XLOC_019799 (aldocb)


Basic Information

Item Value
gene id XLOC_019799
gene name aldocb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 39608637 ~ 39639954 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00038963
ATTGCTTTGAGCCGCTGACATTATGACGCACCAGTATCCCGCTCTCACCGCCGAGCAGAAGAAGGAGCTGCAGGACATCGCTCAGCGTATCGTCGCTCCAGGAAAGGGCATCCTCGCCGCAGATGAGTCCACAGGTAGCATGGCCAAGCGCCTGAACCCAATCGGAGTGGAGAACACAGAGGAGAACCGCCGTCTTTACCGTCAACTCCTTTTCTCTGCTGACGAGCGCATTGACAAGTGCATCGGTGGTGTTATCTTCTTCCACGAGACCCTCTATCAGAACACTGATGACGGCACAAACTTCGCCCAACTGATCAAGGACAGAGGCATTGTTGTAGGAATCAAGGTTGACAAAGGTGTCGTTCCTCTGGCTGGAACAAACGGAGAGACCACAACACAGGGGCTGGATGGCCTGTCAGAACGATGTGCCCAGTATAAGAAAGACGGCGCAGACTTTGCCAAGTGGCGCTCTGTGCTGAAGATCAGCGACACCACTCCTTCAGAGTTAGCCATCATGGAGAACGCTAATGTCCTGGCCCGCTACGCCAGCATCTGCCAGCAGAACGGCATTGTGCCCATTGTGGAGCCTGAGATTTTACCTGACGGTGAGCACGACTTGAAGCGCTGCCAGTATGTTACAGAAAAgGTTCTTGCTGCCTGCTACAAGGCCCTGTCTGACCATCATGTGTATTTGGAGGGAACTCTTCTGAAACCCAACATGGTGACAGCGGGACACTCCTGCCCCACCAAATACTCCAGTGAGGAGATCGCTATGGCAACAGTGACAGCCCTGCGCCGCACCGTTCCTCCCGCAGTATCAGGAGTGACTTTCCTCTCTGGAGGTCAGAGCGAGGAGGAGGCGTCTGTCAACCTGAACTCCATCAACAATTGCCCTCTGGCAAAACCCTGGCCCCTCACCTTCTCCTATGGACGTGCCTTGCAGGCCTCAGCTCTGAGCGCGTGGCGTGGAGCCAAGAGCAATGAGAAGGCTGCAACTGAGGAGTTCATCAAGCGCGCTGAGGCTAACGGATTGGCTGCTCAGGGCAAGTACGTCTCCAGTGGAACCTGCGGAGCAGCAGGACAGTCGCTTTACGTGGCCAATCACGCCTACTGAACATCCTGCGTCCCAGCGTTCAGCTCTCCGCCAGCCAATAGTATAGTGCACAGCCGCTACCCCTCCTGTCACCGACCAATCACAGGCCTGCGCTGTCTTCTGTACTTTACGGTTGCCGTTGCAAATGTCTCATAATatatctatttaaatatatattaaactgaaaaaaagaaaaggtacgcaaaagattatttttattttcagaaacttcTAGGCATGACTTCATGCGGTAAACaaggaaacagtattttttcGTGGCTCATTAGCTGGATGTACATGTATATGTCAGTCGTTTGGGTTTTATATGATTGCATTCCAGTTCCGGCACCAGTCGACTTCTCACATTCCTTTTAGTGCAGTTTGGATTCATAATGATGTGTGGAGGATGTGAACACAGATCAGTGTACGCCAGCCAGCAGGACCAGTTTGTCAAATTGGGAGTAAAAGCAGAGTAATATATATGTAACTGAGTGATTAACTACAGCAGACTCTGAGGAGgaatattattttgtgttgtgttcaCATATGATATTAAACCATTGTCTGGGCTGCGTGATTTATCGTTTATGAAGTTTAACATGAAATACGTAATATATTAGTTTGGAAATTGGAGCGTTATCTTGAAATCGTGCTCTGTGTTGTGTGCTTGAGTGTGTCCAGCTCTTCTTCCTCTCCTCTCTGTGTTTGTGACACAGTGCTACATCAGTAATAATCACTTCTATTGGTTGCGAGCGGCGGAGCGGACCAAACTGTGGAGCTTGTGGGGGAGGAGAGCGCTCACTTCTCTGTCGACAAAACGTGATGTTGTGATTTGATGTTGTTCCCTAAGCACTTTGTGTGTCAGATAGttttaaaaatccaataaaattactgtaaaacccTAGATTGTGTTTATGGTTATTATTGGAGTTTTGCATGCGCATGttctcttaaaggaatagttcattaaaaaatgaaaagaagatattttttaaaatgttggaaacctgttaccACCCTTACAAAAAATAACTGCAGTACAACAACAGTGTATAGAAGTATAACTGCAGTAAAATTAAGTACAATTGCAATACAAAGTATAAACATATttcaaatacagtaaaataaagttcAACAGCAGTTTAGATCAGAGTAAACTGGAGTAATATCAAGTAAACTCTGTCTTTACTGCACTTGTGCTGCTGTAGTCTAATATGCCAACGGTGTGGTAAGAACTGTACTGCACTTGTGCCCCAagggcagggccggagtgggactcctttttagccctggagtttcaagcattagaccggctcaacgtcatttccaattcagtttttaattacaCTATCCGgtcttttttaagaaaacagctgctttagaacttcaaatgttcaaccaccttgcagttttatatgtcttaacaataaaaatgaagaaaaaaaaaaaaagaagtactcaggtgaggatcgaacatGGGTTGACGATGTCGTCActcaacgtgctgaccactggaccacaatttCGCTGGAGTTTGCCagagctgcagcaaaataatgaataaaaagagtgaggctatggtcaaataaataaataaatgaaaacaagtgCGAcggctgagagtgcaagcagctaaaaaaaaacaccggccctcgcggccaaaaaaacagaccggcccacggggaactctcccggtcctcccgattggccaatccgggcctgcccaAGGGGTTTGTTCTTCAACATCTT
>TCONS_00038964
TTTCGACAGCAGTGCAGCTTTtacatccctctctctctcctaaGCAGATTGCTTTGAGCCGCTGACATTATGACGCACCAGTATCCCGCTCTCACCGCCGAGCAGAAGAAGGAGCTGCAGGACATCGCTCAGCGTATCGTCGCTCCAGGAAAGGGCATCCTCGCCGCAGATGAGTCCACAGGTAGCATGGCCAAGCGCCTGAACCCAATCGGAGTGGAGAACACAGAGGAGAACCGCCGTCTTTACCGTCAACTCCTTTTCTCTGCTGACGAGCGCATTGACAAGTGCATCGGTGGTGTTATCTTCTTCCACGAGACCCTCTATCAGAACACTGATGACGGCACAAACTTCGCCCAACTGATCAAGGACAGAGGCATTGTTGTAGGAATCAAGGTTGACAAAGGTGTCGTTCCTCTGGCTGGAACAAACGGAGAGACCACAACACAGGGGCTGGATGGCCTGTCAGAACGATGTGCCCAGTATAAGAAAGACGGCGCAGACTTTGCCAAGTGGCGCTCTGTGCTGAAGATCAGCGACACCACTCCTTCAGAGTTAGCCATCATGGAGAACGCTAATGTCCTGGCCCGCTACGCCAGCATCTGCCAGCAGAACGGCATTGTGCCCATTGTGGAGCCTGAGATTTTACCTGACGGTGAGCACGACTTGAAGCGCTGCCAGTATGTTACAGAAAAgGTTCTTGCTGCCTGCTACAAGGCCCTGTCTGACCATCATGTGTATTTGGAGGGAACTCTTCTGAAACCCAACATGGTGACAGCGGGACACTCCTGCCCCACCAAATACTCCAGTGAGGAGATCGCTATGGCAACAGTGACAGCCCTGCGCCGCACCGTTCCTCCCGCAGTATCAGGAGTGACTTTCCTCTCTGGAGGTCAGAGCGAGGAGGAGGCGTCTGTCAACCTGAACTCCATCAACAATTGCCCTCTGGCAAAACCCTGGCCCCTCACCTTCTCCTATGGACGTGCCTTGCAGGCCTCAGCTCTGAGCGCGTGGCGTGGAGCCAAGAGCAATGAGAAGGCTGCAACTGAGGAGTTCATCAAGCGCGCTGAGGCTAACGGATTGGCTGCTCAGGGCAAGTACGTCTCCAGTGGAACCTGCGGAGCAGCAGGACAGTCGCTTTACGTGGCCAATCACGCCTACTGAACATCCTGCGTCCCAGCGTTCAGCTCTCCGCCAGCCAATAGTATAGTGCACAGCCGCTACCCCTCCTGTCACCGACCAATCACAGGCCTGCGCTGTCTTCTGTACTTTACGGTTGCCGTTGCAAATGTCTCATAATatatctatttaaatatatattaaactgaaaaaaagaaaaggtacgcaaaagattatttttattttcagaaacttcTAGGCATGACTTCATGCGGTAAACaaggaaacagtattttttcGTGGCTCATTAGCTGGATGTACATGTATATGTCAGTCGTTTGGGTTTTATATGATTGCATTCCAGTTCCGGCACCAGTCGACTTCTCACATTCCTTTTAGTGCAGTTTGGATTCATAATGATGTGTGGAGGATGTGAACACAGATCAGTGTACGCCAGCCAGCAGGACCAGTTTGTCAAATTGGGAGTAAAAGCAGAGTAATATATATGTAACTGAGTGATTAACTACAGCAGACTCTGAGGAGgaatattattttgtgttgtgttcaCATATGATATTAAACCATTGTCTGGGCTGCGTGATTTATCGTTTATGAAGTTTAACATGAAATACGTAATATATTAGTTTGGAAATTGGAGCGTTATCTTGAAATCGTGCTCTGTGTTGTGTGCTTGAGTGTGTCCAGCTCTTCTTCCTCTCCTCTCTGTGTTTGTGACACAGTGCTACATCAGTAATAATCACTTCTATTGGTTGCGAGCGGCGGAGCGGACCAAACTGTGGAGCTTGTGGGGGAGGAGAGCGCTCACTTCTCTGTCGACAAAACGTGATGTTGTGATTTGATGTTGTTCCCTAAGCACTTTGTGTGTCAGATAGttttaaaaatccaataaaattactgtaaaacccT

Function

symbol description
aldocb Predicted to enable fructose-bisphosphate aldolase activity. Predicted to be involved in fructose 1,6-bisphosphate metabolic process and glycolytic process. Predicted to be active in cytosol. Is expressed in several structures, including axis; nervous system; neural tube; solid lens vesicle; and trigeminal placode. Human ortholog(s) of this gene implicated in autoimmune disease of the nervous system. Orthologous to human ALDOC (aldolase, fructose-bisphosphate C).

GO:

id name namespace
GO:0030388 fructose 1,6-bisphosphate metabolic process biological_process
GO:0006096 glycolytic process biological_process
GO:0005829 cytosol cellular_component
GO:0016829 lyase activity molecular_function
GO:0004332 fructose-bisphosphate aldolase activity molecular_function
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030821-1 Predicted to enable fructose-bisphosphate aldolase activity. Predicted to be involved in fructose 1,6-bisphosphate metabolic process and glycolytic process. Predicted to be active in cytosol. Is expressed in several structures, including axis; nervous system; neural tube; solid lens vesicle; and trigeminal placode. Human ortholog(s) of this gene implicated in autoimmune disease of the nervous system. Orthologous to human ALDOC (aldolase, fructose-bisphosphate C).

Ensembl:

ensembl_id ENSDARG00000019702

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00038963 False 2842 mRNA 0.46 8 39608637 39628771
TCONS_00038964 True 2043 mRNA 0.49 9 39609483 39639954

Neighbor

gene id symbol gene type direction distance location
XLOC_019798 pigs coding downstream 4009 39583458 ~ 39604628 (-)
XLOC_019797 srsf1b coding downstream 31120 39567505 ~ 39577517 (-)
XLOC_019796 dynll2b coding downstream 41783 39557433 ~ 39566854 (-)
XLOC_019795 sept4a coding downstream 61900 39512437 ~ 39546737 (-)
XLOC_019794 NA coding downstream 246461 39359151 ~ 39362176 (-)
XLOC_019800 rskrb coding upstream 5808 39645762 ~ 39670375 (-)
XLOC_019801 NA coding upstream 265949 39905903 ~ 39912107 (-)
XLOC_019802 NA coding upstream 283816 39923770 ~ 39924444 (-)
XLOC_019803 tmigd1 coding upstream 285425 39925379 ~ 39931400 (-)
XLOC_019804 slc47a2.1 coding upstream 352197 39992151 ~ 40015530 (-)
XLOC_019793 NA non-coding downstream 271541 39328103 ~ 39337096 (-)
XLOC_019791 CU442763.1 non-coding downstream 341331 39267225 ~ 39267306 (-)
XLOC_019782 NA non-coding downstream 975730 38629308 ~ 38632907 (-)
XLOC_019779 NA non-coding downstream 1145491 38457283 ~ 38463146 (-)
XLOC_019814 NA non-coding upstream 888833 40528787 ~ 40579807 (-)
XLOC_019825 CU570984.1 non-coding upstream 1611477 41251431 ~ 41251548 (-)
XLOC_019828 CABZ01034722.1 non-coding upstream 1711591 41351545 ~ 41351665 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000041_00558941_00563881 ALDOA, ALDOCB, ALDOC.L, ALDOC coding CI01000041 null 558211 ~ 566505 (-)
bowfin (Amia calva) AMCG00005512 aldoc,LOC107581922,LOC107661747,LOC107587231 coding CM030142.1 CM030142.1 2480675 ~ 2484452 (+)