Gene
RNA
| Item | Value |
|---|---|
| gene id | odf3b |
| gene name | odf3b |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 35286541 ~ 35287452 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| odf3b | Predicted to be located in cytoplasm. Predicted to be active in cytoskeleton. Is expressed in peripheral olfactory organ; pronephros; and testis. Orthologous to human ODF3 (outer dense fiber of sperm tails 3) and ODF3B (outer dense fiber of sperm tails 3B). |
| description |
|---|
| PREDICTED: outer dense fiber protein 3B |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036989454.1 | True | 411 | mRNA | 0.57 | 5 | 35286541 | 35287452 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521966 | rabl2a | coding | downstream | 724 | 35281285 ~ 35285817 (-) |
| LOC118947385 | NA | coding | downstream | 418246 | 34856461 ~ 34868295 (-) |
| zp2.3 | zp2.3 | coding | downstream | 595582 | 34686750 ~ 34690959 (-) |
| LOC110521923 | LOC106573414 | coding | downstream | 622070 | 34659087 ~ 34664471 (-) |
| cpt1 | cpt1 | coding | downstream | 626388 | 34647385 ~ 34660153 (-) |
| LOC110520384 | LOC106573404 | coding | upstream | 26501 | 35313953 ~ 35316192 (-) |
| LOC110532260 | NA | coding | upstream | 147343 | 35433794 ~ 35694776 (-) |
| LOC110522006 | LOC106573384 | coding | upstream | 455198 | 35742650 ~ 35749599 (-) |
| LOC110521997 | LOC100196677 | coding | upstream | 462853 | 35750305 ~ 35753348 (-) |
| LOC110522154 | LOC105022174 | coding | upstream | 605055 | 35892507 ~ 35914512 (-) |
| G37196 | NA | non-coding | downstream | 175246 | 35110630 ~ 35111295 (-) |
| G37184 | NA | non-coding | downstream | 195166 | 35091116 ~ 35091375 (-) |
| G37181 | NA | non-coding | downstream | 201315 | 35084985 ~ 35085226 (-) |
| G37180 | NA | non-coding | downstream | 201621 | 35084576 ~ 35084920 (-) |
| G37178 | NA | non-coding | downstream | 203566 | 35082632 ~ 35082975 (-) |
| G37322 | NA | non-coding | upstream | 11881 | 35299333 ~ 35299619 (-) |
| G37323 | NA | non-coding | upstream | 12726 | 35300178 ~ 35300431 (-) |
| G37329 | NA | non-coding | upstream | 25367 | 35312819 ~ 35313055 (-) |
| G37901 | NA | non-coding | upstream | 136788 | 35424240 ~ 35424504 (-) |
| G37310 | LOC106573403 | other | downstream | 8536 | 35273709 ~ 35278005 (-) |
| G36196 | NA | other | downstream | 905309 | 34341562 ~ 34381232 (-) |
| G36141 | NA | other | downstream | 923805 | 34277700 ~ 34362736 (-) |
| G35628 | NA | other | downstream | 1418496 | 33867558 ~ 33868045 (-) |
| G35299 | NA | other | downstream | 1834128 | 33442368 ~ 33452413 (-) |
| G37907 | NA | other | upstream | 153466 | 35440918 ~ 35441328 (-) |
| G37976 | NA | other | upstream | 295840 | 35583292 ~ 35583608 (-) |
| G38045 | LOC106573386 | other | upstream | 433988 | 35721440 ~ 35722056 (-) |
| LOC110522187 | LOC106573361 | other | upstream | 1082642 | 36370091 ~ 36409064 (-) |
| G38855 | NA | other | upstream | 1221086 | 36508538 ~ 36510829 (-) |
