XLOC_018530


Basic Information

Item Value
gene id XLOC_018530
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 54762521 ~ 54772668 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00037026
tgtgagagtgtatgtgtgtgtgtgtgtgtgtatgtgtgttgatgTGAGGAGAATCACAGTGATCTGGCTCTTAGCTCTCCGGCTAGCAGCTAGCGCTGTGTCCCGCGGAAGGTCTGCTGTTCTCCGTCATGCTGCCGATGGAGATATggatataaatatggatatggaTGGAGCGGTGTCCTCATCTGCTTGTCCTGAACAGGTTCTCCGTCATGCATGTTCTGTGCGCATCAGGATTCCTGGACGACACACTCTCAGCTAAAAATAGTGTAGCACAGTGCAGAGTGAAGCTGAAGCTGTTTCTATTACTGCTGTTTCTAATTGAGGCTCGGCCGCTGCTGGGAGATGCGCATGCGGACGCAATTTACACTCCAATTACACTGACGACCTCTGTGCTATAACTCTGAACGCTATTATCACACATGTGTGATGACGAGGGAGATGTGTCcagatgcg

Function

GO:

id name namespace
GO:0004629 phospholipase C activity molecular_function
GO:0042578 phosphoric ester hydrolase activity molecular_function
GO:0004435 phosphatidylinositol phospholipase C activity molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00037026 True 456 lncRNA 0.50 2 54762521 54772668

Neighbor

gene id symbol gene type direction distance location
XLOC_018529 NA coding downstream 151718 54586639 ~ 54610803 (-)
XLOC_018528 zgc:153012 coding downstream 198503 54525404 ~ 54564018 (-)
XLOC_018527 ppp1r35 coding downstream 239861 54512067 ~ 54522660 (-)
XLOC_018526 CABZ01118770.1 coding downstream 253871 54506428 ~ 54508650 (-)
XLOC_018525 NA coding downstream 274297 54483765 ~ 54488224 (-)
XLOC_018531 CABZ01037174.1 coding upstream 56430 54829098 ~ 54869006 (-)
XLOC_018532 si:dkey-15f23.1 coding upstream 101453 54874121 ~ 54924593 (-)
XLOC_018533 NA coding upstream 115789 54888457 ~ 54891115 (-)
XLOC_018534 CR376838.1 coding upstream 220689 54993357 ~ 54998597 (-)
XLOC_018535 NA coding upstream 274848 55047516 ~ 55049037 (-)
XLOC_017928 CU539064.1 misc downstream 44708820 10053405 ~ 10053701 (-)
XLOC_018521 NA non-coding downstream 417109 54339711 ~ 54345412 (-)
XLOC_018520 NA non-coding downstream 491066 54270891 ~ 54271455 (-)
XLOC_018514 NA non-coding downstream 589222 54164885 ~ 54173299 (-)
XLOC_018536 CT027638.1 non-coding upstream 396332 55169000 ~ 55169889 (-)

Expression


Co-expression Network