RNA id: TCONS_00036301


Basic Information

Item Value
RNA id TCONS_00036301
length 963
RNA type mRNA
GC content 0.54
exon number 3
gene id XLOC_018484
representative True

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 52628875 ~ 52631998 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GTTTGATTTGGTGTTCAGTGGTGTAGATGGTGTTTGACAGTCAGCGAACAGTCATGCGTTTTCAGTCAAAAATACAGCGTTTACAGCACGATATTGATTACAATATTCTGGAGAGAATGATTACACGAGATTCACCAGAGTTCAGGAGCCGCGGTCGCGCTGGAGGAGCGTCCGAACAGAGAGCTTCATCTGCGGCCGTCGTGGAGAACCAGACAGCAGaGATGCAAAGACGAGGACGGAGGAAGACGGGCGTTCTTTCATTCTTCCGGAAAATGGGAAAAGCTATCCATAAGCTTTGCTGTATGGATGCAGCAGCAACATCTATAGTGGACCACACTGACCCATCTGGTAGCGCTCGTGCTGTCGAATCGAGAGAACGGACTAGAAAGATCTACCTCAAGAAAGATTGCAGCAAAGTCATCTTGAGAATCGTCAAGGGCACCCCAGGGTCCCCGGATCCGTGTGGGGTCTGTGTTGTCTCCATTGACGTGGACCAACCTGGGATCTCCAGTGTGTCTGTTGACCCGGGACCTAATGGATTCTACTCGGATTCTTTTAGTCCGGGTCCACCTGGAGTCCTCCGCTTGTCCCTCGTCCTATGTCCATCTGGGGTGTTCAGTGTGTCTCTTAATGCTCGTCCATCTCGAGGCTGCAGGGTGTCTGTTGATCCCGGTTCGTCTGGGTTCTTCAGTGTGTCCTCTTATCCGGGTGCGTCTCGGGACTTCAGTGTATCTGGTAACCCGGATGCCTCTGGAGGCTGCAGGCTGTCTGTGGATAGGGGTCTGTTTGGGGGCTGCGCAGTGTCTGCTGCTCCGGGTCCGTCTGATTGCAGCATGTCAGCTGCTCCGGGTCCGTCTGATTGCGGCATGTCTGCTGCTCCGGGTCCGCCTGATTGCAGCATGGCTGCTGATCCGGGTCCGTCTGATTGCAGCATGGCTGCTGATCTGGGACCGTCTGATTGCG

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-041014-227 No description available

Ensembl:

ensembl_id ENSDART00000139072

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00037009 lncRNA downstream 84121 52541466 ~ 52544754 (-) True XLOC_018481
TCONS_00037008 lncRNA downstream 84144 52541466 ~ 52544731 (-) False XLOC_018481
TCONS_00037007 lncRNA downstream 84201 52541466 ~ 52544674 (-) False XLOC_018481
TCONS_00037006 lncRNA downstream 84202 52541466 ~ 52544673 (-) False XLOC_018481
TCONS_00037005 lncRNA downstream 84207 52541466 ~ 52544668 (-) False XLOC_018481
TCONS_00037010 lncRNA upstream 21502 52653500 ~ 52654969 (-) True XLOC_018486
TCONS_00036517 lncRNA upstream 41110 52673108 ~ 52676467 (-) False XLOC_018488
TCONS_00036518 lncRNA upstream 42007 52674005 ~ 52676422 (-) False XLOC_018488
TCONS_00036519 lncRNA upstream 42087 52674085 ~ 52676410 (-) False XLOC_018488
TCONS_00036520 lncRNA upstream 42197 52674195 ~ 52676410 (-) True XLOC_018488
TCONS_00036300 mRNA downstream 12542 52613021 ~ 52616333 (-) False XLOC_018483
TCONS_00036299 mRNA downstream 12542 52613021 ~ 52616333 (-) True XLOC_018483
TCONS_00036298 mRNA downstream 25781 52599959 ~ 52603094 (-) False XLOC_018482
TCONS_00036297 mRNA downstream 25781 52599959 ~ 52603094 (-) True XLOC_018482
TCONS_00036296 mRNA downstream 290093 52332979 ~ 52338782 (-) True XLOC_018480
TCONS_00036304 mRNA upstream 7379 52639377 ~ 52642504 (-) False XLOC_018485
TCONS_00036303 mRNA upstream 7379 52639377 ~ 52642504 (-) True XLOC_018485
TCONS_00036306 mRNA upstream 31033 52663031 ~ 52666150 (-) False XLOC_018487
TCONS_00036305 mRNA upstream 31033 52663031 ~ 52666150 (-) True XLOC_018487
TCONS_00036310 mRNA upstream 70014 52702012 ~ 52705325 (-) False XLOC_018490
TCONS_00036289 other downstream 484570 52144191 ~ 52144305 (-) True XLOC_018476
TCONS_00036283 other downstream 879707 51748497 ~ 51749168 (-) True XLOC_018472
TCONS_00036281 other downstream 901046 51700633 ~ 51727829 (-) False XLOC_018471
TCONS_00036263 other downstream 1442310 51178311 ~ 51186565 (-) True XLOC_018458
TCONS_00036258 other downstream 2267700 50361059 ~ 50361175 (-) True XLOC_018455
TCONS_00036308 other upstream 54231 52686229 ~ 52691004 (-) False XLOC_018489
TCONS_00036307 other upstream 54231 52686229 ~ 52691004 (-) True XLOC_018489
TCONS_00036312 other upstream 195012 52827010 ~ 52827126 (-) True XLOC_018493
TCONS_00036326 other upstream 776286 53408284 ~ 53435476 (-) False XLOC_018503
TCONS_00036327 other upstream 776581 53408579 ~ 53435393 (-) False XLOC_018503

Expression Profile

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