XLOC_018517 (faua)


Basic Information

Item Value
gene id XLOC_018517
gene name faua
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 54201459 ~ 54208344 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036345
aGTGCTCATCATGCAGCTGTTTCTGCGCGCTCAGTCTCTTCACACACTCGAGGTCTCCGGAAATGAGACCGTCCGTGACATTAAGgcccATGTGGAGGCTCTGGAGGGAGTGTGTGTGGAGGATCAGCTCCTCCTGCTGTCTGGAGCTCCTCTGCAGGACGACTCCACGCTGCTGAACTGCGGCATCACTGAGTTCTGCACACTCGAGGTGTCTGGCAGACTGCTGGGAggtaaaGTCCACGGCTCTCTGGCTCGCGCTGGTAAAGTAAGAGGACAGACGCCTAAGGTGGACAAacaggagaagaagaagaagaagaccgGCCGTGCCAAACGCCGCATTCAGTACAACCGGCGCTTCGTCAACGTGGTGCCGACCTTCGGCAAGAAGAAGGGGCCGAACGCAAACTCCtaaaccaatgatttactctgaGATCTGAACACTCTCGTAAAATAAAGGTTCTTCAGGAGCTC

Function

symbol description
faua Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of cytosolic small ribosomal subunit. Orthologous to human FAU (FAU ubiquitin like and ribosomal protein S30 fusion).

GO:

id name namespace
GO:0006412 translation biological_process
GO:0022627 cytosolic small ribosomal subunit cellular_component
GO:0005840 ribosome cellular_component
GO:0003735 structural constituent of ribosome molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-1700 Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of cytosolic small ribosomal subunit. Orthologous to human FAU (FAU ubiquitin like and ribosomal protein S30 fusion).

Ensembl:

ensembl_id ENSDARG00000099022

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036345 True 471 mRNA 0.55 4 54201459 54208344

Neighbor

gene id symbol gene type direction distance location
XLOC_018516 arf6a coding downstream 3329 54196543 ~ 54198130 (-)
XLOC_018515 CABZ01111496.1 coding downstream 9329 54174978 ~ 54192130 (-)
XLOC_018514 NA coding downstream 28160 54164885 ~ 54173299 (-)
XLOC_018513 NA coding downstream 47256 54149197 ~ 54154203 (-)
XLOC_018512 mgat2 coding downstream 126323 54067041 ~ 54075136 (-)
XLOC_018518 prpf39 coding upstream 5344 54213688 ~ 54245256 (-)
XLOC_018519 fkbp3 coding upstream 40995 54249339 ~ 54259780 (-)
XLOC_018520 NA coding upstream 62547 54270891 ~ 54271455 (-)
XLOC_018521 NA coding upstream 131367 54339711 ~ 54345412 (-)
XLOC_018522 entpd5b coding upstream 151924 54360268 ~ 54381034 (-)
XLOC_017928 CU539064.1 misc downstream 44147758 10053405 ~ 10053701 (-)
XLOC_018511 NA non-coding downstream 149965 54050432 ~ 54051494 (-)
XLOC_018510 NA non-coding downstream 154726 54046178 ~ 54046733 (-)
XLOC_018505 NA non-coding downstream 390790 53804362 ~ 53810669 (-)
XLOC_018525 NA non-coding upstream 275421 54483765 ~ 54488224 (-)
XLOC_018529 NA non-coding upstream 378295 54586639 ~ 54610803 (-)
XLOC_018530 NA non-coding upstream 554177 54762521 ~ 54772668 (-)

Expression


Co-expression Network