XLOC_000019 (tpp2)


Basic Information

Item Value
gene id XLOC_000019
gene name tpp2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 418869 ~ 443759 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000040
GCTGCGCCTTTAAGAGCGTCGTCGCACATTGTGTCGGTACCGGTGTCCGCTGTTTCGTGTTGTGTTTTCATCCTCCTTCTGTACGGTCATGTCTGCTCATTCCGCCGAAGAACCGTTCCCGTTTCACGGGCTGCTCCCGAAAAAAGAGACCGGCGCTGCTTCGTTCCTCACTAAGTACCCGGAGTACGATGGCCGAGGGGTGCTCATCGCGATTCTCGACACCGGCGTGGACCCAGGGGCCCCGGGCATGCAGATCACCACAGACGGAAAGCCGAAGATCGTGGACATCATCGACACCACGGGCAGCGGTGACGTGAACATGAGCACAGTGGTGGAGGTGAAGGAGGGCAGTGTGAGCGGTCTGACTGGACGCACGCTTAAAATTCCTGCAGCGTGGGTCAATCCGTCTGGGAAATATCACATTGGAGTGAAAAACGGCTATGATTTCTTCCCTAAAGCTCTTAAAGAGAGAATACAGAAAGAGCGCAAGGAGAAGCTGTGGGATCCGACACACCGAGCAGCTCTCGCTGAGGCCAGCCGCAGGACAGAAGAGTTcgaccaaacacacacaaaccccTCACAGatggAGAAGCTCCAGAAGGAGGAGCTGCAGTGTCATGTGGAGCTGCTGGGAATGCTGGAGAAGAAATACAGTGATCCTGGACCCGTGTATGACTGTATATCATGGCACGACGGGGTCACGTGGAGggctGTGGTGGACACGTCTGAGTGTGGAGATCTGTCGTCCTGCACTGTCCTCAGCTCCTACAGAGAGAGACAGGAGTTCTGCACGCTGGGATTCGCTGAGATGCTCAACTTCTCCGTCAACATCTATGATGAGGGAAACACACTCTGCATCGTCACCAGCGGAGggGCTCATGGGACACACGTGGCCAGCATCGCAGCAGGTCATTTCCCAGATGAACCCGAGCGTAACGGTGTGGCTCCTGGAGCTCAGATCCTGGCGCTGAAGATCGGAGACACTCGCCTGAGCACCATGGAGACGGGAACCGGCCTCATACGAGCGATGATTGAAGTTATAAACTATAAGTGTGATCTTGTGAACTACAGTTACGGTGAAGCGACGCATTGGCCAAACTCAGGGAGAATCTGTGAGGTCATCACGGAGGCTGTACAGAAGTATAATGTTATGTTCGTGTCGAGTGCGGGGAATAACGGTCCATGTCTGACCACCGTGGGCTGTCCTGGAGGAACCACCAGCAGTGTGATCGGAGTGGGAGCGTATGTTACTCCAGATATGATGGTGGCCGAGTATTCTCTGAGAGAGAAGCTTCCTCCTAACCAGTACACCTGGTCATCCCGTGGGCCCTGCACAGACGGCGCTCTGGGCGTCAGTATTAGTGCTCCGGGCGGCGCCATCGCCTCCGTGCCCAACTGGACGCTGCGCGGCACTCAGCTGATGAACGGCACGTCCATGTCCTCCCCGAACGCCTGCGGAGGAATCGCCCTCGTGCTGTCAGGTCTGAAGCAGAACGGTCTGCGGCCCACGGTGCCGGCGGTGCGCAGAGCTCTGGAGAACACAGCTCAGAAGGTGGAGGAGATCGAGGTGTTTGCGCAGGGACACGGAATCATACAGGTGGAGAGGGCGTTCGACTACCTCATGCAGCACAATTCTCTGGCCTCCAGCAGTCTGGGCTTCAGCGTCAGTGCAGGATCTCAGAGAGGAATCTACCTCAGAGACGCCACACACGTCACTGCACCATCTGACCACGGCGTCGGCATCGAGCCGATCTTTCCAGAGAACACCGAGAACGCAGCTCGTATCTCTCTGCAGCTTCACCTGGCGCTGGTCTGTAATGCGTCCTGGGTTCAGTGTCCGTCCCATCTGGAGCTCATGAATCAGTGCAGGCATGTGAATGTGCGCATCGACCCACAGGGCCTTCGAGAGGGACTGCACTACACCGAGGTGTGTGGATACGACACAACTGCTCTCAGCGCCGGCCCGCTCTTCAGAGTGCCCATAACCGTTATAATCCCTACCAAAGTATCTGACAGTCGCAGTCAGGAGCTCTCCTTCACTGATGTTCACTTCCGGCCAGGACAGATCCGTCGCCACTTCATCACCGTCCCTCAAGGAGCATCATGGGCAGaGATCTCTCTGACGTCTCACACTGGCGACGTGTCCTCGAAGTTCGTCCTGCATGCGGTTCATCTGGTGAAGCAGCGAGCGTATCGAGCCAACGAGTTCTACAAGTTCTCCTCTCTGCTGGAGAAAGGCTCGCTCACAGAGGCCTTTCCAGTGCTGccAGGTCGGACTCTGGAGCTGTGTATTGCGCGCTGGTGGGCGAGTCTCGGTGATGTCACCATCGATTATGTCATTTCCTTCCACGGCCTGGTGACGTCGCCCTCTCCTATTCACATCCACGCTTCTGAAGGCATTTCTAGTTTTGAGGTTTGCTCTCCGTTGAGATATGAAGATGTTTCTCCAACAATCACACTGAAGAACTGGGTTCAGCCGCTCCGGCCTGTAAGTTCTAAAATCAAACCGCTGGGCATGAGAGACGTGTTGCCCAATAACAGGCAGCTCTATGAGCTCGTCCTCACCTATAATTTCCACCAGCCGAAGAGCGGCGAGGTGACACCCAGCTGTCCACTGCTCTGTGAGTTATTATACGAGTCTGAGTTCGACAGTCAACTCTGGCTCCTGTTTGACCAGAACAAGAGGCTCATGGGATCTGGAGATGCGTACCCACACCAGtactCTCTGAAGCTGGAGAAAGGCGACTACACTGTGCGTCTGCAGGTGCGTCACGAGCAGCAGAGTGAGCTGGAGCGTCTGAAGGATCTGCCGTTCGTGGTGTCTCACCGTCTGTCCAACACTCTCTCGCTGGACGTCTACGAGACGCATCGCGCCGCCCTGCTGGCCAAGAAGAAGGCCAACTCCATCACACTGAGCCCCGGGGCCTCACAGCCGTTCTACATCACCAGTCTGCCCGACGACAAGATCCCTAAAGGCTCCGGTCCAGGCGGGTTCATCTCCGGCTCTCTGGTTCTGCCCAAGAGTGAGTTCGGCAAAAAAGCACAGGGACAAGCTTCAGCCAAACGACAAGGAAAATTTAAAAAGGATATCGTGCCAATCTTTTACCACCTGGTTCCTGCTCCCAACAAAAGCAAGAACGGGAAGGAGAAGGAGAAGGACCCGGAGAAGGAGAAGGACGTGAAGGAGGAGTTCAGTGAGGCGCTGCGGGACCTGAAGATCCAGTGGATGAGCAAACTGGACAACAGTTCACTGTATGAGGAGCTGAAGGAGGCGTTTCCTACACACCTGCCACTGCATGTGCAGAGACTCCATCAGCTCGACTCTGAGAAGGAGCGTCTGAAGCGTCTGCCGGAGATTGTATCCGCTGCAGAGTCAGTGATGTCACACATCGATCAGACGGCGCTGGCAGTGTACCTCACCATGAAGACGGACCCACGGCCCGACGCCGCCTCCATCaagagtgatATGGAGAAGCAGAAGGCGTCTCTGCTGGATGCGCTCTGCAGGAAGGGCTGTGCTCTGGCGGATCAGCTGATGCAGACGCCGCTGCAGGACGGGGCCAGTGCCGGACAGGTGAGCAGCTCGGAGGAGGAGTCAGTGGGCGTGGCCAAAGCTCTGACGGACACCTTCTGGGAGCTGCAGAAGTGGGCGGAGCTTACAGACTCTAAGGTTTTGTCGTTCTCCTATAAGCATGCGCTGGCCAATAAGATGTACGCCAGAGCCTTGAAATACGCAATAAAGATTGTAGAGGACAAACCCAGCAGAGAGAACTCCAAGAACTGCTTACAGCTGATGCGTTCTCTGGGCTGGACACACTGCGTCTCGTTCACTGAGAGCTGGCTGCCGATCCTCTTCCCGGCAGACTTCACACCCTTCTAatcatcacacacaaacacacacactcctgttTTTAACCAAGAGGAGACTTTTAATGCCTTCTGGATCATCACAATCCAAACctcatatcacacacacacacacacacatacacacatacacacatcccTCACGGACCCCATGAtgccttcagtgtgtgtgtgtgtgtgtctggctgACTCTTCATCAGGACGTGTGTTAAACACATGCAGTCTGTGGACTGACACATGATTATGAACTATTTTTCATAACAACAGTACAAGCGTAAATATATACGGCAATATGATGGAcatcgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgctcacatttcattcattattattattattttttaggtttatttttatttttatttttattttttttggtgaaatccccctcctaaaaaaaattatatttggacttaaattattttgtttaatttaaattattacctCTTTAGGTAACtgtcattatatttaaatttttcccccttttgattttttttttatgtgaattttattattttcattattttattttttcctcatttttttgtgaatttattttctattttttattttttctaggcCCTTGTGTGTGTCAAATGTATGCATGTTTCCTAAACACACGGGTCTCTTCATGTGCCGTTCTCTCATCCGTCTGCAAGTTTTTCTCTCTCTGAGCCTCGACTCATTTCCTTTTGGTCTGTGTAAAACCGAGACATTTTTCttagcgtgtttgtgtgtgtttgtgtgtgtttgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagccttcATTCAGGGTTCAGACACAGTAAACACAGAAGACTCGACGCCAGCATTCATGCTCACATTTTCAGCAGCTCCTCCAGATTCACTTTCTTCTTCTGCATTCAAGCACATCTCCTCTGTGGGTCGCCACTTTtttctattgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgttgatgtTCAGGGTGATGCGAATGGCAGGATCTTTAAAATGGCCTTAAAAATTCACaatcattaaagggacagttcacccaaaaccgaTATAAGAGATTGTTTCAGTTTCTTTTGTTCTTCTTGCAATAgcagaacattcttcaaaatatcttattttgtgtttgccagaagaaagaaatgcataaatGTTTACCACCACTTAATTCGGAcatgtttgtatgttttggcgtgtactgtctctttaaatccCGTCCGTTTCTGCACTCTTCAGGAAATCTCATATCAGTCTGTATTAAGAAACCCTTGAATATCCTCAGATATATTTATGGATGTCTTGTATTTATAAAGTACAGATGAAATCTAGTTAATGCCAATATTTTAAAGTCCTTTTAATTCATGCATAGAGTAGTTAGGTGTTCTTTTATATCCATTGCTATTGGTGGAATGTTTCAGAAATGACAGACggttattttgttaaatgtgctgatgatgatgatgatgatgatgatgtatttGAGGAAGATATGGAATAAAATGACCTGGAACTgacttaatatttgtatttaatc

Function

symbol description
tpp2 Predicted to enable tripeptidyl-peptidase activity. Predicted to act upstream of or within proteolysis. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in primary immunodeficiency disease. Orthologous to human TPP2 (tripeptidyl peptidase 2).

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0005829 cytosol cellular_component
GO:0004252 serine-type endopeptidase activity molecular_function
GO:0008240 tripeptidyl-peptidase activity molecular_function

KEGG:

id description
ko01002 Peptidases and inhibitors
ko03110 Chaperones and folding catalysts

ZFIN:

id description
ZDB-GENE-121214-290 Predicted to enable tripeptidyl-peptidase activity. Predicted to act upstream of or within proteolysis. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in primary immunodeficiency disease. Orthologous to human TPP2 (tripeptidyl peptidase 2).

Ensembl:

ensembl_id ENSDARG00000078751

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000040 True 5496 mRNA 0.50 29 418869 443759

Neighbor

gene id symbol gene type direction distance location
XLOC_000018 NA coding upstream 60307 355481 ~ 358562 (+)
XLOC_000017 cenpe coding upstream 122812 260039 ~ 296057 (+)
XLOC_000016 grk1a coding upstream 160731 245076 ~ 258138 (+)
XLOC_000015 tfdp1b coding upstream 175071 227241 ~ 243798 (+)
XLOC_000014 tmco3 coding upstream 193732 218524 ~ 225137 (+)
XLOC_000020 blzf1 coding downstream 50538 494297 ~ 505620 (+)
XLOC_000021 txnl4b coding downstream 70227 513986 ~ 518076 (+)
XLOC_000022 mrpl16 coding downstream 80629 524388 ~ 532429 (+)
XLOC_000023 mrpl39 coding downstream 89007 532766 ~ 591331 (+)
XLOC_000024 dre-mir-155 coding downstream 132685 576444 ~ 576521 (+)
XLOC_000011 NA non-coding upstream 261587 156792 ~ 157282 (+)
XLOC_000026 NA non-coding downstream 351217 794976 ~ 911551 (+)
XLOC_000028 NA non-coding downstream 572053 1015812 ~ 1033638 (+)
XLOC_000029 CR450787.2 non-coding downstream 774932 1218691 ~ 1218805 (+)
XLOC_000030 NA non-coding downstream 871530 1315289 ~ 1342237 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000299_06037407_06054548 TPP2 coding CI01000299 null 6036217 ~ 6054548 (-)