G7581


Basic Information

Item Value
gene id G7581
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 8874781 ~ 8877527 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU9312
gcggcttttgtggagcgatgggtaacgatgcttcgagggtgactgttgatgtgtgcagaaggtccctggttcgcgcccgggtatgggcgaggggacggtttaaaaattatactgttacacgacacaaacaacaacacagagttacacatggaataaacaataacacaatagaaaaaatctgtatacagtgtgtgcaaatgagacTGCCACCAGACTGCCAGAGAACGGGTGTCCACTGGTGGcaagccgacgcttggcattgtgcacggagatcttaggcttgtgtgaggctgctcacCCAtggaacccatttcatgaagatcccgatgaacagttattgtactgatgttgcttccagaggcagtttggaactcggtagtaagtgttggaaccgaggacagatgatttttgcacgctacgagcttcagcactcggcggtcccattctgtgagcttgtgtgtcctatcacttcgcagctgagctattgttgctcctagacgtttccacttcacaataacagcatttacagttgaccggggcagctttagcagggcagaattTTGACCAACTGGAAAGGTGTCGTCCTATgttggtgccacgttgaaagtcacagagcttttcagtaaggccattctactgccaatgtttgtctatggagattgcatggctgtgtgctcgattttatacacctgtctgcaacagatgtggctgaaatagccaaatccactaatttgaaaggatgtccacatacttttgtaaatatactgtatgtagtgtcGGCTATATCTGGACAAAAAGTAGACCTGTTATTACAGTAACGCTTTtatcagacctcaggataagacccagatgcagacagctagagtcacagATGTTTATTGACCCAAACAGGGGGCAAAGCAAAAGACAGGTCAGAGGTCCATAATCCAGGGCATAGTCAAGAAGGTACAGAACAGTAGGCAGGCTtggagtcagggcaggcagaatggccaGAATCAgggaaactaggaaacagaacttgagcatgcAGGGAGATGGGACaacacgctggtaagacctgacaagacgacctggcaaaagacaaacagagaacacaggtataaatacactggggataatgaggaagatgggggccacctggagggggttggagacaagcacaaagacaggtgaaacggaTAAGGGTGTGACAGCTGTTACCTATAAAATATAAAGTATTGTCTGAAATAATTTATTTATCTTACAAAAACTTGAAGCAAATTTGGATACATAGGCCTATGCAGCTTCTAAGTAGCCTAGTATGGACTTGAGCGTTTGGGCAAAATATGTCAAATTTATTTCACAATCATAAAATAAACGCCTATAGCACAAGCGGTGCAATTTGtagccttcttcttcttctatgatattGTGGTGGTCCGCAAACAAACGTTTAAAGTGCATGCcaccaaccaattgtgctatcaATCATGAGCTGTGTtcaaatacccatactaacatactgtatactacataatTCATGAGTaaatactacatactattagttcattttagtatactgtaaagaATGGgatcctttcagttgatgctgttgctatgcaacctcttgttagctagttagcataacaCATGACGAGTTAGACATTTTACGACTTcgggtgtgttcttaaattcaatatggagtgccagagtgcgctcgtaaattcagagcattgtcagattgtcctTTTCACTCTCCgagtgcacactggacgctcgggccgaggagtagggttgatttgagcgttctgacattacaatggcagtcaagcatcctagctaatgttggctagcttgctagctacttccagacacaaatgagaccactctgaccattttacccACCCTAGCAGACCTGGTTAtgcagttttcatgttatccagtgagttggtgactgtaactgtgctgctggcaaaaaTGTAAGTACGCTTTTTTGCCAACctttactgacaccagccatgttcaacgggtgttgagcactTGTAAATTCATTATTCTGCACTTTGGTagtcagacgagagtgctctgaaatcggagtagatagccagagcgaatttaagAAAGCACccaaatgtccattgagaacgcgcaatgtggttcgtaaggacagcgtagctaacaaattcaTAACCGGTTAATCTCTGGTAGTGAAGTGAGCTGTATCATAGTCCTGTCACTGCTTCACTCCCTGGCTACGCGGATGCTCCTCCTCCATGACAATATCCGTCtctgtaaggtaacttatttgaaaagtcattatttGATTACATTGATCAACATGTTCTTaatatttgtcataattagttaaagcaatgaatttgtatctgcTGTTGTTGTACTTGGCtgcatattttccgccattttcttAAAATCTGAAAACGATGTGAAACCACGCCCATTTcatgaagaattgcattatgggccctaaattATGAAAATAGTGTCCTCTGCGTCTATACTTCATATTTTGGcgaatttagtacgacatccgggaacttttggcatactaactatatccatactatgaacaataagcatactatatactcaattcacgccacaaatagtatggttagtgcTGTTAGTATGAGTATTGGAACACAGCTATGGTCTTCCTAATTACGTACTACTaagaaaatacaatttaaaaaccaAATAAATCCCTACTAGTTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU9312 True 2712 lncRNA 0.43 2 8874781 8877527

Neighbor

gene id symbol gene type direction distance location
ndufb5 LOC106574141 coding upstream 3497 8868110 ~ 8871284 (+)
LOC118966103 ankub1 coding upstream 23409 8799458 ~ 8851372 (+)
LOC118966266 ankub1 coding upstream 75814 8790231 ~ 8798967 (+)
LOC110510915 ankub1 coding upstream 103643 8764989 ~ 8771138 (+)
LOC118936489 ankub1 coding upstream 127077 8721570 ~ 8747704 (+)
usp13 LOC106574137 coding downstream 64 8877591 ~ 8915400 (+)
LOC110531220 NA coding downstream 294441 9171968 ~ 9183082 (+)
LOC110531147 cssa16h2orf72 coding downstream 341131 9218658 ~ 9221408 (+)
psmd1 psmd1 coding downstream 362592 9240119 ~ 9300065 (+)
LOC118966743 LOC106574127 coding downstream 550990 9428517 ~ 9436879 (+)
G7573 NA non-coding upstream 9604 8864181 ~ 8865177 (+)
G7436 NA non-coding upstream 66615 8756471 ~ 8808166 (+)
G7440 NA non-coding upstream 77417 8768524 ~ 8797364 (+)
G7414 NA non-coding upstream 106733 8711514 ~ 8768048 (+)
G7740 NA non-coding downstream 253077 9130604 ~ 9130845 (+)
G7757 NA non-coding downstream 276011 9153538 ~ 9153843 (+)
G7776 NA non-coding downstream 317828 9195355 ~ 9195727 (+)
G7780 NA non-coding downstream 339692 9217219 ~ 9218494 (+)
G8000 NA non-coding downstream 353999 9231526 ~ 9231756 (+)
LOC110505168 LOC106574179 other upstream 618903 8255142 ~ 8271732 (+)
LOC110501328 LOC106574178 other upstream 644546 8229189 ~ 8231566 (+)
G6807 NA other upstream 837627 8036617 ~ 8037154 (+)
G6518 NA other upstream 988874 7885391 ~ 7885907 (+)
G6434 NA other upstream 1149172 7725046 ~ 7725609 (+)
LOC118966784 LOC106574127 other downstream 581421 9450932 ~ 9460358 (+)
LOC110510920 LOC106574155 other downstream 1106248 9980527 ~ 9991542 (+)
gipc3 LOC106574151 other downstream 1263717 10140230 ~ 10162948 (+)
LOC110523899 LOC106574090 other downstream 2599137 11433102 ~ 11514427 (+)
LOC110538561 LOC106574035 other downstream 4361086 13238613 ~ 13295452 (+)

Expression


Co-expression Network