mmrn2a (mmrn2)


Basic Information

Item Value
gene id mmrn2a
gene name mmrn2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 67705791 ~ 67724360 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609153.2
AAATAGCAGTCCCGGAGAGGCCTCAGATGCTTTTGGCAGCTAGCTAGCGTGGATAGATCAGGACCAGGCAGGGAAGCAGACATGACAGCCGTGGGGGAACTGATGCTGCTGGTGCTGGGGCTGATGGTGACGGCCCACTGTGAGGTCAGGGCTAGAGACcctgaggtggaggaagaggaccaAGGTTTGCCTGtggagagaggaggctgggaTACCCAGGGGGTGGGTGTCCACCCTGGACCTGGGAAGTTTGACATCCCCCACATGAGGAATGGACCCCATGGCCGCAGACCTGACATCCCTGGCTCTGCCCACCACCCCGTAAGGCACGGACCACATGGGCAACCCCATCAGGCTGGTCCTGGACAACACCCCCTGGGTCTGCTGCCCAAGGAGACTGCACCAGCaccaggagagggagggagctacCCAGCCCGCACCGGAAACTGGTGTGCATTCGTGCACCGCCGCATTGAATCCATTGTTGAATCCTGTGGCACAGAAAAATACACCATCAAGTCCCAGAGCCCCTGTCCCAATGGCACGCCTGACTGCCAGCTCGTCATGTACAAGCTCTCTACCCGGCCAGTGTACAGAGAGAAGCAAAAGATCTTCACAGCCCTGTTGTGGAGGTGCTGCCCAGGACACGGAGGGGAGAACTGTGAGGAAACAGTGTCTGACCCTGCGGACCCTACGGTGGCAGGACGACCACATTCCGGAGACACTGAGCCTCACCACACAGGTGCACAGTCTAGACTCACCCACCAGGCTGAGAGGGAGCAGAATGACTTCCAGGTGTCTGAGAATCCTCTGCACGAACTCCATGCCTCAGAggctgacaacaacaacaaacacacagagtCCCGAGAGTCCCCCTCATACCCTCGACAGGCCCAGGAGCACATCCCTCACCATGGCTACGACCACCCCCACAACCCTAACCACCACCAGCGGGATTTCAACCATGGAGATCCAATCAGGGATGAGGTGGAAGCTGTCCCTCTACTGCCCTACCAAGACTCCCagtctcccctccctctgctccacaTGATGGCCCTGCTAATGTCCCAGCTCCAGCCCATGTTGGATGGCTTCAACCGCACCTTGGAGCACCTAACCCAGGAGGTTGAAGGTCTGTCCCGGGATGTGGCTCTGCTCCAGAACTCTCAGTGGGAGGTAGAGGAGGCAGCCCTGCGCGGAGCAGGGGCTGGAGAGGGTCCCGAGGCCTTGGAGGTTAAGCTGGAGCAGAGTTTCCAAGACACCAAGGAGGTGAGGAGGgaactggagagacagagagctgagatGGCAGACAGGCTACACTCCCAGCATGCCATGCTGCACTATAACATCACCAATTTCAAGACAGACATTGATGGCAAGATCAAACGCAACCACAAGATGTTACAGGTTAATCTCCAGTCCATGAATGCCACCCTGTCAGACATGAAGCTGGAGCAGGACCGTCTGAGTGAAGTGCTCCAGAGGCACCTGACCAACCCAGGGGCCAGGAGAGAACCCAGCCAGGTCCATCCCAGTCAGGTCCAGCAGCCTCCAAAGGACTCAGCAGTGTGGGAGGCTATCGCCCGTCTGGACAACAAGGTGGTCAACAACACAGTGAGGGTAAATGCCCTGGTGGAAGACCTTGAGATGGCCAATGACAACGTCCTGGACCTGAAGAGGGGCTTCCGAGACCTTGAGGAGAACATTGCCCAGACGGGGAGGAACAGCCAGATCCAGTTCATGGAGACGGGCCTGGAGGTGGAAGCAGCTAAAGTAGCCGTGCTGAACCGTGTCAATGAACTGGCCAGCAACCTGACCATCCACTCAGAGCAGCTGCAGGAGATGGAGACTGACATGGACTACCTGTACACACAATTCTACCAGAACGTCAGCGCTGCCGGAGACTGTGACTGCAAGGCATTCACCGCCTCCTTCTCCCGTCTGGAGCAGGGCCTGACCAACGTCACCGAGCTGGCCAACGACAATCGGCTGGCCCTGGATGGAAGCACCGATGCTGGGTCGGAGCACTGGGGTCCCTCTGTGGACGACGTCATGGCCTCCCTGGCCTTCGAGCAAGAGAAGAGCAGAACTCTCCAACACAACCTGACTCAGCTGATGACCTCAGTCCTGGGCAGCCACAGGGACGTGCTCAGCCTGCAGGAGAGCGACAAGAGGTTGGAGGCTGAGATGCGCCACCTCTCCAGCTCCTTTTACTCTTTGTTGAAGGACGCCATCCGCCACACTGAAGTGCTGGAGATGCTCCTGGGGGAGGAGGTGATGGGGTTCATGGACTGGCCCCTCCACAAACAGGAGGCTCACTCCATCCCCGCGCTGCAGAAGAGGCTCCAGCACATGCAGCACCAGATCAGGGGCCAGAACCTCAGCCTCACCACCCTGCTGGACGCTGCCCGGGCAGAGGAAGTCCCATCCTCAGACGAGCCCTCCGTGCTAGTAGACTTGGCCTCCCGCGGGctgaagaggaggagtggagaccaGAGGAGTGACCACCTCATGGACTCAGCAGCCTCTGAGGACCGGCAAGACTACTCGGACAGTGACCTGCAGAGCCTTGAGAAAGCAGTGGAGGAGCTGGGGGAGAAGGTCAACAGGCTGGAGTACAGGCCTTGCCCTGCCAGCTGCAACATCACCAAAGACAGCACCTCTGGTGGTGTGGAGGCCAAAATGCAGGTGGAGGTGGCCTGGCTGAGGAAGGGTCTAGAGAATCATCTGCGGCTCTTTAAGAATGTCTTCAGTAACTCAGAGGGGCTGGCCGAATCAGAGAGCACCCTGGACCTGGACCAGCTGTGGGCCCTGATgaagaggaaggaaaggaagagagagaggaagcgcaAGGACAAGAAAGAGGGGATAAAAGATCATATTGGAGAGCGTGCTAACCTTCGCAGCAGGAGGGATACATCAGTTCTATCCAAGCTGAGGGACAGTCCCCTGATGTTTCTGGCCAGAAGCATACAGCGCAGCAGACCAAGTGACAGCCTGCTGGTGTCGGGGGACACATCCCTAAACCTCGGCCAGATGTACTCCACTCACACTGGGATGTTCCAAGCACCTTTAGCAGGGGTCTACCTCTTCGTGCTGACATTGAACTTTGAACCTGGTCCCTCGCTATCTgggctgaggagagagaatggggagctGGCTGCCACTCTGCATCAGGACAAGATGGCATCGTATGGCCCCGTCACCCGCGTGTGTCTCCTACAGCTGCGGCAAGGAGAGGAGCTCCGCCTCGAACTGTTGGGAGGGAGTCTGGTGACTGATGAACCTAACGACAACATCTTCGCTGGGCTTCTCCTTCATCACACCACCTGAGGGAGCTGTGGCCGGTCTGCAGTCAGAGGAGAGACGTTGGACTGAGCAAAATCAAAATCACTAGACTAACAGCTGCTATCCCACCCGTGTTTCGATCTCTTACATTGATACTGGGAGGAGCGTATATAAAAAGGTTGAGTGAGTATAAACATGTTTCCTGTGTCATACAGTATACCACTTAGAAGCGTTGCAATACAACCTCCCTGAAGTTATTGTAGGCTGTTATAAGGGGAACGGGAGCATCAGCATTCTGGACCATAAAACCATATTCTATAGGAAACACTGACTCAGAATAGAAGGTGGGATCGTTAAGATATCACATGCTACCATAATATAGTGTGCCTTCAGTGCTTTATGACTGCAACATTGCTTATACATGTATGAGGACCCAGGTatagaaaaaaacattttctacAAGACACTGGCTCCATACAGACTACAGTGAACATAAATCAATTAAGTGAAGGGACAGAGGAATTGATTGTGTGAAGAGGTGAACTCTATATTACAGTACATCAATATGCTGTATGTTTCTCCTCCAGTAGACGGACGTGCTAGACACCTTACTAGGTTAAGCCTCATCAAAAAGAAAGCGTAAATAACCCAAGGACAGACCAAAGAGTTGTGTACTAAAATAAGGTTATTTACTTAAAAATGGATACATTGGACAGGCTGTATAGAGAATAGTTTTCTTTCCTTGGTAAACTCAAAGGCCCGATGCTGTACAAAAACACATTAAAGATTTACACATTGAGATTATTCTAGATGGTTTTCTTGCATGTTACAAACGACAGGAAAACACTAGTTACTGCTTGGGTGAAGTATTTTTCTTAAATATCTACCATGTACTGTTAGCTTAATTCACAGAGAAActgtcctgacacacacacacacacactaggattTCAGcggacatgcacacaaacataagCACACATTATGAGCGCAAACCCACAAGCACTGCTAAAGCTATGCAGCATATATGTTGTTTTACGCATTTGTATGGACAAAAGTGAAGCAAAAGCCAACATTAGATAGAAGAGACAGCAGACACAATAGGACCAGGGACTTGAAAGAGAACGTTTTAAGAATACACTGGCCAAAACATAGAGCCTATGCAAGAGGTTGAACCATAACTTATCAGGGGCACAATCTCTGACGAGGCTTCCTCGTCATCATCACACCGGCAATACGAACTGTCAAGAGGTAAGGACAGTGGTTCAGATGAGGGGACATTAAGTTCTCACTTCATATTCCTCCTTTCTGTCCTGTATGAAAAGTGAAAGATCTAAAAATGCAGTTCCTCTTGTGGTAAATGGTAATCAATGGGCTGGCTCTACCCTCTGCACTGGCCCACAG

Function

symbol description
mmrn2 Predicted to be an extracellular matrix structural constituent. Involved in negative regulation of cell migration involved in sprouting angiogenesis and negative regulation of vascular endothelial growth factor receptor signaling pathway. Located in extracellular space.

NR:

description
multimerin-2-like

GO: NA

KEGG:

id description
K24247 MMRN; multimerin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609153.2 True 4692 mRNA 0.53 8 67705791 67724360

Neighbor

gene id symbol gene type direction distance location
glud1 gdh01 coding upstream 67371 67596677 ~ 67638420 (+)
psda LOC106576711 coding upstream 130742 67528611 ~ 67575049 (+)
aifm2 amid coding upstream 199110 67499187 ~ 67506681 (+)
gins1 gins1 coding upstream 259298 67443706 ~ 67446493 (+)
pygb pygb coding upstream 292506 67388041 ~ 67413285 (+)
LOC118965297 NA coding downstream 391768 68116128 ~ 68117384 (+)
LOC110527784 LOC106576702 coding downstream 403505 68127865 ~ 68140839 (+)
slc2a15a LOC106576697 coding downstream 551019 68275379 ~ 68295406 (+)
fgf8a LOC106576696 coding downstream 591972 68316332 ~ 68322937 (+)
fbxw4 fbxw4 coding downstream 614677 68339037 ~ 68396401 (+)
G74945 NA non-coding upstream 2854 67699969 ~ 67702937 (+)
G74790 NA non-coding upstream 34237 67669671 ~ 67671554 (+)
G74880 NA non-coding upstream 109199 67596369 ~ 67596592 (+)
G74879 NA non-coding upstream 109904 67595523 ~ 67595887 (+)
G74875 NA non-coding upstream 115231 67590236 ~ 67590560 (+)
G74956 NA non-coding downstream 69421 67793781 ~ 67795363 (+)
G75004 NA non-coding downstream 75815 67800175 ~ 67800581 (+)
G75034 NA non-coding downstream 139211 67863571 ~ 67871124 (+)
G75107 NA non-coding downstream 302276 68026636 ~ 68042452 (+)
G75151 NA non-coding downstream 348311 68072671 ~ 68076067 (+)
G74139 NA other upstream 920822 66784335 ~ 66784969 (+)
G74067 LOC106576735 other upstream 946807 66756207 ~ 66758984 (+)
LOC118965274 LOC106576739 other upstream 1281710 66417495 ~ 66424081 (+)
G73515 NA other upstream 1417322 66287679 ~ 66288469 (+)
LOC110527164 LOC106576754 other upstream 1783506 65915581 ~ 65922285 (+)
G75747 NA other downstream 650145 68374505 ~ 68374929 (+)
G78121 NA other downstream 2847305 70571665 ~ 70654961 (+)
ccdc85a ccdc85a other downstream 3312110 71036440 ~ 71076239 (+)
G82111 LOC106577091 other downstream 5827256 73551616 ~ 73571737 (+)
G83836 NA other downstream 7184865 74909225 ~ 74909806 (+)

Expression


Co-expression Network