G13807


Basic Information

Item Value
gene id G13807
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 15198132 ~ 15198454 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU16310
ttgagatccgggctcttcgctggccatggcagaacactgacattcctgtcttgcaggaaatcacacacaggacgagcagtatggttggtggcattgtcatgctggagggtcaagtcaggatgagcctgcaggaagggtaccacatgagggaggaggatatcttccctgtaacgcacaacgttgagattgcctgcaatgacaacaagctcagtccgatgatgctgtgacacaccgccccagaccatgacggaccctccaactcCGAATCGATCCTGCTCTAGAGCAGTGTGTAtcactcattccttcaacgataaactcGAATC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU16310 True 323 lncRNA 0.53 1 15198132 15198454

Neighbor

gene id symbol gene type direction distance location
LOC110488261 antithrombin coding upstream 26717 15163316 ~ 15171415 (+)
LOC110488062 LOC106613585 coding upstream 38660 15130526 ~ 15159472 (+)
LOC110529430 LOC106574078 coding upstream 72130 15117850 ~ 15126002 (+)
LOC110487930 LOC106574072 coding upstream 117828 15075184 ~ 15080304 (+)
elav1 elav1 coding upstream 171597 15024419 ~ 15026535 (+)
LOC110489303 dbt coding downstream 226668 15425122 ~ 15432764 (+)
LOC118966767 NA coding downstream 233055 15431509 ~ 15431641 (+)
lrrc39 lrrc39 coding downstream 234635 15433089 ~ 15437025 (+)
sass6 sass6 coding downstream 249004 15447458 ~ 15468011 (+)
LOC110489630 LOC106573979 coding downstream 310308 15508762 ~ 15521789 (+)
G13806 NA non-coding upstream 292 15197564 ~ 15197840 (+)
G13740 NA non-coding upstream 23372 15100294 ~ 15174760 (+)
G13774 NA non-coding upstream 97945 15099934 ~ 15100187 (+)
G13772 NA non-coding upstream 100447 15097473 ~ 15097685 (+)
G13769 NA non-coding upstream 102956 15094962 ~ 15095176 (+)
G13820 NA non-coding downstream 27273 15225727 ~ 15225937 (+)
G13823 NA non-coding downstream 30177 15228631 ~ 15228879 (+)
G13827 NA non-coding downstream 32544 15230998 ~ 15231515 (+)
LOC110529632 dph5 non-coding downstream 38934 15192649 ~ 15241166 (+)
G13833 NA non-coding downstream 40118 15238572 ~ 15239615 (+)
G13639 NA other upstream 236129 14961554 ~ 14962003 (+)
G13434 NA other upstream 385508 14811771 ~ 14812624 (+)
G13391 NA other upstream 497402 14700176 ~ 14700730 (+)
G13381 NA other upstream 518105 14679698 ~ 14680027 (+)
G13380 NA other upstream 518554 14679350 ~ 14679578 (+)
LOC110490510 LOC106573976 other downstream 496587 15694810 ~ 15716774 (+)
LOC118941201 NA other downstream 1380632 16578956 ~ 16592967 (+)
LOC110492606 LOC106573909 other downstream 1718045 16916482 ~ 16920945 (+)
LOC110492876 LOC106613263 other downstream 1764603 16962997 ~ 16967790 (+)

Expression


Co-expression Network