G7396


Basic Information

Item Value
gene id G7396
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 8620570 ~ 8620924 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU9084
ctttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggacgacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgacc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9084 True 355 lncRNA 0.47 1 8620570 8620924

Neighbor

gene id symbol gene type direction distance location
LOC110515166 ankub1 coding upstream 7903 8602725 ~ 8612667 (+)
LOC110529807 pfn2 coding upstream 126226 8486654 ~ 8494344 (+)
LOC110505168 LOC106574179 coding upstream 348838 8255142 ~ 8271732 (+)
LOC110501328 LOC106574178 coding upstream 389004 8229189 ~ 8231566 (+)
LOC118943893 LOC106574176 coding upstream 395303 8224365 ~ 8225267 (+)
LOC110532690 NA coding downstream 3962 8624886 ~ 8634174 (+)
LOC110519734 ankub1 coding downstream 46245 8667169 ~ 8693760 (+)
LOC118936489 ankub1 coding downstream 100646 8721570 ~ 8747704 (+)
LOC110510915 ankub1 coding downstream 144065 8764989 ~ 8771138 (+)
LOC118966266 ankub1 coding downstream 169307 8790231 ~ 8798967 (+)
G7387 NA non-coding upstream 9720 8610502 ~ 8610850 (+)
G7383 NA non-coding upstream 13599 8606748 ~ 8606971 (+)
G7047 NA non-coding upstream 124729 8495735 ~ 8495841 (+)
G7092 NA non-coding upstream 145002 8475364 ~ 8475568 (+)
G7397 NA non-coding downstream 9 8620933 ~ 8676015 (+)
G7414 NA non-coding downstream 90590 8711514 ~ 8768048 (+)
G7417 NA non-coding downstream 101959 8722883 ~ 8723224 (+)
G7436 NA non-coding downstream 135547 8756471 ~ 8808166 (+)
G7440 NA non-coding downstream 147600 8768524 ~ 8797364 (+)
G6807 NA other upstream 583416 8036617 ~ 8037154 (+)
G6518 NA other upstream 734663 7885391 ~ 7885907 (+)
G6434 NA other upstream 894961 7725046 ~ 7725609 (+)
LOC118966784 LOC106574127 other downstream 838024 9450932 ~ 9460358 (+)
LOC110510920 LOC106574155 other downstream 1362851 9980527 ~ 9991542 (+)
gipc3 LOC106574151 other downstream 1520320 10140230 ~ 10162948 (+)
LOC110523899 LOC106574090 other downstream 2855740 11433102 ~ 11514427 (+)
LOC110538561 LOC106574035 other downstream 4617689 13238613 ~ 13295452 (+)

Expression


Co-expression Network