G23592


Basic Information

Item Value
gene id G23592
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 23828394 ~ 23828945 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU27210
TGGCATTTTAACCTAACCTTCGTGTCATGATCGCGTCTGGTGGGGacagacaaaatcaacatgcgcacgATGCTGGTGTAGTCAGCATGTTAGAAGAGTTACCTGTGTTGTTGCTGGAGTGGACTTGTGCCACTGGACCAATGTGGCTGGATGGAGTAACCCTGGCGATGCCACTACAGGACACAGGGAACTGGGACATCATATACCTCTTCTCCCTActgacaacacaaacacacacagtcagtcatcaCACAGACACAAAACAGCATAACTGAGGGGAATATCATCACAGCCAATCAAAATAATTTGATAGGTACACAAGCAGGCGCCAGACAGCTACTATATAAGGTGAAGAAATAAGCTGGAGAGATCTTTGAGATGGTCTTTCACTAGCACTCCTGAAACCCTAGAGGATTCTCTAGTCTAGTCAACATTGCACAAGCACACCAGGGTCTGACATGCAGTAATATGTGTCTACCCCAGTCTTCACGTCACACTAATTGAACTATaaagtacatacagtgcattcggaaagaattcagaccccttccc

Function

NR:

description
zinc finger CCHC domain-containing protein 14-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU27210 True 552 lncRNA 0.46 1 23828394 23828945

Neighbor

gene id symbol gene type direction distance location
LOC110511247 LOC106573632 coding upstream 6040 23805014 ~ 23822354 (+)
LOC110511054 NA coding upstream 36835 23787493 ~ 23793379 (+)
LOC110510174 LOC106573623 coding upstream 959015 22713674 ~ 22869379 (+)
LOC110513869 LOC106560949 coding upstream 1204952 22620666 ~ 22623478 (+)
zgc:110339 LOC106573615 coding upstream 1393244 22432310 ~ 22435150 (+)
LOC110511358 LOC106573633 coding downstream 43969 23872914 ~ 23905175 (+)
LOC110512398 LOC106573641 coding downstream 256724 24085669 ~ 24091336 (+)
LOC110512529 LOC106573640 coding downstream 276401 24105346 ~ 24114557 (+)
LOC110513011 LOC106573643 coding downstream 298956 24127901 ~ 24151730 (+)
LOC110513138 fa2h coding downstream 343210 24172155 ~ 24207840 (+)
G23580 NA non-coding upstream 27984 23799950 ~ 23800410 (+)
G23568 NA non-coding upstream 46553 23781559 ~ 23781841 (+)
G23565 NA non-coding upstream 50839 23777297 ~ 23777555 (+)
G23564 NA non-coding upstream 51416 23776764 ~ 23776978 (+)
G23594 NA non-coding downstream 838 23829783 ~ 23830014 (+)
G23597 LOC106573631 non-coding downstream 3011 23831956 ~ 23832268 (+)
G23599 NA non-coding downstream 7215 23836160 ~ 23836387 (+)
G23602 NA non-coding downstream 11322 23840267 ~ 23840488 (+)
G23605 NA non-coding downstream 13852 23842797 ~ 23843097 (+)
G23135 NA other upstream 253399 23574592 ~ 23574995 (+)
G23109 NA other upstream 289531 23538396 ~ 23538863 (+)
G20773 NA other upstream 2260206 21567545 ~ 21568188 (+)
G19400 NA other upstream 3518496 20309425 ~ 20309898 (+)
G19380 LOC100194703 other upstream 3551499 20276590 ~ 20276895 (+)
ccl4 ccl4 other downstream 675710 24504638 ~ 24506125 (+)
G24123 NA other downstream 721580 24550525 ~ 24552435 (+)
G24295 NA other downstream 1011040 24839985 ~ 24840462 (+)
G24307 NA other downstream 1027999 24856944 ~ 24857251 (+)

Expression


Co-expression Network