XLOC_019054



Basic Information


Item Value
gene id XLOC_019054
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 33464424 ~ 33465807 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00039447
ttttttttTTAAagtgcaacattcatttattcaacaatgatataaaacaatataatttcagCAACTCAACTCCAGCAACCTCTGACAATCGTCAGGTACACACACAAATTGTTCCATGATAGACATTAGAGTCTGTTGTGTCTGATTGTTCTCCTCTTTTTAGTGCAGacctatttatatatttataaaaacataattggtgagaaaaatattcatgtaaCAGAAAGAACTTGCATGCACTGACATGGGAAGAAGCACTAATGACAACAGATTCAAAGCTTTGGCCATTTTTACCATCATAATACAGGTATTCAAAAACAAGCAGCtaattttaaacagaaaataacCTAAACTAAAATGAGCAACCCAATTATTATAGTGTGAATAACACCATCCAGTTACTGTATATGGTTTGATGTTTGGCACCTTCAGATGAGGAGGTACATGTTGAAGTGTCTGAATGAGGCCGTTTTTATCTTTTCTTGAATGAGCTGAAGTAGTTTTTAATGGTGTTCTCGATGTTAGGCACTTGATAGCTCTGAG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00039447 True 543 lncRNA 0.34 2 33464424 33465807

Neighbor


gene id symbol gene type direction distance location
XLOC_019053 cd74b coding upstream 530 33459524 ~ 33463894 (+)
XLOC_019052 rps14 coding upstream 5994 33454147 ~ 33458430 (+)
XLOC_019051 NA coding upstream 16814 33249220 ~ 33447610 (+)
XLOC_019050 BX072577.1 coding upstream 251999 33187992 ~ 33212425 (+)
XLOC_019049 arl3l1 coding upstream 276511 33172526 ~ 33187913 (+)
XLOC_019055 clint1b coding downstream 38028 33503835 ~ 33550282 (+)
XLOC_019056 BX005313.2 coding downstream 171276 33637083 ~ 33646932 (+)
XLOC_019057 BX005313.1 coding downstream 290303 33756110 ~ 33765245 (+)
XLOC_019058 map4k6 coding downstream 567773 34033580 ~ 34075107 (+)
XLOC_019059 NA coding downstream 612928 34078735 ~ 34086225 (+)
XLOC_019048 NA non-coding upstream 434793 33027901 ~ 33029631 (+)
XLOC_019046 NA non-coding upstream 706466 32755414 ~ 32757958 (+)
XLOC_019045 CR735104.1 non-coding upstream 937080 32464568 ~ 32527344 (+)
XLOC_019044 NA non-coding upstream 1052777 32406763 ~ 32411647 (+)
XLOC_019066 NA non-coding downstream 1463777 34929584 ~ 34943930 (+)
XLOC_019073 BX247879.1 non-coding downstream 2056895 35522702 ~ 35522834 (+)

Expression



Co-expression Network