XLOC_019180 (sept8a)


Basic Information

Item Value
gene id XLOC_019180
gene name sept8a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 43328685 ~ 43374893 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00037962
TTCGCCATAGTAACGTTCGTAAATTCTCCAGCCACAGTGagcgagtgtgtgtatgtgtggacgGTGAGTGAAACGAAGGCAGCTCCCTTTCGCcttataaaaacacatacattcctCATCATGGCGGCCACGGATGTAGACATATTTTCTAATGAAGAAAAGCGTAACCTCAGCCTCGGCGGTCATGTTGGCTTTGACAGTCTGCCCGATCAGCTGGTCAGTAAATCGGTGACTCAGGGTTTCTGCTTCAACATCCTCTGTGTGGGTGAGACGGGCATCGGCAAGTCTACATTAATGAACACGCTTTTTAACACCATGTTTGAAAACGAGGAGGCCAGCCATTACCAAAACGGCGTCTACCTGCGGCCCAGAACGTACGACTTGCAAGAGAGCAACGTCCACCTGAAGCTGACTATCGTCGACACAGTGGGCTTTGGGGACCAAATCAACAAAGAAGAAAGCTATAAACCCATTGTGGACTATATCGACACACAGTTTGAAAACTACCTGCAGGAAGAGCTGAAAATAAAGCGTTCTCTCTTCAACTACCACGACACCAGAATCCACATCTGCCTCTACTTCATCTCTCCGACGGGACACTCGCTCAAATCCCTGGATTTAGTCACTATGAAGAAGCTGGACAGCAAGGTGAACATCATACCCATTATCGCCAAAGCTGACACGATTTCCAAGAGCGAGCTGCACAAGTTCAAGATCAAGATCATGAGCGAGCTGGTCAGCAACGGCGTTCAGATCTACCAGTTTCCCACAGACGATGAAGCCGTCACAGAAATCAACTCCTCTATGAACGCCCATCTACCGTTTGCTGTGGTGGGGAGTGTTGAGGAGGTGAAGGTGGGCAATAAGACAGTGAGGGCCAGGCAGTACCCATGGGGCGTCGTTCAAGTGGAGAACGAGAGTCACTGTGATTTCGTGAAGCTGAGGGAGATGTTGATCCGGGTGAACATGGAAGATCTGAGAGAGCAGACTCACGCCAGACACTACGAGCTCTACAGGCGCTGTAAACTGGAGGAAATGGGCTTCAAAGACACCGACCCTGACAGCCAGCCCTTCAGTCTGCAGGAGACGTATGAAGCCAAGAGGAAGGAGTTTCTCGGAGACCTgcagaagaaggaggaggagatgAGGCAGATGTTCGTCAATAAAGTGAAGGAGACGGAGGCCGAGCTGAAGGAGAAGGAGAGAGAgTTACATGAGAAGTTCGAGCAGCTGAAGCGAATGCACCAGGAGGAGAAGAGGAAAGTGGAGGAGAAGAGACGCGAGCTGGAGGAGGAGATGAACGCTTTCAATAGGAGGAAAGTGGCCGCCGAGACCCTCTCGCTCTCACAGCCCCTCAAGAAGGACAAGGACAAGAAAAAttAATTTATGAGCACATCGCAGGCCATCCATGGACTTTCCTTCATTACATTTGCAGCGTCGCCTTttgatttgtttagtttttttgacaTGTTCCTTGTGTTAAAGGACCAAAAGCTCCTGATTGGACGGCAGAGAGGTGCATTATGGGGACTGAACAGATTCCTGTGTTGTATTTTTGTCTCTTGTTTTCCTTCATGTGTGTTTCTGGTGTGGATGAAGGTCATTTTTAACATCCCTCATCAGCTGTGTTATTTTACTCTTATGTTTCCGagcgcgagtgtgtgtgttttcttttataGCACACCGTGTGTTTTGGTACTAAACCATCTGCTCATTCGTCTCgctgtcagtttttttttgtgacGCGTGTATTGAGAAGTGCACGTTTCCCTTGCCAATGTACAGTAGTATTTAAGATCTGAGCCAAACTCATGATTACAGCGCAGTGATGATTTTATTATTACACCAGCCTGGCCGAATAAAGCTATTTTTGATGCTGTTTTTAAGAGCACACGACAACAGATATGCAAatgatatctatttttttgtaTCGCGAGGTGTATAAGGCTGTATTCAGGTTATATTGTTTCACATTTAAAGCCATAGCCGATGCTGAAATAAACACTCCCCCATTTACATCA
>TCONS_00037963
AATTCTCCAGCCACAGTGagcgagtgtgtgtatgtgtggacgAATGAAGAAAAGCGTAACCTCAGCCTCGGCGGTCATGTTGGCTTTGACAGTCTGCCCGATCAGCTGGTCAGTAAATCGGTGACTCAGGGTTTCTGCTTCAACATCCTCTGTGTGGGTGAGACGGGCATCGGCAAGTCTACATTAATGAACACGCTTTTTAACACCATGTTTGAAAACGAGGAGGCCAGCCATTACCAAAACGGCGTCTACCTGCGGCCCAGAACGTACGACTTGCAAGAGAGCAACGTCCACCTGAAGCTGACTATCGTCGACACAGTGGGCTTTGGGGACCAAATCAACAAAGAAGAAAGCTATAAACCCATTGTGGACTATATCGACACACAGTTTGAAAACTACCTGCAGGAAGAGCTGAAAATAAAGCGTTCTCTCTTCAACTACCACGACACCAGAATCCACATCTGCCTCTACTTCATCTCTCCGACGGGACACTCGCTCAAATCCCTGGATTTAGTCACTATGAAGAAGCTGGACAGCAAGGTGAACATCATACCCATTATCGCCAAAGCTGACACGATTTCCAAGAGCGAGCTGCACAAGTTCAAGATCAAGATCATGAGCGAGCTGGTCAGCAACGGCGTTCAGATCTACCAGTTTCCCACAGACGATGAAGCCGTCACAGAAATCAACTCCTCTATGAACGCCCATCTACCGTTTGCTGTGGTGGGGAGTGTTGAGGAGGTGAAGGTGGGCAAT

Function

symbol description
sept8a Predicted to enable GTPase activity and molecular adaptor activity. Predicted to be involved in cellular protein localization and cytoskeleton-dependent cytokinesis. Predicted to be part of septin complex. Predicted to be active in cell division site; microtubule cytoskeleton; and septin ring. Is expressed in anterior lateral line nerve; brain; and medial longitudinal fasciculus. Orthologous to human SEPTIN8 (septin 8).

GO:

id name namespace
GO:0034613 cellular protein localization biological_process
GO:0061640 cytoskeleton-dependent cytokinesis biological_process
GO:0032153 cell division site cellular_component
GO:0015630 microtubule cytoskeleton cellular_component
GO:0031105 septin complex cellular_component
GO:0005940 septin ring cellular_component
GO:0060090 molecular adaptor activity molecular_function
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-309 Predicted to enable GTPase activity and molecular adaptor activity. Predicted to be involved in cellular protein localization and cytoskeleton-dependent cytokinesis. Predicted to be part of septin complex. Predicted to be active in cell division site; microtubule cytoskeleton; and septin ring. Is expressed in anterior lateral line nerve; brain; and medial longitudinal fasciculus. Orthologous to human SEPTIN8 (septin 8).

Ensembl:

ensembl_id ENSDARG00000032606

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00037962 False 2021 mRNA 0.47 10 43328685 43374893
TCONS_00037963 True 756 mRNA 0.49 6 43328706 43363984

Neighbor

gene id symbol gene type direction distance location
XLOC_019179 shroom1 coding upstream 18197 43253538 ~ 43310488 (+)
XLOC_019178 FP085421.1 coding upstream 55974 43193623 ~ 43272711 (+)
XLOC_019177 aff4 coding upstream 81812 43178817 ~ 43246873 (+)
XLOC_019176 zcchc10 coding upstream 151446 43171013 ~ 43177239 (+)
XLOC_019175 NA coding upstream 194250 43132219 ~ 43134435 (+)
XLOC_019181 NA coding downstream 1340 43376233 ~ 43380146 (+)
XLOC_019182 frmd7 coding downstream 25458 43400351 ~ 43416128 (+)
XLOC_019183 atg4a coding downstream 110619 43485512 ~ 43510481 (+)
XLOC_019184 NA coding downstream 139138 43514031 ~ 43515964 (+)
XLOC_019185 gpr185a coding downstream 184230 43559123 ~ 43562630 (+)
XLOC_019174 CU459082.1 non-coding upstream 269320 43059248 ~ 43059365 (+)
XLOC_019173 CU462980.1 non-coding upstream 343044 42891618 ~ 42985641 (+)
XLOC_019172 NA non-coding upstream 441318 42877788 ~ 42887367 (+)
XLOC_019171 CABZ01024683.1 non-coding upstream 487614 42840956 ~ 42841071 (+)
XLOC_019186 NA non-coding downstream 192059 43566952 ~ 43575215 (+)
XLOC_019187 NA non-coding downstream 270980 43645873 ~ 43647249 (+)
XLOC_019190 CR792441.5 non-coding downstream 330715 43705608 ~ 43705684 (+)

Expression


Co-expression Network