGCCGTAAACGACCATGATGTGAACACGCCAGAGGAAACGGGAAAGACTGCCCTGGCATTGCTTTATTAAACTCAATGCAGATCTGAGACTGTGAGCGCTCTAGTGAGCTGGTCAGCGAGCGTCCGTCTGTCAGCTGTATGAAGTCTTGTCAGACTCTTTCACTACTTGACTGTCTGGCGACAGCACTTCCAGACGGCTCACACAGACGGGTCGAGATATTTAAGCTGGTTTACATCTCTCTCTCTGCATCTGCTTCTCTCATTAATTATTTAAGCACAGCGGTGGTCCCTCATGTGGGTTGTGCCTCCAGGACGACAGAAAGATCATGGCCTGATGACGGTACGGAAGGTTATTGGAGCAGACATGCACGattacacgcgcacacacacacacacacacacactcacacaccatcATCAGCCCCACAATCCCATGCAACGCAACCGCACCGCCTTCAGCCTCCGGTTTGCATCCAGTACGGGGATCTCCTGCATGTATGGCCGACAGTACTTTAAATATGTACATCAGAGTCGCAGGACTACAGGGATCGAGTGTTCATGCGTGGATAAATATGTCTGCTGCTCTTCCAGAAGGCAGAATATACAGACGTGGAGCGACTCGTGTCGTATCAAACAACCTTACATCTCAAACCAAacgcagatatatatatatatatacaaaaaaatacaaatgcaaatgcCCTAGAATAGATCTATATATATGCTCATATACATATAGAGGTCTTCATCTCTGAATTACAAATCTGAAAATATCATTTCATatctttaagaaaaaaactgGTCTCTGAAACCATGCAGTGGCCCGCCAGTTCACCTGCGTCACGCCCTGGAGCCAGAAAAAGAGAAGTGCGTGTGATGGGGGCGTCCGTGACCTCGGCCCGCCTCGGGGCGCATTCCTgagctgacctctgacctctgagCCCAGCCAATGGTGCGGCGGCAGTGGCGCAGAGATCAGGAGAGATTCTCCCGTCCTCCTACACTTTGGACTCGCTCTCCATGTTGGCGACGTCTCCGTTCCTCTCCGTCAGCTCCTCCGGCGGCTCCTGCGGCTCCAGCTGGCTCAGTTTGCTGGCCACCGACCAGGTGAGCGGCAGGCGGGCGCGCGCCGTCATCTCGGCCAGCTCTCGCGCGCTGCAGCTGGGCGTGTTGGTCTCGTAGATCTCGTGGAAGCTGTTGTAGTCCACCTCGTAGAAGCCGTCCTCCAGCGTCAGCACTGGCGTGAAGCGGTAACCCCACTTGATCTCGCTGGCCACGTATGAGCTGCGCGCCTGACACGTCA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005787 False 3763 lncRNA 0.49 2 121898 133969
TCONS_00005788 True 3150 lncRNA 0.48 2 121926 125299

Neighbor

gene id symbol gene type direction distance location
XLOC_001766 pigp coding upstream 5862 110868 ~ 116036 (+)
XLOC_001765 vps26c coding upstream 40193 76864 ~ 81705 (+)
XLOC_001764 NA coding upstream 62150 58893 ~ 59748 (+)
XLOC_001763 NA coding upstream 91060 30360 ~ 30838 (+)
XLOC_001762 riox2 coding upstream 93700 23088 ~ 28198 (+)
XLOC_001768 KCNJ15 coding downstream 24621 158590 ~ 159597 (+)
XLOC_001769 ets2 coding downstream 53791 187760 ~ 196815 (+)
XLOC_001770 CU469093.1 coding downstream 77813 211782 ~ 211947 (+)
XLOC_001771 mpzl1l coding downstream 79909 213878 ~ 223885 (+)
XLOC_001772 lrrc32 coding downstream 118456 252425 ~ 257043 (+)
XLOC_001773 NA non-coding downstream 148355 282324 ~ 283931 (+)
XLOC_001776 NA non-coding downstream 264375 398344 ~ 398759 (+)
XLOC_001779 NA non-coding downstream 285264 419233 ~ 420892 (+)
XLOC_001786 NA non-coding downstream 406324 540293 ~ 543589 (+)

Expression


Co-expression Network