Gene
RNA
| Item | Value |
|---|---|
| gene id | G19400 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 20309425 ~ 20309898 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| phosphatidylinositol 4-phosphate 5-kinase type-1 gamma-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU22579 | False | 474 | TUCP | 0.38 | 1 | 20309425 | 20309898 |
| TU22577 | True | 382 | lncRNA | 0.45 | 1 | 20309517 | 20309898 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505394 | LOC106573573 | coding | upstream | 108951 | 20197087 ~ 20200566 (+) |
| LOC110532018 | LOC106573567 | coding | upstream | 215570 | 19977844 ~ 20093947 (+) |
| LOC110504002 | LOC106573565 | coding | upstream | 403306 | 19901680 ~ 19906211 (+) |
| LOC110503939 | LOC106573564 | coding | upstream | 443898 | 19863734 ~ 19865619 (+) |
| LOC110503761 | NA | coding | upstream | 454479 | 19850483 ~ 19855038 (+) |
| LOC110506010 | polr2e | coding | downstream | 8850 | 20318748 ~ 20321068 (+) |
| LOC110532051 | NA | coding | downstream | 198207 | 20508105 ~ 20522381 (+) |
| LOC110506309 | hpln4 | coding | downstream | 218387 | 20528285 ~ 20565572 (+) |
| borcs8 | borcs8 | coding | downstream | 613082 | 20922980 ~ 20931337 (+) |
| mef2b | mef2b | coding | downstream | 640209 | 20950107 ~ 20983313 (+) |
| G19399 | NA | non-coding | upstream | 134 | 20309171 ~ 20309383 (+) |
| G19393 | NA | non-coding | upstream | 13439 | 20295780 ~ 20296078 (+) |
| G19390 | NA | non-coding | upstream | 19046 | 20290262 ~ 20290471 (+) |
| G19389 | NA | non-coding | upstream | 20483 | 20288810 ~ 20289034 (+) |
| G19386 | NA | non-coding | upstream | 25494 | 20283789 ~ 20284023 (+) |
| G19412 | LOC106573580 | non-coding | downstream | 27096 | 20336994 ~ 20337850 (+) |
| G19434 | LOC106573581 | non-coding | downstream | 64750 | 20374648 ~ 20375083 (+) |
| G19496 | NA | non-coding | downstream | 155392 | 20465290 ~ 20516818 (+) |
| G19526 | NA | non-coding | downstream | 209559 | 20519457 ~ 20524897 (+) |
| G19622 | NA | non-coding | downstream | 385202 | 20695100 ~ 20695539 (+) |
| G19380 | LOC100194703 | other | upstream | 32622 | 20276590 ~ 20276895 (+) |
| G19359 | NA | other | upstream | 66642 | 20242645 ~ 20242875 (+) |
| G19083 | NA | other | upstream | 393685 | 19915586 ~ 19915832 (+) |
| LOC110502506 | LOC106573550 | other | upstream | 734489 | 19568684 ~ 19575028 (+) |
| G20773 | NA | other | downstream | 1257647 | 21567545 ~ 21568188 (+) |
| G23109 | NA | other | downstream | 3228498 | 23538396 ~ 23538863 (+) |
| G23135 | NA | other | downstream | 3264694 | 23574592 ~ 23574995 (+) |
| LOC110511358 | LOC106573633 | other | downstream | 3563123 | 23872914 ~ 23905175 (+) |
| ccl4 | ccl4 | other | downstream | 4194757 | 24504638 ~ 24506125 (+) |
