G38855


Basic Information

Item Value
gene id G38855
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 36508538 ~ 36510829 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU43930
cattattaggagccatcctcccctcagcagcatccACTGTAGCATATGTGGTAATCTGGATAATAATAATGACAGACAGTAGTTATAAAGACAAACAGGGGTTAAATAGAATATGTGGTGGtgacattaaagggatagttcacccaaatcacaaaattacatattggtttccaTACCCTGTAAGCAGTATAGACAATGCATGACAACAATCCATGCTTTGGATTAGTGTTCCTGGCACTGTTTCCTGTAATTttataatttgggtgaactatccctttaactgaACAGCGAACAACTCCTTGGCCCTGCTGTCCCTTGTTTTATCTCCATGACGATTCTCTGGATGTCACGACTGCAAGACACACAAAAATAAGTGGGGATGATGTCTCCATTCATTTGGTTTGGTTAGGAAAACACTTTTCTCGAAACCAATTTTCTTTTTAAGGCGGAAGGAGAGCTTGCTAGATAGAGACAGTAAAGCATGCCCTGGTAGTGGGTAGAAGTTGGCCCTAACCATTGATTCAGAGTCTGATTCTGAGTTATTTAGCCACCTAATGGATTGGGTCATAGGgacaactgatcctagatctgtgatgAGGGGCAACTTCTACCTCAAGCATGCTACATCTATTTCCCCAATAAAGCCAGAGAAACAGTCCAAATACCTCAGcaacctggagggaggagggagagcgcgcacacacacacacacacacacacaccgtggaaACCCATTCCAACCAGTTAGGAGGAAACCCAACATCCCACATACAGGGCCATGGCCCTGTTTCAGTACTTCTGAAATGCATTGTTCCATTCTCTGTCCTTAGAAGTAATCACTCATCTGAAATATCATGGAGACGCTTACTTTACACTATCCAATCAAGTTGGATCAGAGATTACGTCacggaagggaggaaggaaggatgcaTGTTTAAAGTATTCATACAGGGCCCATGACCTCACACGGGAGAGAATGGACTGTGCAATACACCTTACAGAGTTCTGAggtcaggctctctctctctctctggaagtcAAAGGTCACCAACATACAAGACATTGTGGAAGTAATCTCCCAAACAGAAACATAAAGGCCTCTCTGACACAAtaatcaaaaatatatattttacactaCAGCCCGATTGGTCAGTCGTTGAGCCTCTTTTATCAATTGTAAAGCAGCAAAAATGTGTatttgaatgtatttaaattaggCTCACTCTTTTATACAGAAATAGAGTGGtgacagtgtaacagtgtggttgTGTTGAAACACAGCTGTCCGTAGAGAATAAGCCTGTTGTTCTGAGGGTGGAGAGACACCCTGCATCGCTGGACTGACTGGGGCAGGGGACACAGCGACATACTGTGGGGAATCATGAAGCACTCACAGCTGCACCACCGGTCTGGATGTTACAGCACAGCTGGAGTGGAGGGAGCAGCAGGAGGCAGAGCTACTGGTAGTCCACAacatgcacaacacacagagagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacacagctagAGAGAATggtgatcgagagagagagagacagaagtaagggaaagagagagcggttGGGAcgaaacagaaagagaagagggaggggagatgtGCAACTGAGTAAGATGTTAGCAAAGCAGAGTTGAATACCATGATTGTAGACGGACCAATTTAACAGATAACCAGAATGATCAGGGAATCAGATAGCATTAGAGGCGTAAAGGGGCAGTCAGAGGACAGAAGAAGGTCGTTAAGGGAAACCTTCAGGGGCAGGGAGTGGGTTGGGGGCTCCATGCAGGGACCTCCACCCTTAGTAACAGAAAAGAGGGGTGTGGCCGCCAGGCATGGCCCAAAAAATCAAGCCGAGGCAGGGGGGCAGAGCGGAGTGAGACAGGGCGGGGTAGTGGCAGGTAGAgtgtcacacatacacaccctcaGGGTTGAGGCTGGACACCAGCGGGTTCTGCAGGTTGCGGGGGTGTCCCAGGAACTGCTTGGCTGTGGGGCGGGGAGGCGACTCTGAGGGGAGCAAGCTCAGG

Function

NR:

description
PREDICTED: ras association domain-containing protein 8-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU43930 True 2094 TUCP 0.44 2 36508538 36510829

Neighbor

gene id symbol gene type direction distance location
LOC110522187 LOC106573361 coding downstream 99474 36370091 ~ 36409064 (-)
LOC110522167 LOC106573363 coding downstream 186261 36290706 ~ 36322277 (-)
LOC110522087 NA coding downstream 244432 36261188 ~ 36264106 (-)
LOC110522124 fbxl14 coding downstream 274230 36231487 ~ 36234308 (-)
LOC110522050 LOC106573365 coding downstream 318832 36141051 ~ 36189706 (-)
LOC100750228 irf-7 coding upstream 28968 36539797 ~ 36550002 (-)
LOC118966750 NA coding upstream 130226 36641055 ~ 36641109 (-)
ldlrad3 LOC106573355 coding upstream 202035 36712864 ~ 36827281 (-)
trim44 LOC106573354 coding upstream 373643 36884472 ~ 36952971 (-)
LOC110522309 LOC106573353 coding upstream 518056 37028885 ~ 37031653 (-)
G38875 NA non-coding downstream 6091 36494119 ~ 36502447 (-)
G38881 NA non-coding downstream 9338 36498720 ~ 36499200 (-)
G38374 NA non-coding downstream 145190 36363147 ~ 36363348 (-)
G38372 NA non-coding downstream 145444 36362820 ~ 36363094 (-)
G38370 NA non-coding downstream 146123 36362214 ~ 36362415 (-)
G38917 NA non-coding upstream 64212 36575041 ~ 36576178 (-)
G38992 NA non-coding upstream 193695 36704524 ~ 36710705 (-)
G39030 NA non-coding upstream 251404 36762233 ~ 36789206 (-)
G39158 NA non-coding upstream 459619 36970448 ~ 36970664 (-)
G38045 LOC106573386 other downstream 786482 35721440 ~ 35722056 (-)
G37976 NA other downstream 924930 35583292 ~ 35583608 (-)
G37907 NA other downstream 1067210 35440918 ~ 35441328 (-)
G37310 LOC106573403 other downstream 1230533 35273709 ~ 35278005 (-)
G40079 NA other upstream 1205711 37716540 ~ 37717033 (-)
G40732 NA other upstream 1614451 38125280 ~ 38125725 (-)
G40768 LOC106573348 other upstream 1676659 38187488 ~ 38191736 (-)
G41868 NA other upstream 2510976 39021805 ~ 39022025 (-)
tspan9a LOC106573177 other upstream 6527899 42852829 ~ 43129052 (-)

Expression


Co-expression Network