RNA id: TCONS_00036297


Basic Information

Item Value
RNA id TCONS_00036297
length 963
RNA type mRNA
GC content 0.54
exon number 3
gene id XLOC_018482
representative True

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 52599959 ~ 52603094 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GTTTGATTTGGTGTTCAGTGGTGTAGATGCTTTTTGACAGTCAGCGAACAGTCATGCGTTTTCAGTCAAAAATACAGCGTTTACAGCACGATATGGATTACAATATACTGGAGAGAATGATTACACGAGATTCACCAGAGTTCAGGAGCCGCGGTCGCGCTGGAGGAGCGTCCGAACAGAGAGCTTCATCTGCGGCCGTCGTGGAGAACCAGACAGCAGagATGCAAAGACGAGGACGGAGGAAGACAGGCGTTCTTTCATTCTTCCGGAAAATGGGAAGAGCTATCCATAAGCTTTGCTGTATGGATGCAGCAGCAACATCTATAGTGGACCACACTGACCCATCTGGTAGCGCTCGTGCTGTCGAATCGAGAGAACGGACTAGAAAGATCTACCTCAAGAAAGATTGCAGCAAAGTCATCTTGAGAATCGTCAAGGGCACCCCAGGGTCCCCGGATCCGTGTGGGGTCTGTGTTGTCTCCATTGACGTGGACCAACCTGGGATCTCCAGTGTGTCTGTTGACCCGGGACCTAATGGATTCTACTCGGATTCTTTTAGTCCGGGTCCACCTGGAGTCCTCCGCTTGTCCCTCGTCCTATGTCCATCTGGGGTGTTCAGTGTGTCTCTTAATGCTCGTCCATCTCGAGGCTGCAGGGTGTCTGTTGATCCCGGTTCGTCTGGGTTCTTCAGTGTGTCCTCTTATCCGGGTGCGTCTCGGGACTTCAGTGTATCTGGTAACCCGGATGCCTCTGGAGGCTGCAGGCTGTCTGTGGATACGGGTCTGTTTGGGGGCTGCGCAGTGTCTGCTGCTCCGGGTCCGTCTGATTGCGGCATGTCTGCTGCTCCGGGTCCGTCTGATTGCGGCATGTCAGCTGCTCCGGGTCCGTCTGATTGCAGCATGGCTGCTGATCCGGGTTCGTCTGATTGCAGCATGGCTGCTGATCCGGGTCCGTCTGATTGCG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000133798

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00037009 lncRNA downstream 55205 52541466 ~ 52544754 (-) True XLOC_018481
TCONS_00037008 lncRNA downstream 55228 52541466 ~ 52544731 (-) False XLOC_018481
TCONS_00037007 lncRNA downstream 55285 52541466 ~ 52544674 (-) False XLOC_018481
TCONS_00037006 lncRNA downstream 55286 52541466 ~ 52544673 (-) False XLOC_018481
TCONS_00037005 lncRNA downstream 55291 52541466 ~ 52544668 (-) False XLOC_018481
TCONS_00037010 lncRNA upstream 50406 52653500 ~ 52654969 (-) True XLOC_018486
TCONS_00036517 lncRNA upstream 70014 52673108 ~ 52676467 (-) False XLOC_018488
TCONS_00036518 lncRNA upstream 70911 52674005 ~ 52676422 (-) False XLOC_018488
TCONS_00036519 lncRNA upstream 70991 52674085 ~ 52676410 (-) False XLOC_018488
TCONS_00036520 lncRNA upstream 71101 52674195 ~ 52676410 (-) True XLOC_018488
TCONS_00036295 mRNA downstream 261149 52332972 ~ 52338810 (-) False XLOC_018480
TCONS_00036296 mRNA downstream 261177 52332979 ~ 52338782 (-) True XLOC_018480
TCONS_00036294 mRNA downstream 285660 52273446 ~ 52314299 (-) True XLOC_018479
TCONS_00036292 mRNA downstream 328697 52233981 ~ 52271262 (-) False XLOC_018478
TCONS_00036293 mRNA downstream 328944 52234000 ~ 52271015 (-) True XLOC_018478
TCONS_00036300 mRNA upstream 9927 52613021 ~ 52616333 (-) False XLOC_018483
TCONS_00036299 mRNA upstream 9927 52613021 ~ 52616333 (-) True XLOC_018483
TCONS_00036302 mRNA upstream 25781 52628875 ~ 52631998 (-) False XLOC_018484
TCONS_00036301 mRNA upstream 25781 52628875 ~ 52631998 (-) True XLOC_018484
TCONS_00036304 mRNA upstream 36283 52639377 ~ 52642504 (-) False XLOC_018485
TCONS_00036289 other downstream 455654 52144191 ~ 52144305 (-) True XLOC_018476
TCONS_00036283 other downstream 850791 51748497 ~ 51749168 (-) True XLOC_018472
TCONS_00036281 other downstream 872130 51700633 ~ 51727829 (-) False XLOC_018471
TCONS_00036263 other downstream 1413394 51178311 ~ 51186565 (-) True XLOC_018458
TCONS_00036258 other downstream 2238784 50361059 ~ 50361175 (-) True XLOC_018455
TCONS_00036308 other upstream 83135 52686229 ~ 52691004 (-) False XLOC_018489
TCONS_00036307 other upstream 83135 52686229 ~ 52691004 (-) True XLOC_018489
TCONS_00036312 other upstream 223916 52827010 ~ 52827126 (-) True XLOC_018493
TCONS_00036326 other upstream 805190 53408284 ~ 53435476 (-) False XLOC_018503
TCONS_00036327 other upstream 805485 53408579 ~ 53435393 (-) False XLOC_018503

Expression Profile

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