Gene
RNA
| Item | Value |
|---|---|
| gene id | G38881 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 36498720 ~ 36499200 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106570432 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU43958 | False | 336 | lncRNA | 0.42 | 3 | 36498720 | 36499200 |
| TU43959 | True | 307 | lncRNA | 0.42 | 2 | 36498720 | 36499200 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522187 | LOC106573361 | coding | downstream | 89656 | 36370091 ~ 36409064 (-) |
| LOC110522167 | LOC106573363 | coding | downstream | 176443 | 36290706 ~ 36322277 (-) |
| LOC110522087 | NA | coding | downstream | 234614 | 36261188 ~ 36264106 (-) |
| LOC110522124 | fbxl14 | coding | downstream | 264412 | 36231487 ~ 36234308 (-) |
| LOC110522050 | LOC106573365 | coding | downstream | 309014 | 36141051 ~ 36189706 (-) |
| LOC100750228 | irf-7 | coding | upstream | 40597 | 36539797 ~ 36550002 (-) |
| LOC118966750 | NA | coding | upstream | 141855 | 36641055 ~ 36641109 (-) |
| ldlrad3 | LOC106573355 | coding | upstream | 213664 | 36712864 ~ 36827281 (-) |
| trim44 | LOC106573354 | coding | upstream | 385272 | 36884472 ~ 36952971 (-) |
| LOC110522309 | LOC106573353 | coding | upstream | 529685 | 37028885 ~ 37031653 (-) |
| G38374 | NA | non-coding | downstream | 135372 | 36363147 ~ 36363348 (-) |
| G38372 | NA | non-coding | downstream | 135626 | 36362820 ~ 36363094 (-) |
| G38370 | NA | non-coding | downstream | 136305 | 36362214 ~ 36362415 (-) |
| G38369 | NA | non-coding | downstream | 136764 | 36361686 ~ 36361956 (-) |
| G38345 | NA | non-coding | downstream | 165718 | 36332159 ~ 36333002 (-) |
| G38917 | NA | non-coding | upstream | 75841 | 36575041 ~ 36576178 (-) |
| G38992 | NA | non-coding | upstream | 205324 | 36704524 ~ 36710705 (-) |
| G39030 | NA | non-coding | upstream | 263033 | 36762233 ~ 36789206 (-) |
| G39158 | NA | non-coding | upstream | 471248 | 36970448 ~ 36970664 (-) |
| G38045 | LOC106573386 | other | downstream | 776664 | 35721440 ~ 35722056 (-) |
| G37976 | NA | other | downstream | 915112 | 35583292 ~ 35583608 (-) |
| G37907 | NA | other | downstream | 1057392 | 35440918 ~ 35441328 (-) |
| G37310 | LOC106573403 | other | downstream | 1220715 | 35273709 ~ 35278005 (-) |
| G38855 | NA | other | upstream | 9338 | 36508538 ~ 36510829 (-) |
| G40079 | NA | other | upstream | 1217340 | 37716540 ~ 37717033 (-) |
| G40732 | NA | other | upstream | 1626080 | 38125280 ~ 38125725 (-) |
| G40768 | LOC106573348 | other | upstream | 1688288 | 38187488 ~ 38191736 (-) |
| G41868 | NA | other | upstream | 2522605 | 39021805 ~ 39022025 (-) |
