G19390


Basic Information

Item Value
gene id G19390
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 20290262 ~ 20290471 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU22566
gtgtggacaggtgtcttttatacaggtaacgagttcaaataggtgcagttaatacaggtaatgagtggagaacaggagggattcttaaagaaaaactaacagatcTGTGAGAGACGggattcttactggttggtaggtgatcaaatacttatgtcatgcaataaaatgtaaatgaattacttaaaaatcatacaatgtgattttcgtttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22566 True 210 lncRNA 0.44 1 20290262 20290471

Neighbor

gene id symbol gene type direction distance location
LOC110505394 LOC106573573 coding upstream 89696 20197087 ~ 20200566 (+)
LOC110532018 LOC106573567 coding upstream 196315 19977844 ~ 20093947 (+)
LOC110504002 LOC106573565 coding upstream 384051 19901680 ~ 19906211 (+)
LOC110503939 LOC106573564 coding upstream 424643 19863734 ~ 19865619 (+)
LOC110503761 NA coding upstream 435224 19850483 ~ 19855038 (+)
LOC110506010 polr2e coding downstream 28277 20318748 ~ 20321068 (+)
LOC110532051 NA coding downstream 217634 20508105 ~ 20522381 (+)
LOC110506309 hpln4 coding downstream 237814 20528285 ~ 20565572 (+)
borcs8 borcs8 coding downstream 632509 20922980 ~ 20931337 (+)
mef2b mef2b coding downstream 659636 20950107 ~ 20983313 (+)
G19389 NA non-coding upstream 1228 20288810 ~ 20289034 (+)
G19386 NA non-coding upstream 6239 20283789 ~ 20284023 (+)
G19376 NA non-coding upstream 23220 20266817 ~ 20267042 (+)
G19375 NA non-coding upstream 24514 20265467 ~ 20265748 (+)
G19374 NA non-coding upstream 26281 20263737 ~ 20263981 (+)
G19393 NA non-coding downstream 5309 20295780 ~ 20296078 (+)
G19399 NA non-coding downstream 18700 20309171 ~ 20309383 (+)
G19400 NA non-coding downstream 19046 20309425 ~ 20309898 (+)
G19412 LOC106573580 non-coding downstream 46523 20336994 ~ 20337850 (+)
G19434 LOC106573581 non-coding downstream 84177 20374648 ~ 20375083 (+)
G19380 LOC100194703 other upstream 13367 20276590 ~ 20276895 (+)
G19359 NA other upstream 47387 20242645 ~ 20242875 (+)
G19083 NA other upstream 374430 19915586 ~ 19915832 (+)
LOC110502506 LOC106573550 other upstream 715234 19568684 ~ 19575028 (+)
G20773 NA other downstream 1277074 21567545 ~ 21568188 (+)
G23109 NA other downstream 3247925 23538396 ~ 23538863 (+)
G23135 NA other downstream 3284121 23574592 ~ 23574995 (+)
LOC110511358 LOC106573633 other downstream 3582550 23872914 ~ 23905175 (+)

Expression


Co-expression Network