XLOC_018484 (si:ch211-221n20.1)


Basic Information

Item Value
gene id XLOC_018484
gene name si:ch211-221n20.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 52628875 ~ 52631998 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036302
GTTTGATTTGGTGTTCAGTGGTGTAGATGGTGTTTGACAGTCAGCGAACAGTCATGCGTTTTCAGTCAAAAATACAGCGTTTACAGCACGATATTGATTACAATATTCTGGAGAGAATGATTACACGAGATTCACCAGAGTTCAGGAGCCGCGGTCGCGCTGGAGGAGCGTCCGAACAGAGAGCTTCATCTGCGGCCGTCGTGGAGAACCAGACAGCAGaGATGCAAAGACGAGGACGGAGGAAGACGGGCGTTCTTTCATTCTTCCGGAAAATGGGAAAAGCTATCCATAAGCTTTGCTGTATGGATGCAGCAGCAACATCTATAGTGGACCACACTGACCCATCTGGTAGCGCTCGTGCTGTCGCCTCAGAATCGAGAGAACGGACTAGAAAGATCTACCTCAAGAAAGATTGCAGCAAAGTCATCTTGAGAATCGTCAAGGGCACCCCAGGGTCCCCGGATCCGTGTGGGGTCTGTGTTGTCTCCATTGACGTGGACCAACCTGGGATCTCCAGTGTGTCTGTTGACCCGGGACCTAATGGATTCTACTCGGATTCTTTTAGTCCGGGTCCACCTGGAGTCCTCCGCTTGTCCCTCGTCCTATGTCCATCTGGGGTGTTCAGTGTGTCTCTTAATGCTCGTCCATCTCGAGGCTGCAGGGTGTCTGTTGATCCCGGTTCGTCTGGGTTCTTCAGTGTGTCCTCTTATCCGGGTGCGTCTCGGGACTTCAGTGTATCTGGTAACCCGGATGCCTCTGGAGGCTGCAGGCTGTCTGTGGATAGGGGTCTGTTTGGGGGCTGCGCAGTGTCTGCTGCTCCGGGTCCGTCTGATTGCAGCATGTCAGCTGCTCCGGGTCCGTCTGATTGCGGCATGTCTGCTGCTCCGGGTCCGCCTGATTGCAGCATGGCTGCTGATCCGGGTCCGTCTGATTGCAGCATGGCTGCTGATCTGGGACCGTCTGATTGCG
>TCONS_00036301
GTTTGATTTGGTGTTCAGTGGTGTAGATGGTGTTTGACAGTCAGCGAACAGTCATGCGTTTTCAGTCAAAAATACAGCGTTTACAGCACGATATTGATTACAATATTCTGGAGAGAATGATTACACGAGATTCACCAGAGTTCAGGAGCCGCGGTCGCGCTGGAGGAGCGTCCGAACAGAGAGCTTCATCTGCGGCCGTCGTGGAGAACCAGACAGCAGaGATGCAAAGACGAGGACGGAGGAAGACGGGCGTTCTTTCATTCTTCCGGAAAATGGGAAAAGCTATCCATAAGCTTTGCTGTATGGATGCAGCAGCAACATCTATAGTGGACCACACTGACCCATCTGGTAGCGCTCGTGCTGTCGAATCGAGAGAACGGACTAGAAAGATCTACCTCAAGAAAGATTGCAGCAAAGTCATCTTGAGAATCGTCAAGGGCACCCCAGGGTCCCCGGATCCGTGTGGGGTCTGTGTTGTCTCCATTGACGTGGACCAACCTGGGATCTCCAGTGTGTCTGTTGACCCGGGACCTAATGGATTCTACTCGGATTCTTTTAGTCCGGGTCCACCTGGAGTCCTCCGCTTGTCCCTCGTCCTATGTCCATCTGGGGTGTTCAGTGTGTCTCTTAATGCTCGTCCATCTCGAGGCTGCAGGGTGTCTGTTGATCCCGGTTCGTCTGGGTTCTTCAGTGTGTCCTCTTATCCGGGTGCGTCTCGGGACTTCAGTGTATCTGGTAACCCGGATGCCTCTGGAGGCTGCAGGCTGTCTGTGGATAGGGGTCTGTTTGGGGGCTGCGCAGTGTCTGCTGCTCCGGGTCCGTCTGATTGCAGCATGTCAGCTGCTCCGGGTCCGTCTGATTGCGGCATGTCTGCTGCTCCGGGTCCGCCTGATTGCAGCATGGCTGCTGATCCGGGTCCGTCTGATTGCAGCATGGCTGCTGATCTGGGACCGTCTGATTGCG

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-041014-227 No description available

Ensembl:

ensembl_id ENSDARG00000110807

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036302 False 969 mRNA 0.54 3 52628875 52631998
TCONS_00036301 True 963 mRNA 0.54 3 52628875 52631998

Neighbor

gene id symbol gene type direction distance location
XLOC_018483 si:ch211-221n20.7 coding downstream 12542 52613021 ~ 52616333 (-)
XLOC_018482 si:dkey-235d18.6 coding downstream 25781 52599959 ~ 52603094 (-)
XLOC_018481 NA coding downstream 84121 52541466 ~ 52544754 (-)
XLOC_018480 si:ch1073-287p18.1 coding downstream 290065 52332972 ~ 52338810 (-)
XLOC_018479 naprt coding downstream 314576 52273446 ~ 52314299 (-)
XLOC_018485 si:ch211-221n20.2 coding upstream 7379 52639377 ~ 52642504 (-)
XLOC_018486 NA coding upstream 21502 52653500 ~ 52654969 (-)
XLOC_018487 si:ch211-221n20.4 coding upstream 31033 52663031 ~ 52666150 (-)
XLOC_018488 NA coding upstream 41110 52673108 ~ 52676467 (-)
XLOC_018489 BX005301.1 coding upstream 54231 52686229 ~ 52691004 (-)
XLOC_017928 CU539064.1 misc downstream 42575174 10053405 ~ 10053701 (-)
XLOC_018476 CU905509.1 non-coding downstream 484570 52144191 ~ 52144305 (-)
XLOC_018474 NA non-coding downstream 714602 51910775 ~ 51914273 (-)
XLOC_018472 BX936461.1 non-coding downstream 879707 51748497 ~ 51749168 (-)
XLOC_018467 NA non-coding downstream 986527 51619897 ~ 51642348 (-)
XLOC_018491 NA non-coding upstream 186809 52818807 ~ 52819616 (-)
XLOC_018493 CABZ01076171.1 non-coding upstream 195012 52827010 ~ 52827126 (-)

Expression


Co-expression Network