XLOC_018519 (fkbp3)


Basic Information

Item Value
gene id XLOC_018519
gene name fkbp3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 54249339 ~ 54259780 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036347
ATGGCGGCGGCTCCAGAGCGGCAGTGGAGCGACGAGCAGCTAAAAAGTGAAGAAGTGCCGAAAAAAGAGCTCATTAAGTTCATCCAGGACAGCGCAGCACACTCGTTTCTGGCGGAACACAAACTCCTGGGAAACATCAAGAATGTGTCGAAAACAGCCAAGAAAGAGCAGCTGATCGAGGCCTACAACCAGCTGTTCCAgagccagCGTTGGAAACCTCCACtgtacaaAAGTCCTACCGAGcaagttttattaataggaattgaatcTGCTCCTACAAACATAGACACTTCTTGTGTCtatgaagacccaccttggaaacacactttaaatattttagggtcgaaatcaaacaaatcagactttctccagaagagacatactgtgaacatttgggcggggctttccctctctgatgacatcatacacaaggagaatgtcaatcaaaCTGCAAAAAAGAAGAAGCAGTCGAAACCGCTGAGCTTTAAGGTTGGGATGGGAAAAGTCATCAGAGGAtgggaTGAGGGTCTGCTGACGATGAGTAAAGGCGAAACGGCGCGGCTGGAGATCGAGTCTGAATGGGCGTATGGGAAAAAAGGTCTTCCTGACGCCAAAATTCCTCCCAACGCCAAGCTGATCTTCGAGGTGGAGCTGGTGGCCGTCGATTGA

Function

symbol description
fkbp3 Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Is expressed in alar plate midbrain region; immature eye; nervous system; pectoral fin musculature; and pharyngeal arch 3-7 skeleton. Orthologous to human FKBP3 (FKBP prolyl isomerase 3).

GO:

id name namespace
GO:0016853 isomerase activity molecular_function
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG:

id description
ko03110 Chaperones and folding catalysts

ZFIN:

id description
ZDB-GENE-030616-419 Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Is expressed in alar plate midbrain region; immature eye; nervous system; pectoral fin musculature; and pharyngeal arch 3-7 skeleton. Orthologous to human FKBP3 (FKBP prolyl isomerase 3).

Ensembl:

ensembl_id ENSDARG00000098059

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036347 True 669 mRNA 0.48 15 54249339 54259780

Neighbor

gene id symbol gene type direction distance location
XLOC_018518 prpf39 coding downstream 4083 54213688 ~ 54245256 (-)
XLOC_018517 faua coding downstream 40995 54201459 ~ 54208344 (-)
XLOC_018516 arf6a coding downstream 51209 54196543 ~ 54198130 (-)
XLOC_018515 CABZ01111496.1 coding downstream 57209 54174978 ~ 54192130 (-)
XLOC_018514 NA coding downstream 76040 54164885 ~ 54173299 (-)
XLOC_018520 NA coding upstream 11111 54270891 ~ 54271455 (-)
XLOC_018521 NA coding upstream 79931 54339711 ~ 54345412 (-)
XLOC_018522 entpd5b coding upstream 100488 54360268 ~ 54381034 (-)
XLOC_018523 yy1b coding upstream 159812 54419592 ~ 54435287 (-)
XLOC_018524 evlb coding upstream 177273 54437053 ~ 54462551 (-)
XLOC_017928 CU539064.1 misc downstream 44195638 10053405 ~ 10053701 (-)
XLOC_018513 NA non-coding downstream 95136 54149197 ~ 54154203 (-)
XLOC_018511 NA non-coding downstream 197845 54050432 ~ 54051494 (-)
XLOC_018510 NA non-coding downstream 202606 54046178 ~ 54046733 (-)
XLOC_018505 NA non-coding downstream 438670 53804362 ~ 53810669 (-)
XLOC_018525 NA non-coding upstream 223985 54483765 ~ 54488224 (-)
XLOC_018529 NA non-coding upstream 326859 54586639 ~ 54610803 (-)
XLOC_018530 NA non-coding upstream 502741 54762521 ~ 54772668 (-)

Expression


Co-expression Network