G7573


Basic Information

Item Value
gene id G7573
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 8864181 ~ 8865177 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU9300
gttctcttgataagtgtgtgaattggaccattttcctgtcatacaaagcattcaaaatgtacttttgggtatcagggAAAGTGGATGGAGTCAAAAGTACATTTTTGTCCTTTATGAATGTActgaagttgtcaaaaatataaatagttaaagtacagatacccccaaaacgaTTTAAataatttttacttaagtactttgcaCCACTGAAAACAAACCTTTTCTAATGTCTCTATATCACTGGCTTGCAGGGTTTTCACCATTGACCCTTCATGTAATGGTATCGAAGTTCAAGATCCATCTTGGCTTAATGTAGGTAACAAGTATTGAAGGTGTATAACTTAAACTTTTGTTAGTCAACGTTCACGTTCGTAATGATAGTTTATTACACTTGTCTGAGCAGTCAAACTGGTATGAAAAATATCCCATTCATAATAGAAAAGACAATGTTCAGAATACCTGGAGTGACAATTGATGGAAAGGGTTTAGAGCATTACAAAAGTTTGATTAAAAACGGAATATTTATTCACCCACAATTTATTCTTTGCGCACTCTTTCAACTTGAAAATTAAGTTATGTTCAAGGATATTTAGATTTTTGTGGCTTAAAAATAGAGTACAAACTCAGTCTGTACATCACTTTAATATTAATAACCAATGTCAAGGCATCATGATACAGAGAAAGACATACAAATGCTACAGTCTACCAACATCAAATAAATGCTGATGACAGACATATTTATGCAAAAAAAAGGGGGTAAATTAATTTAGATACAGTCACAAGCTCCAATCTGAATGGCAGCAGGGAGAATAATGTTTATTGGTCATTAACAGTCTCATGATGTCCGGGCCTTCATTTGAGGAAACTTCTCCTGGAGCCCGGCTTGCTTTTGTCTCTCTCCGTTCTGCTTTCTGTTCTTAGCACGGAGGTGTTTCTCTAGACGAAGCCTGGAAAAAATAAAGAAGACTAATTGTGACAACAGACGAGTGCTTTTGCC

Function

NR:

description
PREDICTED: 39S ribosomal protein L47, mitochondrial-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9300 True 997 lncRNA 0.35 1 8864181 8865177

Neighbor

gene id symbol gene type direction distance location
LOC118966103 ankub1 coding upstream 12809 8799458 ~ 8851372 (+)
LOC118966266 ankub1 coding upstream 65214 8790231 ~ 8798967 (+)
LOC110510915 ankub1 coding upstream 93043 8764989 ~ 8771138 (+)
LOC118936489 ankub1 coding upstream 116477 8721570 ~ 8747704 (+)
LOC110519734 ankub1 coding upstream 170421 8667169 ~ 8693760 (+)
ndufb5 LOC106574141 coding downstream 2933 8868110 ~ 8871284 (+)
usp13 LOC106574137 coding downstream 12414 8877591 ~ 8915400 (+)
LOC110531220 NA coding downstream 306791 9171968 ~ 9183082 (+)
LOC110531147 cssa16h2orf72 coding downstream 353481 9218658 ~ 9221408 (+)
psmd1 psmd1 coding downstream 374942 9240119 ~ 9300065 (+)
G7436 NA non-coding upstream 56015 8756471 ~ 8808166 (+)
G7440 NA non-coding upstream 66817 8768524 ~ 8797364 (+)
G7414 NA non-coding upstream 96133 8711514 ~ 8768048 (+)
G7417 NA non-coding upstream 140957 8722883 ~ 8723224 (+)
G7581 NA non-coding downstream 9604 8874781 ~ 8877527 (+)
G7740 NA non-coding downstream 265427 9130604 ~ 9130845 (+)
G7757 NA non-coding downstream 288361 9153538 ~ 9153843 (+)
G7776 NA non-coding downstream 330178 9195355 ~ 9195727 (+)
G7780 NA non-coding downstream 352042 9217219 ~ 9218494 (+)
LOC110505168 LOC106574179 other upstream 608303 8255142 ~ 8271732 (+)
LOC110501328 LOC106574178 other upstream 633946 8229189 ~ 8231566 (+)
G6807 NA other upstream 827027 8036617 ~ 8037154 (+)
G6518 NA other upstream 978274 7885391 ~ 7885907 (+)
G6434 NA other upstream 1138572 7725046 ~ 7725609 (+)
LOC118966784 LOC106574127 other downstream 593771 9450932 ~ 9460358 (+)
LOC110510920 LOC106574155 other downstream 1118598 9980527 ~ 9991542 (+)
gipc3 LOC106574151 other downstream 1276067 10140230 ~ 10162948 (+)
LOC110523899 LOC106574090 other downstream 2611487 11433102 ~ 11514427 (+)
LOC110538561 LOC106574035 other downstream 4373436 13238613 ~ 13295452 (+)

Expression


Co-expression Network