XLOC_018326 (si:dkeyp-114g9.1)


Basic Information

Item Value
gene id XLOC_018326
gene name si:dkeyp-114g9.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 41967312 ~ 41992878 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036076
ATCACACTTTGACCTTTCAGGTGGTTTCTTCCTAACCTTTAACACCGGAGGAGGATGCGGCGAGCATGGCGGTGACACCGGGCACAGGTATGGCAGACCTCAGCGCTACCTGGGAGAATGAGTTGCTGGAGCAGTTCTCATGTCTGACTGCCAACACGGAGGAGGAAGAGTCCTGTCTGAATACTGCAGATGATTTCACTTGGGACAGCAACGACAACACAACAGGCTTATTGCATTTGAGTGATGAAGTCCTGCTGGTTATATTGAGGAACTTGGATCCAATGTCGCTGCTGAGGCTCGGCAGCACGTGCAGTTTACTTTTCCGAGTTTCGTCGTGTAACTCCCTGTGGACCACACACTTCCAGGATTCGTTTGGGGTCAGTCTGTCAAATACCAACGCCATGTGTCCCGTAACTGCCAAAACCGCCTTCCGCTTAGTTTTTATGTGGAGGTCCCTCTTCAGAAATATCCACTGCAATCGTGCATTTCAGGAGAAGCTCTTCTTAGAGATCCCTCAAGCGCCGCATAAATACTGGATCCAGTGGCTGGTTCTGGAGGAGAGCGTCCCACTTCCCTCCGTCAGGCTGCCCTCCAGAGATGTGGAGAAGCTCTGGGGAATCACTGCTGATTTATTCCAGGACAAACTACAAGagaaAACTGAGGATTGTGACACTCTGAAGTTTGAATGGAGGGAGTTGTATCATCTTGCACTGGGGCATCATGGTAGTGCATCTCTGGTCTTCCAGCATGTTCTCAGCCAGCAGCAATACAATGATCACACAGAGCTGGAATCCATGTACCATCAGTACGTCCAGTGCAGGTTCCAGTGGCTCTTCACATACTGGTTGTTTCGCCAGCCCACTCCATACAACAAGCAGCTGCGCTCTATTTTCCTACAGTGGAAGAAGCACAGCAAGAGAAAGGTGTCCACCTGGGGAGAGACCCTGTGTGACGTGAGGTATCTGGCCTCCCTGCATCCCATCACCAAAGACTACTGGAGAGGACGATTGGCTCGGGGAGATGAGAGTCTGGGGATTCAGACGGTTGGAAACTACTTCTCCATGTGCAAGTCTCTTGTGGCCTGGATCTTGGGCCGCGACTGGGGCCGATTGAAGCGAAGAAAGGTTTATGAAGACACGCTGGAGGGAGTGTATCTTCTGCTCAGGCGAGAGATGCAGGAGACTCTGATCGAGCACGAGCGCTTCTGGCAGGTGGCTAAAGTCCAGATGAGCCGCGTCTGCACACTGGAGGAGACCGCAGCAAACTACGTCAACTGGAAGATGATCGAGACGCTCCCTTACTACAAGCTGTATCTGGTGTCTGGAAATTCTGTGTACCTGGATCATGTGCAAGGTTTCTTGCGGAGGAAGCGGTTGATCCGGGATTGGATTTACCAGGAGGAAAACACTTGGGCTCGACAGTTACTGCCTGAATCGCTGTATACTCTGCTGGAGTTTGACACAAAGATCTCCCAAGagaGTTTGCATGGGGACTCAGTGTGTGCTCAGCTGAGTCGAGTGATGTGGCTGTATCTAAACTCAGGTCAGCAGGAGTATCTGGAGGAGCTGAAGGCTATGGTGCTGCACTGTGCTCGGGTCTGTCTCGGGCAGATCTCAGTCAGCTGGAACTCAGCAGACTCACCACACACACGCTGATctgtttttactttaatatttttacatttttaatcgtGTTTTTTGGCCTCAAATATCTACATCTTAATTGTTTTTGAACACAGAGTAGTTTTCCCCCACAATTTCTTTTCATTCAGGCTTTTTTTAGTGCACAACTTCTCTCATCTTCTGTCTGAGTAAATGCAGAAatgcacatgttttttttatatatatatataagtgcaaTATGATAGTTTTAATCATGTTTTCTTTAGCATGTTGATTGTGGATTCCTTTCGATGTAGTTTTTAAACAATGGTTGTTGGTTTTATAAGTGCAATACAGTGGTTTTAATCTTGTTTTTAGCATTCCGAAATGTGAACTCCTTTCTGTGTTActgactttttaaattatttttttaaacatgggtTAATGGTATTATGATCTGCAAGGTTGCTGATTGATAAAAGCAACTTCACACCTGT

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-5466 No description available

Ensembl:

ensembl_id ENSDARG00000069401

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036076 True 2098 mRNA 0.47 8 41967312 41992878

Neighbor

gene id symbol gene type direction distance location
XLOC_018324 BX510919.3 coding downstream 614352 41352846 ~ 41352960 (-)
XLOC_018323 NA coding downstream 724643 41237704 ~ 41242669 (-)
XLOC_018322 BX510919.2 coding downstream 739133 41228064 ~ 41228179 (-)
XLOC_018321 hsdl1 coding downstream 1200694 40761717 ~ 40766618 (-)
XLOC_018320 cx34.5 coding downstream 1207095 40757141 ~ 40760217 (-)
XLOC_018327 slc35f1 coding upstream 5624 41998502 ~ 42203629 (-)
XLOC_018328 NA coding upstream 227856 42220734 ~ 42241456 (-)
XLOC_018329 dcbld1 coding upstream 303378 42296256 ~ 42378994 (-)
XLOC_018330 AL845314.1 coding upstream 412220 42405098 ~ 42405212 (-)
XLOC_018331 vgll2a coding upstream 438664 42431542 ~ 42439896 (-)
XLOC_017928 CU539064.1 misc downstream 31913611 10053405 ~ 10053701 (-)
XLOC_018311 NA non-coding downstream 1630413 40330106 ~ 40336899 (-)
XLOC_018309 NA non-coding downstream 1712827 40215369 ~ 40254485 (-)
XLOC_018335 NA non-coding upstream 764697 42757575 ~ 42760664 (-)
XLOC_018336 NA non-coding upstream 800681 42793559 ~ 42801425 (-)
XLOC_018337 NA non-coding upstream 813885 42806763 ~ 42819113 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000029_03382508_03395312 NA coding CI01000029 null 3382350 ~ 3395312 (-)