XLOC_018900 (lmbrd2b)


Basic Information

Item Value
gene id XLOC_018900
gene name lmbrd2b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 22400951 ~ 22422939 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00037562
GCGTGACGTTTGTGATTTTCTGGAAATCAGTGAAATGTGGATTTTGTCCAGTTGCTCTCAGTGCCAGAAAGAGTGAGAGGAGTGCGGTCAGCACTATGAGCGGGGCAGCGCTGGGAATAGAGATTGTGGTGGTCTTTTTCCTGGCTCTCTTCCTCCTGCATCGCTATGGAGACTTCAAAAAGCAGCAGCGCATGGTTCTCTTTGGCACACTGCTGGCCTGGTATTTGTGCTTTCTCATCGTTTTTATTCTTCCTCTGGACGTCAGCACGACAATCTACAACCAGTGTTTAATTGATCAGGAGGCACAAACTCAGACGCCCTCTGTGAGCCCTGTCCTTTCAGAGCAGATGACTGCAAATGCCTCCATCTCACCCGCTAAAAGCACTCAACGTGTGTGCTATAAACCATGGAGCTACATTCCAGATGGCATCATGCCTGTTTTCTGGAGAGTTGTTTATTGGACCTCACAGTGTCTTACTTGGCTCCTTCTGCCATTCATGCAGTCTTATGCTCGCTCTGGAGGATTCACCATTACAGGAAAGATCAAGACAGCCCTCATTGAGAACGCCATCTATTATGGCACATACCTTTTCATCTTCGGCTCTCTTCTCATCTATGTGGCTGTGCATCCACAGTGGCACCTCTCCTGGTATGAGCTGCAAACCATTGGCATCACTGCGGCCAACACTTGGGGTCTGTTTCTGCTGGTGCTGCTTCTGGGTTATGGCCTGGTGGAGATCCCTCGCTCGTACTGGGAGGCCTCACGCCAGGGTCACCTCCTCATCAAAACTTACTTCAAAGCGGCCAAGCTCATGACAGAAAAGGCAGATTCAGAAGAGAACCTAGAAGATGTCATGGAGGAAGTGAGAAAAATCAACGAATCCATCAAATATAACCATCCCTTGAGAAAGAATGTGGACACCATTCTCCGAAAGTGTCCACTTGAATATCAGGAGAAAATGGGCAGGAATATGGATGATTTTGAGGATTTTGATGATAAGCAAAACTCATATCCTACTGAAAGAAGCCTTTCAAAACTACACAAGCAGGTGATCTACGCTGTACAGCGGCACAACCGCACTCGTGTTCAGTGGCAGATTTTGCTGGAACAGGCTTTCCATCTCGAGGATGTTGCCAAGAACGAAACTAGCACCTCTCGCCAGTTTGTTCACAGTTTTGCTCCTCTAGAACCAGTTGGCTGGTTCAGACGCTACATTTATACTCCCACAGCAGAGTGGTACTGGGAGTGTTTGCTGAAGCAGTGGTTTTACCGTGTTCTGGCAGTGGTTCTGGCGCTCTTTTCGGTGGCTGTGGTTTGGTCTGAGTGCACTTTTTTCAGTACTCATCCCGTTCTGTCACTCTTTGCTGTGTTCATCCAGCTTGCCGAGAGGGATTACAACTATCTGTACATTGAGATGGCGTGCTTCATCACCATCTTTTTCCTCTGTACCTGCGTCTACTCTACTGTGTTTCGCATCCGAGTCTTCAACTACTATTACCTGGCCTCACATCACCAAACTGACGCCTACAGCCTGCAGTTCAGCGGCATGCTTTTTTGCCGTTTGACTCCACCACTATGTCTAAACTTCCTGGGACTGATTCACATGGATTCTGCCATATCCCACCAAGCAAAGAAGCAGACGGCATACACCTCTATCATGGGTTCCATGCGGGTCCTGTCCTTCATTGCCAATGGCTTCTACATCTATTACCCGATGTTGATCGTCATTCTCTGCATTGCTACATACTTCAGTCTTGGCACACGCTGTCTGAACCTCCTGGGTTTCCAGCAGTTCATGGGAGAAAATGAAATGACCTCAGACCTCATAGATGAAGGCAGAGAACTCTTGCGCAGAGAAAGAAGAAAACGGCAAAGAATAGAAGATGGGGAGAACAGACGAAGAgAATGGAGAGAGCGTTATGCTCAGCGAGATGAGAATGCTGCCCGAAATCGGACTTCCATGTCTGAAATGAAGGAAACCAACTATGGGGAAACTCTAAATGCAAACACAAACCGACagGCAAAGTACACACGAAGTGGCAGCCAATCAGGACGAGACAGCATTGAGTTGTTACAAGATGCCGAGCCACTGGATTTTAATGCTGAAACACTCACTGATGACCCATTGCAGTCCGACACTGGCAGACATGCTGGTGGAAGGTACCTCTCGATGTCATCTTCTCGAAACCGAATCTTTGATGACGTTTGATGTTTTCGAAGTGAAAAACACTGTCTCTACAAGAAATCGAGTTGAATTTTACCTCTAAAACACTCATGTCTACAGGTGTGGTTTGTCCCTGTCATTTTAAACCTCTTTGACTTCCTGTATCCTGTATTGCAGTGTTAGCTATCTGCATGCATCCTGATAAACACACAGCAAAAGTACACACAGATTTGAAGTGCCGGACAGTCAGACTGCTGCATGTGACAAATGAGCATTCTCTTTTGCACAgttgtgtttttcttcttcttcattttAAGAAAtgagtcaaacagtcagtcatgAAATGTACTACAGTCATCAGACACACTACTGTTTCTCATCATTTGCTGCTGATAGTGATCAGGTAGTGTACCTGAGCGTGTACAGCAGTCGAGTGAATATAAAATGATGTGAAAGTGGCCAATCTGTGTTAGTTATAGATGTGAGGAGATTTTGTAGGGGTAGATCAGAATACTGTGCTTTTTTTTGTACATGTGAATATTTTTTAGGCAAAAATCCAAATTAGTCTGCAGAGTTgcaaaaaaatactattattattatattcatttggCTTCGGCTGATCTAACAGACATATATGAATTCATGTCTATTTATTGTCTATGTAAGCTGGTTAGTGGCTACTGAATGAATcttgaagtattttattttatattatttatttctgctcttttattaaattttacatCTTATCTCCTAGATTAGCTAAGCTGAGTTCCTCTTAACATTCCATCCATGAACCTGTTCctgaattatttaatataaaagaaGAAACGCTTAAACTAACCTATTTATTTTCACAACTGTTTAAGTGGCACATAAAGCTATATTATTTATTGACACATCTGTGATTGTTTCTCTATAGACTTTCTTCTTATTTATAATCACGTTACGTTTGGCACCGTATTTTAGCGGTAGTCGGGGGGATGAATGTCTTGTAGGCCATTTGTGCTTTGAACTGTCTTTTTTGAAAAATAGGCAAGGCTGTTGAAACAGCTTTATGGACATGCTCTGTTTGTGGGCTCAGAGTGCATtgttttaaataagattttacaGACTTGCAAGCATCACTTTATCATGCACAGAAAACAGACGTTTAGTATTCAAATGTGTGGAAGATTTCATTCCAAGCATATAACAAGAGTGCATGGGAAGACTTGTAGgattttgttttatgaaattcttGTGCATAGGTGTCATCTAACATATCCAGTGTACATTTTGCATGGTATTCTACTGAATCTGCAGAGGAGTCTAGTTCTTGTTTCTCACAGGAAATGCAGCAGTAGCTGTATATATAGTGTTGTTCACACCACAAATACTAAGCATCATGGTTTCATCTCAGATAAATGCGTTTCCTTAATAAATGAAACCGTCTGGTTTAAAGAAACCAGAAAGCCATTTTTTCATTCATACCTTTGGTTTACTGATGAAGTTATTTATTTCTACAATGTGTTTATGAAAAATGAAATAACTGTGTTGCCAATGAGGTAATTTTTATATGGTCAGTCCTTACTCAAATATTGTGTTGATGAAAGCCAACTGGAATCTGATGCTGAAATCTGTTGATTTGTATATTGGTGTCAGTAAAATGTGCTCTTTTCCTAATAGGCTAGACACATGTAATCTTgcagttattaataaaaatattcattcattcacaa
>TCONS_00037563
TTGCTCTCAGTGCCAGAAAGAGTGAGAGGAGTGCGGTCAGCACTATGAGCGGGGCAGCGCTGGGAATAGAGATTGTGGTGGTCTTTTTCCTGGCTCTCTTCCTCCTGCATCGCTATGGAGACTTCAAAAAGCAGCAGCGCATGGTTCTCTTTGGCACACTGCTGGCCTGGTATTTGTGCTTTCTCATCGTTTTTATTCTTCCTCTGGACGTCAGCACGACAATCTACAACCAGTGTTTAATTGATCAGGAGGCACAAACTCAGACGCCCTCTGTGAGCCCTGTCCTTTCAGAGCAGATGACTGCAAATGCCTCCATCTCACCCGCTAAAAGCACTCAACGTGTGTGCTATAAACCATGGAGCTACATTCCAGATGGCATCATGCCTGTTTTCTGGAGAGTTGTTTATTGGACCTCACAGTGTCTTACTTGGCTCCTTCTGCCATTCATGCAGTCTTATGCTCGCTCTGGAGGATTCACCATTACAGGAAAGATCAAGACAGCCCTCATTGAGAACGCCATCTATTATGGCACATACCTTTTCATCTTCGGCTCTCTTCTCATCTATGTGGCTGTGCATCCACAGTGGCACCTCTCCTGGTATGAGCTGCAAACCATTGGCATCACTGCGGCCAACACTTGGGGTCTGTTTCTGCTGGTGCTGCTTCTGGGTTATGGCCTGGTGGAGATCCCTCGCTCGTACTGGGAGGCCTCACGCCAGGGTCACCTCCTCATCAAAACTTACTTCAAAGCGGCCAAGCTCATGACAGAAAAGGCAGATTCAGAAGAGAACCTAGAAGATGTCATGGAGGAAGTGAGAAAAATCAACGAATCCATCAAATATAACCATCCCTTGAGAAAGAATGTGGACACCATTCTCCGAAAGTGTCCACTTGAATATCAGGAGAAAATGGGCAGGAATATGGATGATTTTGAGGATTTTGATGATAAGCAAAACTCATATCCTACTGAAAGAAGCCTTTCAAAACTACACAAGCAGGTGATCTACGCTGTACAGCGGCACAACCGCACTCGTGTTCAGTGGCAGATTTTGCTGGAACAGGCTTTCCATCTCGAGGATGTTGCCAAGAACGAAACTAGCACCTCTCGCCAGTTTGTTCACAGTTTTGCTCCTCTAGAACCAGTTGGCTGGTTCAGACGCTACATTTATACTCCCACAGCAGAGTGGTACTGGGAGTGTTTGCTGAAGCAGTGGTTTTACCGTGTTCTGGCAGTGGTTCTGGCGCTCTTTTCGGTGGCTGTGGTTTGGTCTGAGTGCACTTTTTTCAGTACTCATCCCGTTCTGTCACTCTTTGCTGTGTTCATCCAGCTTGCCGAGAGGGATTACAACTATCTGTACATTGAGATGGCGTGCTTCATCACCATCTTTTTCCTCTGTACCTGCGTCTACTCTACTGTGTTTCGCATCCGAGTCTTCAACTACTATTACCTGGCCTCACATCACCAAACTGACGCCTACAGCCTGCAGTTCAGCGGCATGCTTTTTTGCCGTTTGACTCCACCACTATGTCTAAACTTCCTGGGACTGATTCACATGGATTCTGCCATATCCCACCAAGCAAAGAAGCAGACGGCATACACCTCTATCATGGGTTCCATGCGGGTCCTGTCCTTCATTGCCAATGGCTTCTACATCTATTACCCGATGTTGATCGTCATTCTCTGCATTGCTACATACTTCAGTCTTGGCACACGCTGTCTGAACCTCCTGGGTTTCCAGCAGTTCATGGGAGAAAATGAAATGACCTCAGACCTCATAGATGAAGGCAGAGAACTCTTGCGCAGAGAAAGAAGAAAACGGCAAAGAATAGAAGATGGGGAGAACAGACGAAGAgAATGGAGAGAGCGTTATGCTCAGCGAGATGAGAATGCTGCCCGAAATCGGACTTCCATGTCTGAAATGAAGGAAACCAACTATGGGGAAACTCTAAATGCAAACACAAACCGACagGCAAAGTACACACGAAGTGGCAGCCAATCAGGACGAGACAGCATTGAGTTGTTACAAGATGCCGAGCCACTGGATTTTAATGCTGAAACACTCACTGATGACCCATTGCAGTCCGACACTGGCAGACATGCTGGTGGAAGGTACCTCTCGATGTCATCTTCTCGAAACCGAATCTTTGATGACGTTTGATGTTTTCGAAGTGAAAAACACTGTCTCTACAAGAAATCGAGTTGAATTTTACCTCTAAAACACTCATGTCTACAGGTGTGGTTTGTCCCTGTCATTTTAAACCTCTTTGACTTCCTGTATCCTGTATTGCAGTGTTAGCTATCTGCATGCATCCTGATAAACACACAGCAAAAGTACACACAGATTTGAAGTGCCGGACAGTCAGACTGCTGCATGTGACAAATGAGCATTCTCTTTTGCACAgttgtgtttttcttcttcttcattttAAGAAAtgagtcaaacagtcagtcatgAAATGTACTACAGTCATCAGACACACTACTGTTTCTCATCATTTGCTGCTGATAGTGATCAGGTAGTGTACCTGAGCGTGTACAGCAGTCGAGTGAATATAAAATGATGTGAAAGTGGCCAATCTGTGTTAGTTATAGATGTGAGGAGATTTTGTAGGGGTAGATCAGAATACTGTGCTTTTTTTTGTACATGTGAATATTTTTTAGGCAAAAATCCAAATTAGTCTGCAGAGTTgcaaaaaaatactattattattatattcatttggCTTCGGCTGATCTAACAGACATATATGAATTCATGTCTATTTATTGTCTATGTAAGCTGGTTAGTGGCTACTGAATGAATcttgaagtattttattttatattatttatttctgctcttttattaaattttacatCTTATCTCCTAGATTAGCTAAGCTGAGTTCCTCTTAACATTCCATCCATGAACCTGTTCctgaattatttaatataaaagaaGAAACGCTTAAACTAACCTATTTATTTTCACAACTGTTTAAGTGGCACATAAAGCTATATTATTTATTGACACATCTGTGATTGTTTCTCTATAGACTTTCTTCTTATTTATAATCACGTTACGTTTGGCACCGTATTTTAGCGGTAGTCGGGGGGATGAATGTCTTGTAGGCCATTTGTGCTTTGAACTGTCTTTTTTGAAAAATAGGCAAGGCTGTTGAAACAGCTTTATGGACATGCTCTGTTTGTGGGCTCAGAGTGCATtgttttaaataagattttacaGACTTGCAAGCATCACTTTATCATGCACAGAAAACAGACGTTTAGTATTCAAATGTGTGGAAGATTTCATTCCAAGCATATAACAAGAGTGCATGGGAAGACTTGTAGgattttgttttatgaaattcttGTGCATAGGTGTCATCTAACATATCCAGTGTACATTTTGCATGGTATTCTACTGAATCTGCAGAGGAGTCTAGTTCTTGTTTCTCACAGGAAATGCAGCAGTAGCTGTATATATAGTGTTGTTCACACCACAAATACTAAGCATCATGGTTTCATCTCAGATAAATGCGTTTCCTTAATAAATGAAACCGTCTGGTTTAAAGAAACCAGAAAGCCATTTTTTCATTCATACCTTTGGTTTACTGATGAAGTTATTTATTTCTACAATGTGTTTATGAAAAATGAAATAACTGTGTTGCCAATGAGGTAATTTTTATATGGTCAGTCCTTACTCAAATATTGTGTTGATGAAAGCCAACTGGAATCTGATGCTGAAATCTGTTGATTTGTATATTGGTGTCAGTAAAATGTGCTCTTTTCCTAATAGGCTAGACACATGTAATCTTgcagttattaataaaaatattcattcattcacaattgtctctgtgtttgtttttaacccTTACaagttaaaaatagtttttaccaTTTGTATAACCA

Function

symbol description
lmbrd2b Predicted to be involved in adrenergic receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be active in membrane. Orthologous to human LMBRD2 (LMBR1 domain containing 2).

GO:

id name namespace
GO:0071875 adrenergic receptor signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-7197 Predicted to be involved in adrenergic receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be active in membrane. Orthologous to human LMBRD2 (LMBR1 domain containing 2).

Ensembl:

ensembl_id ENSDARG00000017312

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00037562 False 3886 mRNA 0.42 18 22400951 22422876
TCONS_00037563 True 3898 mRNA 0.42 17 22404662 22422939

Neighbor

gene id symbol gene type direction distance location
XLOC_018899 CU466287.3 coding upstream 28739 22369869 ~ 22372212 (+)
XLOC_018898 nadk2 coding upstream 54228 22330005 ~ 22346723 (+)
XLOC_018897 myo7ab coding upstream 91485 22237964 ~ 22309466 (+)
XLOC_018896 NA coding upstream 175053 22225366 ~ 22225898 (+)
XLOC_018895 capn5b coding upstream 186217 22158744 ~ 22214734 (+)
XLOC_018901 capslb coding downstream 347 22423286 ~ 22428328 (+)
XLOC_018902 chek1 coding downstream 135248 22558187 ~ 22565170 (+)
XLOC_018903 si:dkeyp-69c1.7 coding downstream 207358 22630297 ~ 22634926 (+)
XLOC_018904 NA coding downstream 212465 22635404 ~ 22662564 (+)
XLOC_018905 bud13 coding downstream 274120 22697059 ~ 22705347 (+)
XLOC_018893 NA non-coding upstream 297778 22098376 ~ 22103173 (+)
XLOC_018892 CR854959.2 non-coding upstream 364774 22036061 ~ 22036177 (+)
XLOC_018891 CR854959.1 non-coding upstream 480742 21920077 ~ 21920209 (+)
XLOC_018906 NA non-coding downstream 297275 22720214 ~ 22733107 (+)
XLOC_018914 NA non-coding downstream 625598 23048537 ~ 23051547 (+)
XLOC_018917 NA non-coding downstream 737198 23160137 ~ 23164308 (+)
XLOC_018918 NA non-coding downstream 882587 23305526 ~ 23308245 (+)

Expression


Co-expression Network