XLOC_019044


Basic Information

Item Value
gene id XLOC_019044
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 32406763 ~ 32411647 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039174
CTTTCATGATCTGCTGGAGCTCCATCTGAAGGGTTTGAATGACACGGACAGGATCTTCTCCAGCCGCTCGCTTAACGCGGTGCACATAGAGCTTCCCCTCCATCACTACAGCAACGTCATCGTCCTCCACGTAAATCACCTTGTTGGTGTGCTCAATGATGGCACTGGCATCAGAAGCAAAGTAAAACTCCACCGCCAGTCTGTCGTCAATTGAGTGCAGGGCATTAGAGCTTCCCACTCCGTTATGCAGGTTTTTCTCTTGTTCATCTCTTCTGGAATCACCGCAGTTGTACTGGACAGGAATCTGCTCTGTGGAAAGTTCATATTGACTGCGGATGCCGATGAGCAGTGGACTGCCTCTC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039174 True 362 lncRNA 0.51 3 32406763 32411647

Neighbor

gene id symbol gene type direction distance location
XLOC_019043 si:ch211-247j9.1 coding upstream 57052 32332616 ~ 32349711 (+)
XLOC_019042 NA coding upstream 307443 32078057 ~ 32099320 (+)
XLOC_019041 NA coding upstream 336620 32045424 ~ 32070143 (+)
XLOC_019040 CABZ01006935.1 coding upstream 376011 32030636 ~ 32030752 (+)
XLOC_019038 TENM2 coding upstream 397920 31434251 ~ 32008843 (+)
XLOC_019045 CR735104.1 coding downstream 52921 32464568 ~ 32527344 (+)
XLOC_019046 NA coding downstream 343767 32755414 ~ 32757958 (+)
XLOC_019047 adra2db coding downstream 408528 32820175 ~ 32821422 (+)
XLOC_019048 NA coding downstream 616254 33027901 ~ 33029631 (+)
XLOC_019049 arl3l1 coding downstream 760879 33172526 ~ 33187913 (+)
XLOC_019039 NA non-coding upstream 669365 31735189 ~ 31737398 (+)
XLOC_019021 NA non-coding upstream 2220442 30184309 ~ 30186321 (+)
XLOC_019051 NA non-coding downstream 837573 33249220 ~ 33447610 (+)
XLOC_019054 NA non-coding downstream 1052777 33464424 ~ 33465807 (+)

Expression


Co-expression Network