XLOC_001885 (ddx4)


Basic Information

Item Value
gene id XLOC_001885
gene name ddx4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 6884123 ~ 6905574 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003722
CATAGCTGGCCATCTTTCTTTCTCTCGCGAGGCTCTTCACGCGTGTCCACCTGCTACCGGCTCTTCTGAAAAAAAGTCTCACCTAAAATTACCCAATATGGATGACTGGGAGGAAGATCAGAGTCCCGTTGTGTCTTGCAGCTCAGGATTTGgaGGTGCTGGAAATGACAAGTCAAACAGTGAAGGTACTGAAGGTAGCTCATGGAAAATGACTGGTGATTCGTTCAGGGGGAGAGGAGGCAGGGGAGGATCACGAGGAGGCAGAGGAGGCTTTAGCGGTTTTAAATCAGAAATTGATGAGAATGGCAGCGATGGAGGTTGGAACGGAGGTGAAAGTCGAGGAAAAGGACGTGGTGGTTTCCGTGGTGGTTTTCGCAGTGGCTCCCGTGATGaaaatGATGAAAATGGAAATGATGATGGTTGGAAAGGAGGTGAAAGCCGAGGTAGAGGTCGAGGTGGTTTCGGGGGTGGTTTTCGTGGAGGTTTCCGTGATGGTGGTAATGAAGACACTGGGAGAAGAGGCTTTGGAAGAGAAAATAATGAAAATGGAAACGATGAggGAGAAGGCAGAGGAAGAGGTCGTGGTGGTTTCCGGGGTGGTTTTCGTGATGGTGGTGGTGATGAGAGTGGAAAAAGAGGCTTCGGAAGAGGAGGTTTTAGAGGCCGGAATGAGGAAGTATTTTCCAAGGTCACAACTGCAGACAAGTTGGATCAAGAAGGAAGTGAAAATGCAGgaccCAAGGTTGTTTATGTGCCGCCGCCTCCTCCAGAGGAGGAGAGCTCGATATTCTCCCATTATGCAACAGGCATTAATTTTGACAAATATGATGATATTCTTGTGGACGTGAGTGGCAGCAATCCTCCAAAAGCAATTATGacTTTTGAGGAAGCAGGACTTTGTGACTCACTGAGCAAAAATGTATCAAAGTCTGGATATGTGAAGCCTACACCTGTTCAGAAACATGGCATTCCCATCATTTCAGCTGGACGGGATCTAATGGCTTGTGCTCAGACTGGATCAGGAAAAACGGCGGCCTTCCTGCTGCCTATCCTACAGCGCTTTATGACTGATGGTGTGGCAGCCAGCAAGTTCAGTGAGATACAGGAGCCTGAGGCCATAATCGTGGCTCCCACCAGAGAACTTATCAATCAGATCTATCTGGAGGCCAGGAAGTTTGCATACGGGACCTGTGTACGACCTGTTGTGGTTTATGGAGGTATAAATACTGGATATACTATCCGAGAGGTGTTAAAGGGCTGCAATGTTCTGTGTGCTACTCCTGGAAGATTGCATGACCTCATTGGTCGTGGAAAGATTGGCCTGAGTAAAGTGCGCTATCTAGTTCTGGATGAAGCAGACAGAATGCTGGACATGGGCTTTGAGCCAGAAATGCGCAAACTGGTGGCGTCTCCTGGTATGCCTTCAAAAGAGGAACGACAAACCCTCATGTTCAGTGCCACCTACCCTGAAGATATTCAAAGAATGGCTGCTGACTTTCTTAAAGTGGACTATATTTTCCTTGCTGTTGGTGTGGTGGGTGGAGCATGCAGTGATGTGGAGCAAACCATTGTTCAGGTGGACCAGTACTCAAAGAGGGACCAGCTGCTTGAATTGCTCAGAGCAACAGGTAATGAGCGCACAATGGTTTTTGTGGAAACCAAAAGAAGTGCTGATTTCATAGCAACATTTCTCTGTCAAGAGAAGATCTCAACCACAAGCATCCAtggTGATCGGGAACAGCGAGAGCGAGAGAAAGCTCTCAGTGATTTTCGCCTTGGCCAGTGTCCAGTTCTGGTCGCCACATCTGTAGCTGCTAGAGGCCTGGATATTGAGCAAGTCCAGCATGTTGTGAATTTTGACATGCCCAGCAGCATCGATGAGTATGTCCATCGCATAGGAAGAACTGGACGCTGTGGGAACACCGGTCGCGCCGTGTCCTTTTTTAACCCAGAGTCTGACACTCCATTAGCTCGCTCCCTGGTCAAAGTCCTTTCAGGGGCCCAACAAGTAGTTCCAAAATGGCTGGAGGAAGTTGCCTTCAGTGCTCATGGGACAACAGGCTTCAACCCACGTGGGAAGGTGTTTGCATCTACAGACTCGCGGAAGGGAGGATCCTTCAAGAGCGATGAGCCGCCACCATCACAAACATCTGCCCCGAGCGCAGCAGCTGCTGCAGACGATGAGGAATGGGAATAACTGGCCTCACAcctgttatatttattttatttttattttatttgtgcgaGCTTCTTCAATACCATTTCAGGATATTTGTTAATGTTGAATGACTAAAGTAGCATTAGGATAAAGCTGTTGTATTTAGAGTCACATTGAATGCTGTAGGTTTGACCTCAAGGACGATAATCAAGACTAATACCTTTTGGCAGTTTAATTTGATCATCTTTTTGGTATCACTCGTTTTGACTGGAGCACATCTGAAATAGTGGATTTGTTTTACTAGAGCACAAGTGCAGAAGTGGGTGGGTTTGTTTAATCACATTTTAACACTTTGCTAGGA
>TCONS_00003723
TTTCTTTCTCTCGCGAGGCTCTTCACGCGTGTCCACCTGCTACCGGCTCTTCTGAAAAAAAGTCTCACCTAAAATTACCCAATATGGATGACTGGGAGGAAGATCAGAGTCCCGTTGTGTCTTGCAGCTCAGGATTTGgaGGTGCTGGAAATGACAAGTCAAACAGTGAAGGTACTGAAGGTAGCTCATGGAAAATGACTGGTGATTCGTTCAGGGGGAGAGGAGGCAGGGGAGGATCACGAGGAGGCAGAGGAGGCTTTAGCGGTTTTAAATCAGAAATTGATGAGAATGGCAGCGATGGAGGTTGGAACGGAGGTGAAAGTCGAGGAAAAGGACGTGGTGGTTTCCGTGGTGGTTTTCGCAGTGGCTCCCGTGATGaaaatGATGAAAATGGAAATGATGATGGTTGGAAAGGAGGTGAAAGCCGAGGTAGAGGTCGAGGTGGTTTCGGGGGTGGTTTTCGTGGAGGTTTCCGTGATGGTGGTAATGAAGACACTGGGAGAAGAGGCTTTGGAAGAGAAAATAATGAAAATGGAAACGATGAggGAGAAGGCAGAGGAAGAGGTCGTGGTGGTTTCCGGGGTGGTTTTCGTGATGGTGGTGGTGATGAGAGTGGAAAAAGAGGCTTCGGAAGAGGAGTCACAACTGCAGACAAGTTGGATCAAGAAGGAAGTGAAAATGCAGgaccCAAGGTTGTTTATGTGCCGCCGCCTCCTCCAGAGGAGGAGAGCTCGATATTCTCCCATTATGCAACAGGCATTAATTTTGACAAATATGATGATATTCTTGTGGACGTGAGTGGCAGCAATCCTCCAAAAGCAATTATGacTTTTGAGGAAGCAGGACTTTGTGACTCACTGAGCAAAAATGTATCAAAGTCTGGATATGTGAAGCCTACACCTGTTCAGAAACATGGCATTCCCATCATTTCAGCTGGACGGGATCTAATGGCTTGTGCTCAGACTGGATCAGGAAAAACGGCGGCCTTCCTGCTGCCTATCCTACAGCGCTTTATGACTGATGGTGTGGCAGCCAGCAAGTTCAGTGAGATACAGGAGCCTGAGGCCATAATCGTGGCTCCCACCAGAGAACTTATCAATCAGATCTATCTGGAGGCCAGGAAGTTTGCATACGGGACCTGTGTACGACCTGTTGTGGTTTATGGAGGTATAAATACTGGATATACTATCCGAGAGGTGTTAAAGGGCTGCAATGTTCTGTGTGCTACTCCTGGAAGATTGCATGACCTCATTGGTCGTGGAAAGATTGGCCTGAGTAAAGTGCGCTATCTAGTTCTGGATGAAGCAGACAGAATGCTGGACATGGGCTTTGAGCCAGAAATGCGCAAACTGGTGGCGTCTCCTGGTATGCCTTCAAAAGAGGAACGACAAACCCTCATGTTCAGTGCCACCTACCCTGAAGATATTCAAAGAATGGCTGCTGACTTTCTTAAAGTGGACTATATTTTCCTTGCTGTTGGTGTGGTGGGTGGAGCATGCAGTGATGTGGAGCAAACCATTGTTCAGGTGGACCAGTACTCAAAGAGGGACCAGCTGCTTGAATTGCTCAGAGCAACAGGTAATGAGCGCACAATGGTTTTTGTGGAAACCAAAAGAAGTGCTGATTTCATAGCAACATTTCTCTGTCAAGAGAAGATCTCAACCACAAGCATCCAtggTGATCGGGAACAGCGAGAGCGAGAGAAAGCTCTCAGTGATTTTCGCCTTGGCCAGTGTCCAGTTCTGGTCGCCACATCTGTAGCTGCTAGAGGCCTGGATATTGAGCAAGTCCAGCATGTTGTGAATTTTGACATGCCCAGCAGCATCGATGAGTATGTCCATCGCATAGGAAGAACTGGACGCTGTGGGAACACCGGTCGCGCCGTGTCCTTTTTTAACCCAGAGTCTGACACTCCATTAGCTCGCTCCCTGGTCAAAGTCCTTTCAGGGGCCCAACAAGTAGTTCCAAAATGGCTGGAGGAAGTTGCCTTCAGTGCTCATGGGACAACAGGCTTCAACCCACGTGGGAAGGTGTTTGCATCTACAGACTCGCGGAAGGGAGGATCCTTCAAGAGCGATGAGCCGCCACCATCACAAACATCTGCCCCGAGCGCAGCAGCTGCTGCAGACGATGAGGAATGGGAATAACTGGCCTCACAcctgttatatttattttatttttattttatttgtgcgaGCTTCTTCAATACCATTTCAGGATATTTGTTAATGTTGAATGACTAAAGTAGCATTAGGATAAAGCTGTTGTATTTAGAGTCACATTGAATGCTGTAGGTTTGACCTCAAGGACGATAATCAAGACTAATACCTTTTGGCAGTTTAATTTGATCATCTTTTTGGTATCACTCGTTTTGACTGGAGCACATCTGAAATAGTGGATTTGTTTTACTAGAGCACAAGTGCAGAAGTGGGTGGGTTTGTTTAATCACATTTTAACACTTTGCTAGGAGTGTATTGAGTTTTGTAAGCTTTGACCTAAAGGTGTTTCCTACAGTTAAATCTATTAATCAGTTCTATTGTTGATTGTGACTGTTTGTAGGTTATTTTTCTTGACATTTCCGTCTTGAAGCCAGAGTATAGAACAAGAAACTTGTTTTGCAGATGTACCTTGCCAGATAAAGGTAGCtaaagtcattgtttaacagacATCTCtttaattttaaagtcaaaatgttgATAAAATTCAGTCAAGAGGCAGTGACTGACTGTAACAGAGCGGTGCTTCCTCACTAGCTGAAGTGGCTCAAAATAAAGACGGATACTGGTG
>TCONS_00003724
AGGCTCTTCACGCGTGTCCACCTGCTACCGGCTCTTCTGAAAAAAAGTCTCACCTAAAATTACCCAATATGGATGACTGGGAGGAAGATCAGAGTCCCGTTGTGTCTTGCAGCTCAGGATTTGGTCTAGGCTCAAATGGTTCTGATGGAGGATTCAAGAGCTTTTATACAGgaGGTGCTGGAAATGACAAGTCAAACAGTGAAGGTACTGAAGGTAGCTCATGGAAAATGACTGGTGATTCGTTCAGGGGGAGAGGAGGCAGGGGAGGATCACGAGGAGGCAGAGGAGGCTTTAGCGGTTTTAAATCAGAAATTGATGAGAATGGCAGCGATGGAGGTTGGAACGGAGGTGAAAGTCGAGGAAAAGGACGTGGTGGTTTCCGTGGTGGTTTTCGCAGTGGCTCCCGTGATGaaaatGATGAAAATGGAAATGATGATGGTTGGAAAGGAGGTGAAAGCCGAGGTAGAGGTCGAGGTGGTTTCGGGGGTGGTTTTCGTGGAGGTTTCCGTGATGGTGGTAATGAAGACACTGGGAGAAGAGGCTTTGGAAGAGAAAATAATGAAAATGGAAACGATGAggGAGAAGGCAGAGGAAGAGGTCGTGGTGGTTTCCGGGGTGGTTTTCGTGATGGTGGTGGTGATGAGAGTGGAAAAAGAGGCTTCGGAAGAGGAGGTTTTAGAGGCCGGAATGAGGAAGTATTTTCCAAGGTCACAACTGCAGACAAGTTGGATCAAGAAGGAAGTGAAAATGCAGgaccCAAGGTTGTTTATGTGCCGCCGCCTCCTCCAGAGGAGGAGAGCTCGATATTCTCCCATTATGCAACAGGCATTAATTTTGACAAATATGATGATATTCTTGTGGACGTGAGTGGCAGCAATCCTCCAAAAGCAATTATGacTTTTGAGGAAGCAGGACTTTGTGACTCACTGAGCAAAAATGTATCAAAGTCTGGATATGTGAAGCCTACACCTGTTCAGAAACATGGCATTCCCATCATTTCAGCTGGACGGGATCTAATGGCTTGTGCTCAGACTGGATCAGGAAAAACGGCGGCCTTCCTGCTGCCTATCCTACAGCGCTTTATGACTGATGGTGTGGCAGCCAGCAAGTTCAGTGAGATACAGGAGCCTGAGGCCATAATCGTGGCTCCCACCAGAGAACTTATCAATCAGATCTATCTGGAGGCCAGGAAGTTTGCATACGGGACCTGTGTACGACCTGTTGTGGTTTATGGAGGTATAAATACTGGATATACTATCCGAGAGGTGTTAAAGGGCTGCAATGTTCTGTGTGCTACTCCTGGAAGATTGCATGACCTCATTGGTCGTGGAAAGATTGGCCTGAGTAAAGTGCGCTATCTAGTTCTGGATGAAGCAGACAGAATGCTGGACATGGGCTTTGAGCCAGAAATGCGCAAACTGGTGGCGTCTCCTGGTATGCCTTCAAAAGAGGAACGACAAACCCTCATGTTCAGTGCCACCTACCCTGAAGATATTCAAAGAATGGCTGCTGACTTTCTTAAAGTGGACTATATTTTCCTTGCTGTTGGTGTGGTGGGTGGAGCATGCAGTGATGTGGAGCAAACCATTGTTCAGGTGGACCAGTACTCAAAGAGGGACCAGCTGCTTGAATTGCTCAGAGCAACAGGTAATGAGCGCACAATGGTTTTTGTGGAAACCAAAAGAAGTGCTGATTTCATAGCAACATTTCTCTGTCAAGAGAAGATCTCAACCACAAGCATCCAtggTGATCGGGAACAGCGAGAGCGAGAGAAAGCTCTCAGTGATTTTCGCCTTGGCCAGTGTCCAGTTCTGGTCGCCACATCTGTAGCTGCTAGAGGCCTGGATATTGAGCAAGTCCAGCATGTTGTGAATTTTGACATGCCCAGCAGCATCGATGAGTATGTCCATCGCATAGGAAGAACTGGACGCTGTGGGAACACCGGTCGCGCCGTGTCCTTTTTTAACCCAGAGTCTGACACTCCATTAGCTCGCTCCCTGGTCAAAGTCCTTTCAGGGGCCCAACAAGTAGTTCCAAAATGGCTGGAGGAAGTTGCCTTCAGTGCTCATGGGACAACAGGCTTCAACCCACGTGGGAAGGTGTTTGCATCTACAGACTCGCGGAAGGGAGGATCCTTCAAGAGCGATGAGCCGCCACCATCACAAACATCTGCCCCGAGCGCAGCAGCTGCTGCAGACGATGAGGAATGGGAATAACTGGCCTCACAcctgttatatttattttatttttattttatttgtgcgaGCTTCTTCAATACCATTTCAGGATATTTGTTAATGTTGAATGACTAAAGTAGCATTAGGATAAAGCTGTTGTATTTAGAGTCACATTGAATGCTGTAGGTTTGACCTCAAGGACGATAATCAAGACTAATACCTTTTGGCAGTTTAATTTGATCATCTTTTTGGTATCACTCGTTTTGACTGGAGCACATCTGAAATAGTGGATTTGTTTTACTAGAGCACAAGTGCAGAAGTGGGTGGGTTTGTTTAATCACATTTTAACACTTTGCTAGGAGTGTATTGAGTTTTGTAAGCTTTGACCTAAAGGTGTTTCCTACAGTTAAATCTATTAATCAGTTCTATTGTTGATTGTGACTGTTTGTAGGTTATTTTTCTTGACATTTCCGTCTTGAAGCCAGAGTATAGAACAAGAAACTTGTTTTGCAGATGTACCTTGCCAGATAAAGGTAGCtaaagtcattgtttaacagacATCTCtttaattttaaagtcaaaatgttgATAAAATTCAGTCAAGAGGCAGTGACTGACTGTAACAGAGCGGTGCTTCCTCACTAGCTGAAGTGGCTCAAAATAAAGACGGATACTGGTG
>TCONS_00003727
ATGGATGACTGGGAGGAAGATCAGAGTCCCGTTGTGTCTTGCAGCTCAGGATTTGgaGGTGCTGGAAATGACAAGTCAAACAGTGAAGGTACTGAAGGTAGCTCATGGAAAATGACTGGTGATTCGTTCAGGGGGAGAGGAGGCAGGGGAGGATCACGAGGAGGCAGAGGAGGCTTTAGCGGTTTTAAATCAGAAATTGATGAGAATGGCAGCGATGGAGGTTGGAACGGAGGTGAAAGTCGAGGAAAAGGACGTGGTGGTTTCCGTGGTGGTTTTCGCAGTGGCTCCCGTGATGaaaatGATGAAAATGGAAATGATGATGGTTGGAAAGGAGGTGAAAGCCGAGGTAGAGGTCGAGGTGGTTTCGGGGGTGGTTTTCGTGGAGGTTTCCGTGATGGTGGTAATGAAGACACTGGGAGAAGAGGCTTTGGAAGAGAAAATAATGAAAATGGAAACGATGAgggAGGAGAAGGCAGAGGAAGAGGTCGTGGTGGTTTCCGGGGTGGTTTTCGTGATGGTGGTGGTGATGAGAGTGGAAAAAGAGGCTTCGGAAGAGGAGTCACAACTGCAGACAAGTTGGATCAAGAAGGAAGTGAAAATGCAGgaccCAAGGTTGTTTATGTGCCGCCGCCTCCTCCAGAGGAGGAGAGCTCGATATTCTCCCATTATGCAACAGGCATTAATTTTGACAAATATGATGATATTCTTGTGGACGTGAGTGGCAGCAATCCTCCAAAAGCAATTATGacTTTTGAGGAAGCAGGACTTTGTGACTCACTGAGCAAAAATGTATCAAAGTCTGGATATGTGAAGCCTACACCTGTTCAGAAACATGGCATTCCCATCATTTCAGCTGGACGGGATCTAATGGCTTGTGCTCAGACTGGATCAGGAAAAACGGCGGCCTTCCTGCTGCCTATCCTACAGCGCTTTATGACTGATGGTGTGGCAGCCAGCAAGTTCAGTGAGATACAGGAGCCTGAGGCCATAATCGTGGCTCCCACCAGAGAACTTATCAATCAGATCTATCTGGAGGCCAGGAAGTTTGCATACGGGACCTGTGTACGACCTGTTGTGGTTTATGGAGGTATAAATACTGGATATACTATCCGAGAGGTGTTAAAGGGCTGCAATGTTCTGTGTGCTACTCCTGGAAGATTGCATGACCTCATTGGTCGTGGAAAGATTGGCCTGAGTAAAGTGCGCTATCTAGTTCTGGATGAAGCAGACAGAATGCTGGACATGGGCTTTGAGCCAGAAATGCGCAAACTGGTGGCGTCTCCTGGTATGCCTTCAAAAGAGGAACGACAAACCCTCATGTTCAGTGCCACCTACCCTGAAGATATTCAAAGAATGGCTGCTGACTTTCTTAAAGTGGACTATATTTTCCTTGCTGTTGGTGTGGTGGGTGGAGCATGCAGTGATGTGGAGCAAACCATTGTTCAGGTGGACCAGTACTCAAAGAGGGACCAGCTGCTTGAATTGCTCAGAGCAACAGGTAATGAGCGCACAATGGTTTTTGTGGAAACCAAAAGAAGTGCTGATTTCATAGCAACATTTCTCTGTCAAGAGAAGATCTCAACCACAAGCATCCAtggTGATCGGGAACAGCGAGAGCGAGAGAAAGCTCTCAGTGATTTTCGCCTTGGCCAGTGTCCAGTTCTGGTCGCCACATCTGTAGCTGCTAGAGGCCTGGATATTGAGCAAGTCCAGCATGTTGTGAATTTTGACATGCCCAGCAGCATCGATGAGTATGTCCATCGCATAGGAAGAACTGGACGCTGTGGGAACACCGGTCGCGCCGTGTCCTTTTTTAACCCAGAGTCTGACACTCCATTAGCTCGCTCCCTGGTCAAAGTCCTTTCAGGGGCCCAACAAGTAGTTCCAAAATGGCTGGAGGAAGTTGCCTTCAGTGCTCATGGGACAACAGGCTTCAACCCACGTGGGAAGGTGTTTGCATCTACAGACTCGCGGAAGGGAGGATCCTTCAAGAGCGATGAGCCGCCACCATCACAAACATCTGCCCCGAGCGCAGCAGCTGCTGCAGACGATGAGGAATGGGAATAA
>TCONS_00003726
ATGGATGACTGGGAGGAAGATCAGAGTCCCGTTGTGTCTTGCAGCTCAGGATTTGGTCTAGGCTCAAATGGTTCTGATGGAGGATTCAAGAGCTTTTATACAGgaGGTGCTGGAAATGACAAGTCAAACAGTGAAGGTACTGAAGGTAGCTCATGGAAAATGACTGGTGATTCGTTCAGGGGGAGAGGAGGCAGGGGAGGATCACGAGGAGGCAGAGGAGGCTTTAGCGGTTTTAAATCAGAAATTGATGAGAATGGCAGCGATGGAGGTTGGAACGGAGGTGAAAGTCGAGGAAAAGGACGTGGTGGTTTCCGTGGTGGTTTTCGCAGTGGCTCCCGTGATGaaaatGATGAAAATGGAAATGATGATGGTTGGAAAGGAGGTGAAAGCCGAGGTAGAGGTCGAGGTGGTTTCGGGGGTGGTTTTCGTGGAGGTTTCCGTGATGGTGGTAATGAAGACACTGGGAGAAGAGGCTTTGGAAGAGAAAATAATGAAAATGGAAACGATGAggAAGGAGAAGGCAGAGGAAGAGGTCGTGGTGGTTTCCGGGGTGGTTTTCGTGATGGTGGTGGTGATGAGAGTGGAAAAAGAGGCTTCGGAAGAGGAGGTTTTAGAGGCCGGAATGAGGAAGTATTTTCCAAGGTCACAACTGCAGACAAGTTGGATCAAGAAGGAAGTGAAAATGCAGgaccCAAGGTTGTTTATGTGCCGCCGCCTCCTCCAGAGGAGGAGAGCTCGATATTCTCCCATTATGCAACAGGCATTAATTTTGACAAATATGATGATATTCTTGTGGACGTGAGTGGCAGCAATCCTCCAAAAGCAATTATGacTTTTGAGGAAGCAGGACTTTGTGACTCACTGAGCAAAAATGTATCAAAGTCTGGATATGTGAAGCCTACACCTGTTCAGAAACATGGCATTCCCATCATTTCAGCTGGACGGGATCTAATGGCTTGTGCTCAGACTGGATCAGGAAAAACGGCGGCCTTCCTGCTGCCTATCCTACAGCGCTTTATGACTGATGGTGTGGCAGCCAGCAAGTTCAGTGAGATACAGGAGCCTGAGGCCATAATCGTGGCTCCCACCAGAGAACTTATCAATCAGATCTATCTGGAGGCCAGGAAGTTTGCATACGGGACCTGTGTACGACCTGTTGTGGTTTATGGAGGTATAAATACTGGATATACTATCCGAGAGGTGTTAAAGGGCTGCAATGTTCTGTGTGCTACTCCTGGAAGATTGCATGACCTCATTGGTCGTGGAAAGATTGGCCTGAGTAAAGTGCGCTATCTAGTTCTGGATGAAGCAGACAGAATGCTGGACATGGGCTTTGAGCCAGAAATGCGCAAACTGGTGGCGTCTCCTGGTATGCCTTCAAAAGAGGAACGACAAACCCTCATGTTCAGTGCCACCTACCCTGAAGATATTCAAAGAATGGCTGCTGACTTTCTTAAAGTGGACTATATTTTCCTTGCTGTTGGTGTGGTGGGTGGAGCATGCAGTGATGTGGAGCAAACCATTGTTCAGGTGGACCAGTACTCAAAGAGGGACCAGCTGCTTGAATTGCTCAGAGCAACAGGTAATGAGCGCACAATGGTTTTTGTGGAAACCAAAAGAAGTGCTGATTTCATAGCAACATTTCTCTGTCAAGAGAAGATCTCAACCACAAGCATCCAtggTGATCGGGAACAGCGAGAGCGAGAGAAAGCTCTCAGTGATTTTCGCCTTGGCCAGTGTCCAGTTCTGGTCGCCACATCTGTAGCTGCTAGAGGCCTGGATATTGAGCAAGTCCAGCATGTTGTGAATTTTGACATGCCCAGCAGCATCGATGAGTATGTCCATCGCATAGGAAGAACTGGACGCTGTGGGAACACCGGTCGCGCCGTGTCCTTTTTTAACCCAGAGTCTGACACTCCATTAGCTCGCTCCCTGGTCAAAGTCCTTTCAGGGGCCCAACAAGTAGTTCCAAAATGGCTGGAGGAAGTTGCCTTCAGTGCTCATGGGACAACAGGCTTCAACCCACGTGGGAAGGTGTTTGCATCTACAGACTCGCGGAAGGGAGGATCCTTCAAGAGCGATGAGCCGCCACCATCACAAACATCTGCCCCGAGCGCAGCAGCTGCTGCAGACGATGAGGAATGGGAATAA
>TCONS_00003725
ATGGATGACTGGGAGGAAGATCAGAGTCCCGTTGTGTCTTGCAGCTCAGGATTTGgaGGTGCTGGAAATGACAAGTCAAACAGTGAAGGTACTGAAGGTAGCTCATGGAAAATGACTGGTGATTCGTTCAGGGGGAGAGGAGGCAGGGGAGGATCACGAGGAGGCAGAGGAGGCTTTAGCGGTTTTAAATCAGAAATTGATGAGAATGGCAGCGATGGAGGTTGGAACGGAGGTGAAAGTCGAGGAAAAGGACGTGGTGGTTTCCGTGGTGGTTTTCGCAGTGGCTCCCGTGATGaaaatGATGAAAATGGAAATGATGATGGTTGGAAAGGAGGTGAAAGCCGAGGTAGAGGTCGAGGTGGTTTCGGGGGTGGTTTTCGTGGAGGTTTCCGTGATGGTGGTAATGAAGACACTGGGAGAAGAGGCTTTGGAAGAGAAAATAATGAAAATGGAAACGATGAgggAGGAGAAGGCAGAGGAAGAGGTCGTGGTGGTTTCCGGGGTGGTTTTCGTGATGGTGGTGGTGATGAGAGTGGAAAAAGAGGCTTCGGAAGAGGAGGTTTTAGAGGCCGGAATGAGGAAGTATTTTCCAAGGTCACAACTGCAGACAAGTTGGATCAAGAAGGAAGTGAAAATGCAGgaccCAAGGTTGTTTATGTGCCGCCGCCTCCTCCAGAGGAGGAGAGCTCGATATTCTCCCATTATGCAACAGGCATTAATTTTGACAAATATGATGATATTCTTGTGGACGTGAGTGGCAGCAATCCTCCAAAAGCAATTATGacTTTTGAGGAAGCAGGACTTTGTGACTCACTGAGCAAAAATGTATCAAAGTCTGGATATGTGAAGCCTACACCTGTTCAGAAACATGGCATTCCCATCATTTCAGCTGGACGGGATCTAATGGCTTGTGCTCAGACTGGATCAGGAAAAACGGCGGCCTTCCTGCTGCCTATCCTACAGCGCTTTATGACTGATGGTGTGGCAGCCAGCAAGTTCAGTGAGATACAGGAGCCTGAGGCCATAATCGTGGCTCCCACCAGAGAACTTATCAATCAGATCTATCTGGAGGCCAGGAAGTTTGCATACGGGACCTGTGTACGACCTGTTGTGGTTTATGGAGGTATAAATACTGGATATACTATCCGAGAGGTGTTAAAGGGCTGCAATGTTCTGTGTGCTACTCCTGGAAGATTGCATGACCTCATTGGTCGTGGAAAGATTGGCCTGAGTAAAGTGCGCTATCTAGTTCTGGATGAAGCAGACAGAATGCTGGACATGGGCTTTGAGCCAGAAATGCGCAAACTGGTGGCGTCTCCTGGTATGCCTTCAAAAGAGGAACGACAAACCCTCATGTTCAGTGCCACCTACCCTGAAGATATTCAAAGAATGGCTGCTGACTTTCTTAAAGTGGACTATATTTTCCTTGCTGTTGGTGTGGTGGGTGGAGCATGCAGTGATGTGGAGCAAACCATTGTTCAGGTGGACCAGTACTCAAAGAGGGACCAGCTGCTTGAATTGCTCAGAGCAACAGGTAATGAGCGCACAATGGTTTTTGTGGAAACCAAAAGAAGTGCTGATTTCATAGCAACATTTCTCTGTCAAGAGAAGATCTCAACCACAAGCATCCAtggTGATCGGGAACAGCGAGAGCGAGAGAAAGCTCTCAGTGATTTTCGCCTTGGCCAGTGTCCAGTTCTGGTCGCCACATCTGTAGCTGCTAGAGGCCTGGATATTGAGCAAGTCCAGCATGTTGTGAATTTTGACATGCCCAGCAGCATCGATGAGTATGTCCATCGCATAGGAAGAACTGGACGCTGTGGGAACACCGGTCGCGCCGTGTCCTTTTTTAACCCAGAGTCTGACACTCCATTAGCTCGCTCCCTGGTCAAAGTCCTTTCAGGGGCCCAACAAGTAGTTCCAAAATGGCTGGAGGAAGTTGCCTTCAGTGCTCATGGGACAACAGGCTTCAACCCACGTGGGAAGGTGTTTGCATCTACAGACTCGCGGAAGGGAGGATCCTTCAAGAGCGATGAGCCGCCACCATCACAAACATCTGCCCCGAGCGCAGCAGCTGCTGCAGACGATGAGGAATGGGAATAA

Function

symbol description
ddx4 Predicted to enable RNA binding activity and RNA helicase activity. Acts upstream of or within germ cell development; gonad development; and regulation of meiotic cell cycle. Located in P granule. Is expressed in several structures, including blastodisc; germ line cell; reproductive system; shield; and unfertilized egg. Orthologous to human DDX4 (DEAD-box helicase 4).

GO:

id name namespace
GO:0008406 gonad development biological_process
GO:0051445 regulation of meiotic cell cycle biological_process
GO:0030154 cell differentiation biological_process
GO:0007276 gamete generation biological_process
GO:0007281 germ cell development biological_process
GO:0005634 nucleus cellular_component
GO:0043186 P granule cellular_component
GO:0005524 ATP binding molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0003723 RNA binding molecular_function
GO:0003724 RNA helicase activity molecular_function
GO:0004386 helicase activity molecular_function

KEGG:

id description
ko03036 Chromosome and associated proteins

ZFIN:

id description
ZDB-GENE-990415-272 Predicted to enable RNA binding activity and RNA helicase activity. Acts upstream of or within germ cell development; gonad development; and regulation of meiotic cell cycle. Located in P granule. Is expressed in several structures, including blastodisc; germ line cell; reproductive system; shield; and unfertilized egg. Orthologous to human DDX4 (DEAD-box helicase 4).

Ensembl:

ensembl_id ENSDARG00000014373

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003722 False 2519 mRNA 0.47 26 6884123 6905256
TCONS_00003723 False 2787 mRNA 0.46 25 6884137 6905574
TCONS_00003724 False 2856 mRNA 0.46 27 6884152 6905574
TCONS_00003727 False 2067 mRNA 0.49 24 6884627 6904934
TCONS_00003726 False 2151 mRNA 0.49 26 6884627 6904934
TCONS_00003725 True 2103 mRNA 0.49 25 6884627 6904934

Neighbor

gene id symbol gene type direction distance location
XLOC_001884 NA coding upstream 128357 6754270 ~ 6755766 (+)
XLOC_001883 si:ch211-57m13.10 coding upstream 131008 6747720 ~ 6753115 (+)
XLOC_001882 si:ch211-57m13.9 coding upstream 149326 6729670 ~ 6734797 (+)
XLOC_001881 si:ch211-57m13.8 coding upstream 181311 6697369 ~ 6702812 (+)
XLOC_001880 si:ch211-57m13.7 coding upstream 197148 6681523 ~ 6686975 (+)
XLOC_001886 slc38a9 coding downstream 2141 6907715 ~ 6944407 (+)
XLOC_001887 psd3l coding downstream 124090 7029664 ~ 7233955 (+)
XLOC_001888 fut10 coding downstream 350121 7255695 ~ 7264766 (+)
XLOC_001889 purg coding downstream 658181 7563755 ~ 7565074 (+)
XLOC_001890 BX537303.1 coding downstream 667742 7573316 ~ 7578051 (+)
XLOC_001871 NA non-coding upstream 767187 6116294 ~ 6116936 (+)
XLOC_001868 NA non-coding upstream 1002890 5880700 ~ 5881233 (+)
XLOC_001867 NA non-coding upstream 1090597 5788407 ~ 5793526 (+)
XLOC_001864 NA non-coding upstream 1295893 5587960 ~ 5588230 (+)
XLOC_001897 NA non-coding downstream 903137 7808711 ~ 7809243 (+)
XLOC_001898 NA non-coding downstream 937832 7843406 ~ 7849873 (+)
XLOC_001899 NA non-coding downstream 965035 7870609 ~ 7901888 (+)
XLOC_001900 NA non-coding downstream 1072943 7978517 ~ 7984582 (+)

Expression


Co-expression Network