XLOC_019057 (BX005313.1)


Basic Information

Item Value
gene id XLOC_019057
gene name BX005313.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 33756110 ~ 33765245 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00037789
aaattgatggggtcagggaatgatatgtgtaaaaaattattttaccccatacagattggtatggttgtgccacagatttagattattaaatgttaagtcttattttactcttattatatttatctttttttgcaGCTACagcaattgatgttgaaaaactgatgctaccaatcactccttatttgattattcaagtagttcctatatttaaaaaaaatagaaaaaaatatgttaaaacaaccACGGCTAggctaaccctaaccctaacaatTGAATACAATTATGattgtgatggaactggaatgcgacaccagttactcttaagtcaagaacTGAATAAAGCACAGATTATGGAGGGATCTGCTGCtaaactaactggagggaaggaacctttagtgtgggtgaacatactaccttgatgtccaacaaaggctgcacaagagctcatttgatagcacatatTCTGTTTTGTCTACATCTTTGACAACCTGGAAGTGCTttgacatcagattatcagaagtgctcctgccctttttcactTCCAGTTTCCACATCATCATTTGGACTCCATtttgtcttgtagcagtattttcacctgtttttaaaattttaagaatttttgatgcattaattgttgactggttttaattatcaattgttcattagtgttctgttgctctgttatattgaattattgctactgttttagcatggtttacaaaataaactttcattgtgaagttaaa
>TCONS_00037790
gtgtaaaaaattattttaccccatacagattggtatggttgtgccacagatttagattattaaatgttaagtcttattttactcttattatatttatctttttttgcaGCTACagcaattgatgttgaaaaactgatgctaccaatcactccttatttgattattcaagctcagattgtgatggaactggaatgcgacaccagttactcttaagtcaagaacTGAATAAAGCACAGATTATGGAGGGATCTGCTGCtaaactaactggagggaaggaacctttagtgtgggtgaacatactaccttgatgtccaacaaaggctgcacaagagctcatttgatagcacatatTCTGTTTTGTCTACATCTTTGACAACCTGGAAGTGCTttgacatcagattatcagaagtgctcctgccctttttcactTCCAGTTTCCACATCATCATTTGGACTCCATtttgtcttgtagcagtattttcacctgtttttaaaattttaagaatttttgatgcattaattgttgactggttttaattatcaattgttcattagtgttctgttgctctgttatattgaattattgctactgttttagcatggtttacaaaataaactttcattgtgaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000091943

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00037789 False 746 processed_transcript 0.33 5 33756110 33765245
TCONS_00037790 True 629 processed_transcript 0.34 4 33756136 33765239

Neighbor

gene id symbol gene type direction distance location
XLOC_019056 BX005313.2 coding upstream 109178 33637083 ~ 33646932 (+)
XLOC_019055 clint1b coding upstream 205828 33503835 ~ 33550282 (+)
XLOC_019054 NA coding upstream 290303 33464424 ~ 33465807 (+)
XLOC_019053 cd74b coding upstream 292216 33459524 ~ 33463894 (+)
XLOC_019052 rps14 coding upstream 297680 33454147 ~ 33458430 (+)
XLOC_019058 map4k6 coding downstream 268335 34033580 ~ 34075107 (+)
XLOC_019059 NA coding downstream 313490 34078735 ~ 34086225 (+)
XLOC_019060 mtmr1b coding downstream 322865 34088110 ~ 34118530 (+)
XLOC_019061 hmgb3b coding downstream 354514 34119759 ~ 34129776 (+)
XLOC_019062 trpc5b coding downstream 367502 34132747 ~ 34211658 (+)
XLOC_019051 NA non-coding upstream 308500 33249220 ~ 33447610 (+)
XLOC_019048 NA non-coding upstream 726479 33027901 ~ 33029631 (+)
XLOC_019046 NA non-coding upstream 998152 32755414 ~ 32757958 (+)
XLOC_019066 NA non-coding downstream 1164339 34929584 ~ 34943930 (+)
XLOC_019073 BX247879.1 non-coding downstream 1757457 35522702 ~ 35522834 (+)
XLOC_019074 NA non-coding downstream 2132353 35897598 ~ 35899398 (+)
XLOC_019075 NA non-coding downstream 2135672 35900917 ~ 35905585 (+)

Expression


Co-expression Network