Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110529632 |
| gene name | dph5 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 15192649 ~ 15241166 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| dph5 | Predicted to enable diphthine synthase activity. Predicted to act upstream of or within methylation and peptidyl-diphthamide biosynthetic process from peptidyl-histidine. Orthologous to human DPH5 (diphthamide biosynthesis 5). |
| description |
|---|
| PREDICTED: diphthine methyl ester synthase |
| id | name | namespace |
|---|---|---|
| GO:0017183 | peptidyl-diphthamide biosynthetic process from peptidyl-histidine | biological_process |
| GO:0004164 | diphthine synthase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110529632 | False | 739 | mRNA | 0.43 | 7 | 15192649 | 15241166 |
| TU16335 | True | 821 | lncRNA | 0.39 | 1 | 15237388 | 15238208 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488261 | antithrombin | coding | upstream | 21234 | 15163316 ~ 15171415 (+) |
| LOC110488062 | LOC106613585 | coding | upstream | 33177 | 15130526 ~ 15159472 (+) |
| LOC110529430 | LOC106574078 | coding | upstream | 66647 | 15117850 ~ 15126002 (+) |
| LOC110487930 | LOC106574072 | coding | upstream | 112345 | 15075184 ~ 15080304 (+) |
| elav1 | elav1 | coding | upstream | 166114 | 15024419 ~ 15026535 (+) |
| LOC110489303 | dbt | coding | downstream | 183956 | 15425122 ~ 15432764 (+) |
| LOC118966767 | NA | coding | downstream | 190343 | 15431509 ~ 15431641 (+) |
| lrrc39 | lrrc39 | coding | downstream | 191923 | 15433089 ~ 15437025 (+) |
| sass6 | sass6 | coding | downstream | 206292 | 15447458 ~ 15468011 (+) |
| LOC110489630 | LOC106573979 | coding | downstream | 267596 | 15508762 ~ 15521789 (+) |
| G13740 | NA | non-coding | upstream | 17889 | 15100294 ~ 15174760 (+) |
| G13774 | NA | non-coding | upstream | 92462 | 15099934 ~ 15100187 (+) |
| G13772 | NA | non-coding | upstream | 94964 | 15097473 ~ 15097685 (+) |
| G13769 | NA | non-coding | upstream | 97473 | 15094962 ~ 15095176 (+) |
| G13768 | NA | non-coding | upstream | 98249 | 15094122 ~ 15094400 (+) |
| G13835 | NA | non-coding | downstream | 425 | 15241591 ~ 15242242 (+) |
| G13856 | slc30a7 | non-coding | downstream | 28004 | 15269170 ~ 15272921 (+) |
| G13863 | NA | non-coding | downstream | 39996 | 15281162 ~ 15281420 (+) |
| G13865 | NA | non-coding | downstream | 41493 | 15282659 ~ 15282863 (+) |
| G13890 | NA | non-coding | downstream | 76146 | 15317312 ~ 15323968 (+) |
| G13639 | NA | other | upstream | 230646 | 14961554 ~ 14962003 (+) |
| G13434 | NA | other | upstream | 380025 | 14811771 ~ 14812624 (+) |
| G13391 | NA | other | upstream | 491919 | 14700176 ~ 14700730 (+) |
| G13381 | NA | other | upstream | 512622 | 14679698 ~ 14680027 (+) |
| G13380 | NA | other | upstream | 513071 | 14679350 ~ 14679578 (+) |
| LOC110490510 | LOC106573976 | other | downstream | 453875 | 15694810 ~ 15716774 (+) |
| LOC118941201 | NA | other | downstream | 1337920 | 16578956 ~ 16592967 (+) |
| LOC110492606 | LOC106573909 | other | downstream | 1675333 | 16916482 ~ 16920945 (+) |
| LOC110492876 | LOC106613263 | other | downstream | 1721891 | 16962997 ~ 16967790 (+) |
| G13827 | NA | non-coding | upstream | 5873 | 15230998 ~ 15231515 (+) |
| G13823 | NA | non-coding | upstream | 8509 | 15228631 ~ 15228879 (+) |
| G13820 | NA | non-coding | upstream | 11451 | 15225727 ~ 15225937 (+) |
| G13807 | NA | non-coding | upstream | 38934 | 15198132 ~ 15198454 (+) |
| G13806 | NA | non-coding | upstream | 39548 | 15197564 ~ 15197840 (+) |
| G13833 | NA | non-coding | downstream | 364 | 15238572 ~ 15239615 (+) |
