fgf8a (LOC106576696)


Basic Information

Item Value
gene id fgf8a
gene name LOC106576696
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 68316332 ~ 68322937 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036983585.1
CCGCAAGTGTTGACTTTCCTCAGGTGAAGGAAGATATGTTTTAAACGCAGGGGGAGGAGGGACGCTTTTGTTCTGCAGAAAAAGGGGGCTTGTTCCTCGCAGATCGCCCTTCCATTTTAACCAGGGGTGTGAGTGCGAACAAGGGGTTGACATTGGAGCCTGCgatgggagtagaggaggggagacgGGAGTCGCCAGTCCTGCACTACCGAACACTGAAGCAACATCACCCGCTCTGAACGCACGGGACGCGCACGTTATCCACCAGGCAAAAGCCAGATATAAACTCTCTACAACAGGATACACTGGGTGATAGCGATTGAGGATTCTCTGAAGGAATTACAAAGAGATAGCAATCTGCAGCAAATTAACTGTCATCTTCATTGGCTTCGGATGACCTTGCATTTGTATCCTTATTATTAGGACACTCATCCAGCGCTTTCTTTGCCAAAACTTGAATGCACCTCTCTTCTAAGTAAGTGCACTTAAACGTTGCTAATCGAGAGGGCCGCCTGACACATAGACAGTTATTATCAATAATCAATTATCATTAATCATTATTATCAATTATCATTGTCACAGTTTCACATTTTACTGGCAAGGTTGTCGATCAGTTGTAAGCGCCAGCCTTGCCAAAACAGGCTATGGACATTTATTTGACATGAAATGTAcccacatttttacaaaaaaataattGGCTTAACCACTTCTTCCACCATCTTTGGTCGTTTTGGATTTTAATGAAGTTTTTGAAGAGCGACGACTTAATCAATTGCAACCGACACCAGTGTTTCACACAGTTCACCTTTACCAAATAACCTCGATTTTGGAACACTGCAAGCCCTGTGGTCTGTATTTATCGAAGGAACAATCAACACAATCAACATGCGACGCCTCCCTTCCCGGTTGAGTTATCTGTTCCTACACTTCTTCGCATTCTGTTACTATGCTCAGCATGTAAGCGAGCAGAGCAAGGTGACAGACCGTGTGAGCCGCAGGTTAATTCGGACCTATCAACTTTACAGCCGAACCAGCGGGAAGCATGTGCAGGTTCTGCCCAACAAGAAGATCAACGCCATGGCAGAAGATGGAGACATACACGCCAAACTCGTCGTAGAGACGGACACGTTTGGAAGTCGCGTGCGGATTAAAGGAGCAGAGACAGGATTCTACATCTGCATGAACAAGAAGGGAAAGCTGATCGGGAAGAAAAATGGTCAAGGCCGCGACTGCATCTTCTCAGAGATTGTCCTGGAGAATAACTACACGGCGCTGAGGAACGCACGCTTCGAGGGTTGGTACATGGCTTTCACCAGACGTGGACGCCCCCGGAAAGGCTCGCAAACACGGCAGCATCAACGCGAGGTCCATTTTATGAAACGACTGCCTCGGGGATCCAATCCCACTCACCCGGCCCAGCACAAGGCCTTTGACTTCGTCCACTACCCCTTCAGCCCCAGGACTAAACGCACACGCTACTCAGCCGAAGGctgaggggggcagagagggtgagacagaggaTAAAAAACAATGACTGAAGCAAGAATTAACTCCTTTCCAAAACCTCTAAAGACATTTTTTTTGTACTGAGCGTTACTATACCTAACATGTagtttttctatttttttcaaaaagtacattttttaaaagaaaaaacccataacaaatatatttttgtacCTGATACTTTTAGTACTGATGTGTTGTTTTTAGATGCACATAACTCATCATCGAACATTTGGGGTGCTGACATTTTAGTAAAGCGTGGACTTTGTATTGTCTCTCTGTATTTTGGGTTGTGTTTTTGCTTTTGTTTGACTGTTCAGAGTCGTTTGGACTCACACCTGCTGCTCCAAGAGACTTGAAGGGCCCTGATCGACCGCACTGCCAGAAAATGCTGCGTtcagagacacatacagtacacacacacacacacagcatcgaTGCTGCATTCAGGAGCGCCATGTTGAGTAACGTTGTGTTCAGTATCACACACAGCCACAACACCTCTGTTGAACGCTGTGGTGTGACCTTACTACTTTTGGGAATTCTATAGAGACAAACGCTGTTAAAGCAAACAGTGCTTTAGGTACGTACACACAATGGAAAATGTGGCAGCTATATTGATAATCACAGGTTTCCTGCAATGGTTATAACTGTAAATTAGAGGTGTAAAAATGCATTGATATGTCGGAAACCCCCTTTGTTTTTGTTACCCTGTCTGTTTTTATACATATAtaaatctatttttattttacgGATGTGTACAAATAATTTTAATGATGgattatttatttaaaatgtgtAATAAATGTACATTAGAATACTGAT
>XM_021609408.2
AAGTGTTGACTTTCCTCAGGTGAAGGAAGATATGTTTTAAACGCAGGGGGAGGAGGGACGCTTTTGTTCTGCAGAAAAAGGGGGCTTGTTCCTCGCAGATCGCCCTTCCATTTTAACCAGGGGTGTGAGTGCGAACAAGGGGTTGACATTGGAGCCTGCgatgggagtagaggaggggagacgGGAGTCGCCAGTCCTGCACTACCGAACACTGAAGCAACATCACCCGCTCTGAACGCACGGGACGCGCACGTTATCCACCAGGCAAAAGCCAGATATAAACTCTCTACAACAGGATACACTGGGTGATAGCGATTGAGGATTCTCTGAAGGAATTACAAAGAGATAGCAATCTGCAGCAAATTAACTGTCATCTTCATTGGCTTCGGATGACCTTGCATTTGTATCCTTATTATTAGGACACTCATCCAGCGCTTTCTTTGCCAAAACTTGAATGCACCTCTCTTCTAAGTAAGTGCACTTAAACGTTGCTAATCGAGAGGGCCGCCTGACACATAGACAGTTATTATCAATAATCAATTATCATTAATCATTATTATCAATTATCATTGTCACAGTTTCACATTTTACTGGCAAGGTTGTCGATCAGTTGTAAGCGCCAGCCTTGCCAAAACAGGCTATGGACATTTATTTGACATGAAATGTAcccacatttttacaaaaaaataattGGCTTAACCACTTCTTCCACCATCTTTGGTCGTTTTGGATTTTAATGAAGTTTTTGAAGAGCGACGACTTAATCAATTGCAACCGACACCAGTGTTTCACACAGTTCACCTTTACCAAATAACCTCGATTTTGGAACACTGCAAGCCCTGTGGTCTGTATTTATCGAAGGAACAATCAACACAATCAACATGCGACGCCTCCCTTCCCGGTTGAGTTATCTGTTCCTACACTTCTTCGCATTCTGTTACTATGCTCAGCCGAACCAGCGGGAAGCATGTGCAGGTTCTGCCCAACAAGAAGATCAACGCCATGGCAGAAGATGGAGACATACACGCCAAACTCGTCGTAGAGACGGACACGTTTGGAAGTCGCGTGCGGATTAAAGGAGCAGAGACAGGATTCTACATCTGCATGAACAAGAAGGGAAAGCTGATCGGGAAGAAAAATGGTCAAGGCCGCGACTGCATCTTCTCAGAGATTGTCCTGGAGAATAACTACACGGCGCTGAGGAACGCACGCTTCGAGGGTTGGTACATGGCTTTCACCAGACGTGGACGCCCCCGGAAAGGCTCGCAAACACGGCAGCATCAACGCGAGGTCCATTTTATGAAACGACTGCCTCGGGGATCCAATCCCACTCACCCGGCCCAGCACAAGGCCTTTGACTTCGTCCACTACCCCTTCAGCCCCAGGACTAAACGCACACGCTACTCAGCCGAAGGctgaggggggcagagagggtgagacagaggaTAAAAAACAATGACTGAAGCAAGAATTAACTCCTTTCCAAAACCTCTAAAGACATTTTTTTTGTACTGAGCGTTACTATACCTAACATGTagtttttctatttttttcaaaaagtacattttttaaaagaaaaaacccataacaaatatatttttgtacCTGATACTTTTAGTACTGATGTGTTGTTTTTAGATGCACATAACTCATCATCGAACATTTGGGGTGCTGACATTTTAGTAAAGCGTGGACTTTGTATTGTCTCTCTGTATTTTGGGTTGTGTTTTTGCTTTTGTTTGACTGTTCAGAGTCGTTTGGACTCACACCTGCTGCTCCAAGAGACTTGAAGGGCCCTGATCGACCGCACTGCCAGAAAATGCTGCGTtcagagacacatacagtacacacacacacacacagcatcgaTGCTGCATTCAGGAGCGCCATGTTGAGTAACGTTGTGTTCAGTATCACACACAGCCACAACACCTCTGTTGAACGCTGTGGTGTGACCTTACTACTTTTGGGAATTCTATAGAGACAAACGCTGTTAAAGCAAACAGTGCTTTAGGTACGTACACACAATGGAAAATGTGGCAGCTATATTGATAATCACAGGTTTCCTGCAATGGTTATAACTGTAAATTAGAGGTGTAAAAATGCATTGATATGTCGGAAACCCCCTTTGTTTTTGTTACCCTGTCTGTTTTTATACATATAtaaatctatttttattttacgGATGTGTACAAATAATTTTAATGATGgattatttatttaaaatgtgtAATAAATGTACATTAGAATACTGAT
>XM_021609399.2
TTGACTTTCCTCAGGTGAAGGAAGATATGTTTTAAACGCAGGGGGAGGAGGGACGCTTTTGTTCTGCAGAAAAAGGGGGCTTGTTCCTCGCAGATCGCCCTTCCATTTTAACCAGGGGTGTGAGTGCGAACAAGGGGTTGACATTGGAGCCTGCgatgggagtagaggaggggagacgGGAGTCGCCAGTCCTGCACTACCGAACACTGAAGCAACATCACCCGCTCTGAACGCACGGGACGCGCACGTTATCCACCAGGCAAAAGCCAGATATAAACTCTCTACAACAGGATACACTGGGTGATAGCGATTGAGGATTCTCTGAAGGAATTACAAAGAGATAGCAATCTGCAGCAAATTAACTGTCATCTTCATTGGCTTCGGATGACCTTGCATTTGTATCCTTATTATTAGGACACTCATCCAGCGCTTTCTTTGCCAAAACTTGAATGCACCTCTCTTCTAAGTAAGTGCACTTAAACGTTGCTAATCGAGAGGGCCGCCTGACACATAGACAGTTATTATCAATAATCAATTATCATTAATCATTATTATCAATTATCATTGTCACAGTTTCACATTTTACTGGCAAGGTTGTCGATCAGTTGTAAGCGCCAGCCTTGCCAAAACAGGCTATGGACATTTATTTGACATGAAATGTAcccacatttttacaaaaaaataattGGCTTAACCACTTCTTCCACCATCTTTGGTCGTTTTGGATTTTAATGAAGTTTTTGAAGAGCGACGACTTAATCAATTGCAACCGACACCAGTGTTTCACACAGTTCACCTTTACCAAATAACCTCGATTTTGGAACACTGCAAGCCCTGTGGTCTGTATTTATCGAAGGAACAATCAACACAATCAACATGCGACGCCTCCCTTCCCGGTTGAGTTATCTGTTCCTACACTTCTTCGCATTCTGTTACTATGCTCAGGTAACCAATCAGTCCTCGCCTAATTTCACGCAGCATGTAAGCGAGCAGAGCAAGGTGACAGACCGTGTGAGCCGCAGGTTAATTCGGACCTATCAACTTTACAGCCGAACCAGCGGGAAGCATGTGCAGGTTCTGCCCAACAAGAAGATCAACGCCATGGCAGAAGATGGAGACATACACGCCAAACTCGTCGTAGAGACGGACACGTTTGGAAGTCGCGTGCGGATTAAAGGAGCAGAGACAGGATTCTACATCTGCATGAACAAGAAGGGAAAGCTGATCGGGAAGAAAAATGGTCAAGGCCGCGACTGCATCTTCTCAGAGATTGTCCTGGAGAATAACTACACGGCGCTGAGGAACGCACGCTTCGAGGGTTGGTACATGGCTTTCACCAGACGTGGACGCCCCCGGAAAGGCTCGCAAACACGGCAGCATCAACGCGAGGTCCATTTTATGAAACGACTGCCTCGGGGATCCAATCCCACTCACCCGGCCCAGCACAAGGCCTTTGACTTCGTCCACTACCCCTTCAGCCCCAGGACTAAACGCACACGCTACTCAGCCGAAGGctgaggggggcagagagggtgagacagaggaTAAAAAACAATGACTGAAGCAAGAATTAACTCCTTTCCAAAACCTCTAAAGACATTTTTTTTGTACTGAGCGTTACTATACCTAACATGTagtttttctatttttttcaaaaagtacattttttaaaagaaaaaacccataacaaatatatttttgtacCTGATACTTTTAGTACTGATGTGTTGTTTTTAGATGCACATAACTCATCATCGAACATTTGGGGTGCTGACATTTTAGTAAAGCGTGGACTTTGTATTGTCTCTCTGTATTTTGGGTTGTGTTTTTGCTTTTGTTTGACTGTTCAGAGTCGTTTGGACTCACACCTGCTGCTCCAAGAGACTTGAAGGGCCCTGATCGACCGCACTGCCAGAAAATGCTGCGTtcagagacacatacagtacacacacacacacacagcatcgaTGCTGCATTCAGGAGCGCCATGTTGAGTAACGTTGTGTTCAGTATCACACACAGCCACAACACCTCTGTTGAACGCTGTGGTGTGACCTTACTACTTTTGGGAATTCTATAGAGACAAACGCTGTTAAAGCAAACAGTGCTTTAGGTACGTACACACAATGGAAAATGTGGCAGCTATATTGATAATCACAGGTTTCCTGCAATGGTTATAACTGTAAATTAGAGGTGTAAAAATGCATTGATATGTCGGAAACCCCCTTTGTTTTTGTTACCCTGTCTGTTTTTATACATATAtaaatctatttttattttacgGATGTGTACAAATAATTTTAATGATGgattatttatttaaaatgtgtAATAAATGTACATTAGAATACTGAT

Function

NR:

description
PREDICTED: fibroblast growth factor 8-like isoform X1

GO:

id name namespace
GO:0008543 fibroblast growth factor receptor signaling pathway biological_process
GO:0005576 extracellular region cellular_component
GO:0005104 fibroblast growth factor receptor binding molecular_function
GO:0008083 growth factor activity molecular_function

KEGG:

id description
K04358 FGF; fibroblast growth factor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036983585.1 False 2331 mRNA 0.44 5 68316332 68322937
XM_021609408.2 False 2256 mRNA 0.43 5 68316336 68322937
XM_021609399.2 True 2355 mRNA 0.44 5 68316341 68322937

Neighbor

gene id symbol gene type direction distance location
slc2a15a LOC106576697 coding upstream 20926 68275379 ~ 68295406 (+)
LOC110527784 LOC106576702 coding upstream 175493 68127865 ~ 68140839 (+)
LOC118965297 NA coding upstream 198948 68116128 ~ 68117384 (+)
mmrn2a mmrn2 coding upstream 591972 67705791 ~ 67724360 (+)
glud1 gdh01 coding upstream 677912 67596677 ~ 67638420 (+)
fbxw4 fbxw4 coding downstream 16100 68339037 ~ 68396401 (+)
borcs7 borcs7 coding downstream 82560 68405497 ~ 68408288 (+)
inaa ina coding downstream 111629 68434566 ~ 68437539 (+)
LOC118966747 NA coding downstream 131900 68454837 ~ 68454893 (+)
LOC118965305 NA coding downstream 163977 68486914 ~ 68495090 (+)
G75702 NA non-coding upstream 30706 68232213 ~ 68285626 (+)
G75167 NA non-coding upstream 213676 68099714 ~ 68102656 (+)
G75165 NA non-coding upstream 219658 68095675 ~ 68096674 (+)
G75117 NA non-coding upstream 236844 68078074 ~ 68079488 (+)
G75151 NA non-coding upstream 240265 68072671 ~ 68076067 (+)
G75745 NA non-coding downstream 54780 68377717 ~ 68378334 (+)
G75888 NA non-coding downstream 122461 68445398 ~ 68445652 (+)
G75893 NA non-coding downstream 136386 68459323 ~ 68460387 (+)
G75948 NA non-coding downstream 173664 68496601 ~ 68497921 (+)
G76016 NA non-coding downstream 231676 68554613 ~ 68554908 (+)
G74139 NA other upstream 1531363 66784335 ~ 66784969 (+)
G74067 LOC106576735 other upstream 1557348 66756207 ~ 66758984 (+)
LOC118965274 LOC106576739 other upstream 1892251 66417495 ~ 66424081 (+)
G73515 NA other upstream 2027863 66287679 ~ 66288469 (+)
LOC110527164 LOC106576754 other upstream 2394047 65915581 ~ 65922285 (+)
G75747 NA other downstream 51568 68374505 ~ 68374929 (+)
G78121 NA other downstream 2248728 70571665 ~ 70654961 (+)
ccdc85a ccdc85a other downstream 2713533 71036440 ~ 71076239 (+)
G82111 LOC106577091 other downstream 5228679 73551616 ~ 73571737 (+)
G83836 NA other downstream 6586288 74909225 ~ 74909806 (+)

Expression


Co-expression Network