G15418


Basic Information

Item Value
gene id G15418
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 16613574 ~ 16614654 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU18101
aaaaataacatggctatatacagggaacagaaaataacatggctatatgcagggaacagaaaataacatggctatatacagggaacagaaaataacatggctatatgcagggaacagaaaataacatggttatctatatacagggagtagaaaataacatggctgtatacaggaagtagaaaataacatggctatatacagggagtagaaaataacatggctgtatacaggaagtagaaaataacatggctatctatatacagggagtagaaaataacatggctatatacagggagtagaaaataacatggctatatacagggagtagaaaataacatggctatatacagggagtagaaaataacatggctatatacagggagtagaaaataacatggctatatacagggagtagaaaataacatggctatatacagggagtagaaaataacatggctgtatatatacagggagtagaaaataacatggctatctatgtacagggagtagaaaataacatggctgtatacagggagtaaaaAATAccatggctatctatatacagggagtagaaaataccatggctatctatatacagggagtaaaaaataacatggctatctatatacagggagtagaaaataacatggctatctatatacagggagtagaaaataacattgcTATTGATAGGGAGTACAAAAATAACATTGCTATATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18101 True 721 lncRNA 0.39 2 16613574 16614654

Neighbor

gene id symbol gene type direction distance location
LOC118941201 NA coding upstream 20607 16578956 ~ 16592967 (+)
LOC118941197 NA coding upstream 51390 16555492 ~ 16562184 (+)
LOC110491555 LOC106573918 coding upstream 124634 16479980 ~ 16488940 (+)
LOC110491417 LOC106573922 coding upstream 432592 16157932 ~ 16180982 (+)
LOC110490588 LOC106573927 coding upstream 637718 15922503 ~ 15975856 (+)
LOC118941333 NA coding downstream 57582 16672236 ~ 16678840 (+)
LOC110491738 NA coding downstream 81078 16695732 ~ 16709685 (+)
LOC118941434 NA coding downstream 115747 16730401 ~ 16751454 (+)
LOC100135798 LOC100135798 coding downstream 211366 16826020 ~ 16827539 (+)
ddx49 ddx49 coding downstream 261042 16875696 ~ 16885634 (+)
G15391 LOC106581772 non-coding upstream 100921 16512426 ~ 16512653 (+)
G15384 NA non-coding upstream 173539 16439823 ~ 16440035 (+)
G15372 NA non-coding upstream 194555 16418405 ~ 16419019 (+)
G15374 NA non-coding upstream 196146 16417221 ~ 16417428 (+)
G15368 NA non-coding upstream 206174 16406601 ~ 16407400 (+)
G15421 NA non-coding downstream 109219 16723873 ~ 16725578 (+)
G15438 NA non-coding downstream 129194 16743848 ~ 16748780 (+)
G15502 NA non-coding downstream 148295 16762949 ~ 16763209 (+)
G15519 NA non-coding downstream 165685 16780339 ~ 16780597 (+)
G15536 NA non-coding downstream 181669 16796323 ~ 16796597 (+)
LOC110490510 LOC106573976 other upstream 897892 15694810 ~ 15716774 (+)
sass6 sass6 other upstream 1145586 15447458 ~ 15468011 (+)
G13639 NA other upstream 1651571 14961554 ~ 14962003 (+)
G13434 NA other upstream 1800950 14811771 ~ 14812624 (+)
LOC110492606 LOC106573909 other downstream 301845 16916482 ~ 16920945 (+)
LOC110492876 LOC106613263 other downstream 348403 16962997 ~ 16967790 (+)
LOC110495874 LOC106573877 other downstream 1039553 17654164 ~ 17673094 (+)
ccdc124 cc124 other downstream 1361310 17975918 ~ 17991176 (+)
G17420 NA other downstream 2268069 18882723 ~ 18956208 (+)

Expression


Co-expression Network