XLOC_018174 (acat2)


Basic Information

Item Value
gene id XLOC_018174
gene name acat2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 30922595 ~ 30931146 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035818
AGGACGTTCCGCAGTACAACCTGCATTCAGACAGAGTCAGCCTACCAAGCACATAACCAACCTACCGGACAGCAAAGATGAACACGGATGCGATTGTTATCGTTTCTGCCGCAAGGACTCCTATAGGGGCATTTAATGGAACCCTAAGTAGTGTACCCCTCCATGAACTGGGAACGCTGGTCATTAAAGATGTGCTGAAGAGGGTCAATGTGAAGCCAGAAGAGGTCTCAGAGGTCATTATGGGACATGTCCTGACTGCAGGTCACGGGCAGAACCCTGCGCGGCAGGCAAGTGTTGGTGCTGGTGTCCCATACTCAGTTCCAGCATGGAGCTGTCAGATGATCTGCGGATCTGGCCTGAAGTCTGTGTGCCTTGGTGCTCAGTCCATAATGACGAAAGAATCCACTATAGTGGTAGCAGGAGGCATGGAGAGCATGAGTCGGGCCCCTCATATAGTGCAAATGAGGTCAGGGGTGAAGATGGGAGATGCTACTCTGCAGGACACTATATTGACTGATGGACTCACAGATGCTTTTTATAATTACCACATGGGAATCACAGCGGAGAATGTGGCCAAGCAGTGGGGGGTGTCCCGTGAGGCTCAAGATCAACTGGCTGTGACGTCACAGAACCGAACTGAAGCAGCTCAGAAGGCTGGTTATTTTGACAAGGAAATTGTGCCAGTCACCGTTCCCTCTAGAAAAGGTCCAGTCGAGGTCAAAGTTGATGAGTTTCCTCGGCATGGCAGCAATATTGATGCTATGTCCAAACTGAAGCCCTGTTTTGTGAAAGATGGCTCTGGTACTGTGACAGCTGGTAATGCGTCAGGCATAAATGATGGTGCTGCAGCTACTGTTCTTATGAGCCAATCAGAAGCCCAGAGGCGGGGTTTAAAACCAATGGCACGCATCACTTCCTGGGCTCAGGCAGGCCTTGACCCTTCAGTCATGGGCACAGGGCCAATACCAGCTATTAGAAAAGCTATTGAGAAAGCCAGATGGAAACTAGATGAGGTTGATCTGTTTGAGATAAATGAAGCATTTGCATCTCAGTCTATTGCCGTAGTACAGGATCTTGGTCTAAACCCTGACAAGGTAAATGTGTGTGGCGGAGCGATCTCTCTTGGTCATCCTCTTGGCATGTCCGGCTGTCGTGTGTTGGTGACTCTTCTTCATGCTCTTCAGAGGACAGGCGGACGGAAAGGAGTCGCCTCGCTGTGTATCGGCGGAGGAATGGGCATCGCTATGTGTGTAGAGAGAGAATAAGGGCAAATGAACACCCTGTAATTTTGAGCTTTTAACCAGACTTTGAATCCAGCTTTTCACATTCAAAACAGATATGAAAACATATGGTAAAACTTAAGTATATATGCAGCGTTAATAGTAAGGAAACAGCCTGCAGTAAAATGCACTCAATTCTGCCTTCTTATCTAAACTCATCTCTAATGTTTCATCATATACAGTGGATCTGTTTTGCACTTAACATGTATTGATTCTCTTCGGGTTTATGGTACATGAAAAGGACTTGTTGAGGTATACCAGCTTTTAAGACATTCCCTTTctgtataaattgtttacagttgCTGAGACACTCATGTAGTAGAGCTTTTATTGGTACTAACAGTAGGCCTGTCCACATGCGTGTTAGTTATGACCTGTAAGTCATATTGtggtatttataaatattaaattcatCAGTTGAATGGAGTCGGTCCTGTTTCCAGCACCTTTTCCAGACCTGTCTACACTGTGCAATAGAAAACTGCCTTAGAGAATGTCAAATGTGCCAAAAAGTAAAATTAGCCTCTATCCTGTGCTTCCATTAGGCTGCTTTTAACTCTCTCTTCTCCTAATTAATACCTCAGGGGAAATGCTGTTTACTTATATAGCCCGTGTTGTACTCTTAATATCACTGCCTAATAAAGAACTTAATGAAGAA
>TCONS_00035819
GAGAAGTAGGACGTTCCGCAGTACAACCTGCATTCAGACAGAGTCAGCCTACCAAGCACATAACCAACCTACCGGACAGCAAAGATGAACACGGATGCGATTGTTATCGTTTCTGCCGCAAGGACTCCTATAGGTCACGGGCAGAACCCTGCGCGGCAGGCAAGTGTTGGTGCTGGTGTCCCATACTCAGTTCCAGCATGGAGCTGTCAGATGATCTGCGGATCTGGCCTGAAGTCTGTGTGCCTTGGTGCTCAGTCCATAATGACGAAAGAATCCACTATAGTGGTAGCAGGAGGCATGGAGAGCATGAGTCGGGCCCCTCATATAGTGCAAATGAGGTCAGGGGTGAAGATGGGAGATGCTACTCTGCAGGACACTATATTGACTGATGGACTCACAGATGCTTTTTATAATTACCACATGGGAATCACAGCGGAGAATGTGGCCAAGCAGTGGGGGGTGTCCCGTGAGGCTCAAGATCAACTGGCTGTGACGTCACAGAACCGAACTGAAGCAGCTCAGAAGGCTGGTTATTTTGACAAGGAAATTGTGCCAGTCACCGTTCCCTCTAGAAAAGGTCCAGTCGAGGTCAAAGTTGATGAGTTTCCTCGGCATGGCAGCAATATTGATGCTATGTCCAAACTGAAGCCCTGTTT

Function

symbol description
acat2 Predicted to enable acetyl-CoA C-acetyltransferase activity. Predicted to be involved in fatty acid beta-oxidation. Predicted to be active in mitochondrion. Is expressed in central nervous system; hindbrain; liver; neurons; and yolk syncytial layer. Human ortholog(s) of this gene implicated in coronary artery disease. Orthologous to human ACAT2 (acetyl-CoA acetyltransferase 2).

GO:

id name namespace
GO:0006635 fatty acid beta-oxidation biological_process
GO:0005739 mitochondrion cellular_component
GO:0016740 transferase activity molecular_function
GO:0016746 transferase activity, transferring acyl groups molecular_function
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups molecular_function
GO:0003985 acetyl-CoA C-acetyltransferase activity molecular_function
GO:0003988 acetyl-CoA C-acyltransferase activity molecular_function
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-990714-22 Predicted to enable acetyl-CoA C-acetyltransferase activity. Predicted to be involved in fatty acid beta-oxidation. Predicted to be active in mitochondrion. Is expressed in central nervous system; hindbrain; liver; neurons; and yolk syncytial layer. Human ortholog(s) of this gene implicated in coronary artery disease. Orthologous to human ACAT2 (acetyl-CoA acetyltransferase 2).

Ensembl:

ensembl_id ENSDARG00000007127

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035818 False 1938 mRNA 0.45 9 30922595 30931139
TCONS_00035819 True 656 mRNA 0.51 5 30926212 30931146

Neighbor

gene id symbol gene type direction distance location
XLOC_018173 kif25 coding downstream 2239 30902138 ~ 30920356 (-)
XLOC_018172 hebp2 coding downstream 21561 30894093 ~ 30901034 (-)
XLOC_018171 NA coding downstream 116121 30800868 ~ 30806474 (-)
XLOC_018170 NA coding downstream 456557 30465502 ~ 30466038 (-)
XLOC_018169 BX276180.3 coding downstream 547689 30374686 ~ 30374906 (-)
XLOC_018175 wtap coding upstream 268 30931414 ~ 30938246 (-)
XLOC_018176 NA coding upstream 34737 30965883 ~ 30973173 (-)
XLOC_018177 NA coding upstream 71042 31002188 ~ 31067306 (-)
XLOC_018178 AL929014.1 coding upstream 113929 31045075 ~ 31045205 (-)
XLOC_018179 fam166c coding upstream 141746 31072892 ~ 31075972 (-)
XLOC_017928 CU539064.1 misc downstream 20868894 10053405 ~ 10053701 (-)
XLOC_018168 BX276180.1 non-coding downstream 548511 30373865 ~ 30374084 (-)
XLOC_018167 BX276180.2 non-coding downstream 549168 30373207 ~ 30373427 (-)
XLOC_018183 NA non-coding upstream 626722 31557868 ~ 31744506 (-)
XLOC_018188 NA non-coding upstream 1205879 32137025 ~ 32139068 (-)

Expression


Co-expression Network