G20089


Basic Information

Item Value
gene id G20089
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 20465333 ~ 20557393 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU23439
tagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactcccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggcgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggctcattcagagatcctcactgaacttctggagagagtttgctgcacttaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaagaagtttgaaatatc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU23439 True 508 lncRNA 0.39 3 20465333 20557393

Neighbor

gene id symbol gene type direction distance location
LOC110505853 LOC106573580 coding downstream 103267 20320374 ~ 20362066 (-)
gpx4a LOC106573579 coding downstream 146585 20311803 ~ 20318748 (-)
LOC110505771 LOC106573576 coding downstream 155218 20227187 ~ 20310115 (-)
LOC110505628 LOC106573575 coding downstream 248369 20212920 ~ 20216964 (-)
LOC110505456 LOC106573574 coding downstream 253384 20205576 ~ 20211949 (-)
LOC110532063 ncan coding upstream 29193 20586586 ~ 20842911 (-)
LOC110506380 NA coding upstream 328144 20885537 ~ 20902039 (-)
rfxank rfxank coding upstream 362233 20919626 ~ 20922933 (-)
tmem221 LOC106573585 coding upstream 370416 20927809 ~ 20932452 (-)
LOC110532071 LOC106573588 coding upstream 430663 20988056 ~ 21005209 (-)
G20067 NA non-coding downstream 30494 20434317 ~ 20434839 (-)
G20032 NA non-coding downstream 161512 20303589 ~ 20303821 (-)
G20029 NA non-coding downstream 164240 20300858 ~ 20301093 (-)
G20028 NA non-coding downstream 165258 20299853 ~ 20300075 (-)
G20022 NA non-coding downstream 173851 20291243 ~ 20291482 (-)
G20142 hpln4 non-coding upstream 6671 20564064 ~ 20565568 (-)
G20149 NA non-coding upstream 17638 20575031 ~ 20575235 (-)
G20175 NA non-coding upstream 85831 20643224 ~ 20643961 (-)
G20209 NA non-coding upstream 137599 20694992 ~ 20695369 (-)
G20224 NA non-coding upstream 165747 20723140 ~ 20723618 (-)
LOC110502937 ccl25 other downstream 832716 19630376 ~ 19633058 (-)
mydgf LOC106573827 other downstream 1579681 18876547 ~ 18888907 (-)
LOC110497762 LOC106573859 other downstream 2070473 18390123 ~ 18450517 (-)
LOC110497564 LOC106573866 other downstream 2370395 18089520 ~ 18098678 (-)
G16161 LOC106573901 other downstream 3208092 17255236 ~ 17257241 (-)
G20266 NA other upstream 241727 20799120 ~ 20800008 (-)
LOC118945319 NA other upstream 527905 21085298 ~ 21089250 (-)
LOC110507736 LOC106573601 other upstream 978540 21535882 ~ 21565723 (-)
G21993 NA other upstream 1824477 22381870 ~ 22382208 (-)
G22350 LOC106573623 other upstream 2282452 22839845 ~ 22843305 (-)

Expression


Co-expression Network